NO05G04110, NO05G04110 (gene) Nannochloropsis oceanica

Overview
NameNO05G04110
Unique NameNO05G04110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1485
Alignment locationchr5:1056059..1057543 -

Link to JBrowse

Properties
Property NameValue
DescriptionHeat shock protein 70
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1056059..1057543 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
GO:0005575cellular_component
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005515protein binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR002777PFD_beta-like
IPR019734TPR_repeat
Homology
BLAST of NO05G04110 vs. NCBI_GenBank
Match: OQR88029.1 (hypothetical protein ACHHYP_07687 [Achlya hypogyna])

HSP 1 Score: 117.1 bits (292), Expect = 8.500e-23
Identity = 78/204 (38.24%), Postives = 111/204 (54.41%), Query Frame = 0
Query:   18 AEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGRGMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISEETRLFNSVGKMFV-LTPRAQV 221
            AE++KNLGN+ + AK YD+AI  YSEAI L P++HIYYSNRSA +GA   W  A  DAK C+  +P+F KG  RL  AQ ++   D A+ T+ A     P   +  KQ   + A  Q                    +EL E+Q Q+   ++EL+ + +K  A S EK+R  L   EL  + + T  + ++GKMF+ +TP   V
Sbjct:   13 AEQEKNLGNEEFNAKNYDQAIVHYSEAIRLAPNNHIYYSNRSAAYGAINKWEQAEQDAKECVRLNPSFKKGLLRLANAQRQLGKNDEAVATM-ALANGGPAPTKRAKQETALPASVQ--------------------KELQELQPQFQTLHRELETIEAKLGAFSREKKRIHLTKEELGALPQGTHTYAAIGKMFLEMTPEENV 195          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: OQS07804.1 (hypothetical protein THRCLA_00201 [Thraustotheca clavata])

HSP 1 Score: 113.6 bits (283), Expect = 9.400e-22
Identity = 73/196 (37.24%), Postives = 112/196 (57.14%), Query Frame = 0
Query:   18 AEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGRGMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISEETRLFNSVGKMFV 214
            AEE+K+LGN+ + AK YD+AI  YSEAI L P++HIYYSNRSA +GA   W  A  DAK C+  +P+F KG  RL  AQ ++   + A+ T+                     AKK A    +  +++G+    +  +EL E+Q Q+ + ++EL+ + +K  A S EK+R +L   EL  + + T  + ++GKMF+
Sbjct:    5 AEEEKSLGNEEFNAKNYDQAIMHYSEAIRLSPNNHIYYSNRSAAYGAINKWEKAEEDAKECVRLNPSFKKGLLRLANAQRQLGKNEEAMATMALA------------NGGAAPAKKAAP---KQENAAGALPASVQ-KELQELQPQFQSLHRELETIEAKLGAYSREKKRIQLTKDELGALPKGTHTYAALGKMFL 184          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: XP_009822491.1 (hypothetical protein H257_01134 [Aphanomyces astaci] >ETV87628.1 hypothetical protein H257_01134 [Aphanomyces astaci])

HSP 1 Score: 112.5 bits (280), Expect = 2.100e-21
Identity = 73/204 (35.78%), Postives = 110/204 (53.92%), Query Frame = 0
Query:   18 AEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGRGMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISEETRLFNSVGKMFV-LTPRAQV 221
            AE +KNLGN+ + AK Y++AI  Y++AI+L P +HI+YSNRSA +GA  +W  A ADA+ C   +P+F KG  RL  AQ ++   +AA+ T                   +  A        R    S +       +EL E+Q Q+ + ++EL+ + SK  A   EK+R +L   EL ++   TR + S+GKMF+ +TP   V
Sbjct:    5 AENEKNLGNEEFNAKNYEQAIHHYTQAIKLAPTNHIFYSNRSAAYGALNNWEKAEADAQECARLNPSFKKGLLRLANAQRQLGKNEAAMAT-------------------MALANGGGVPAKRAKQESAAPLPSSVQKELQELQPQFQSLHRELETIDSKLGAYGREKKRIQLTKEELGELPTGTRTYASIGKMFLEMTPEENV 189          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: XP_008861526.1 (hypothetical protein H310_00490 [Aphanomyces invadans] >ETW10115.1 hypothetical protein H310_00490 [Aphanomyces invadans])

HSP 1 Score: 111.7 bits (278), Expect = 3.600e-21
Identity = 76/201 (37.81%), Postives = 112/201 (55.72%), Query Frame = 0
Query:   18 AEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIK-AGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGRGMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISEETRLFNSVGKMFV-LTP 217
            AE +KNLGN+ + AK Y++AI  YSEAI+L P +HI+YSNRSA +GA  +W  A ADAK C   +P+F KG  RL  AQ ++   + A+ T+  A     P     Q+    + A  Q                    +EL E+Q Q+ + ++EL+ + SK  A   EK+R +L   EL+++   TR + S+GKMF+ +TP
Sbjct:    5 AELEKNLGNEEFNAKNYEQAIHHYSEAIKLAPTNHIFYSNRSAAYGALNNWEKAEADAKECARLNPSFKKGLLRLANAQRQLGKNEEAMATMALANGGGVPAKRSKQEAAASLPASVQ--------------------KELQELQPQFQSLHRELETIDSKLGAYGREKKRIQLTKEELAELPTGTRTYASIGKMFMEMTP 185          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: CBN75252.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 111.3 bits (277), Expect = 4.700e-21
Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 0
Query:   11 SGTDKTGAEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQP 118
            S  +K  AE K+  GN A+  K  DEA+  YSEAIELDP S+IY SNRSAC+  +G    A  +A+ C+  +P+F KGYYRL  AQ EM + DAALET+KAGL R P
Sbjct:    4 SEENKAIAEAKRKAGNDAFAKKDLDEAVRLYSEAIELDPSSYIYRSNRSACYALQGKHEMAKEEAEACIKINPDFTKGYYRLATAQTEMGEMDAALETVKAGLGRDP 110          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: XP_024575852.1 (small glutamine rich tetratricopeptide repeat-containing partial [Plasmopara halstedii] >CEG39483.1 small glutamine rich tetratricopeptide repeat-containing partial [Plasmopara halstedii])

HSP 1 Score: 110.9 bits (276), Expect = 6.100e-21
Identity = 71/205 (34.63%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   18 AEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGRGMS-------GEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISEETRLFNSVGKMFVLT 216
            AE +K LGN+ +  K + +A+  YSEAI L+ ++++YYSNRSA +GA G+W  A  DA+ C+ ++P F KGY+RL  AQ ++     A+ET+K  L    +  ++    +L++   +       T SS S+ +G+S        +EL E+Q Q+     E  ++ +K  A S +K+R  L   EL  + E  + + S+GKMF+ T
Sbjct:    7 AEVQKTLGNEEFNHKNFSKAVECYSEAIRLNSNNYVYYSNRSAAYGAMGNWELAEKDAQECVKRNPTFAKGYHRLANAQQQLGRKKEAIETLKIALTAASNPDKVPGIKKLLRQLNEEV-----TLSSTSSPQGVSRQVPAHVAKELQELQPQFQKIQHESDQIEAKLAAFSRQKKRLALVERELIDLPEGIKTYRSIGKMFMQT 206          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: ESK95524.1 (hsc70 cochaperone [Moniliophthora roreri MCA 2997])

HSP 1 Score: 110.5 bits (275), Expect = 7.900e-21
Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    2 SSMETSDSSSGTDKTGAEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAK 133
            SS  +    S  DK  AEE K  GN    +KKYDEAI  Y EAI LD  + IYYSNR+A + +KGD  SA  DA++ L  DPNF+K Y+RL  AQ  + DF AA +  + GLK  P+NA L+  L+  KA+
Sbjct:   86 SSTPSQTGPSAQDKAKAEEFKAKGNSLMSSKKYDEAIAAYGEAITLDSTNPIYYSNRAAAYSSKGDHLSAIGDAELALASDPNFVKAYHRLGHAQYCLSDFKAAADAFERGLKLDPNNAGLKSGLQNAKAR 216          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: KTB31678.1 (hypothetical protein WG66_15734 [Moniliophthora roreri])

HSP 1 Score: 110.5 bits (275), Expect = 7.900e-21
Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    2 SSMETSDSSSGTDKTGAEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAK 133
            SS  +    S  DK  AEE K  GN    +KKYDEAI  Y EAI LD  + IYYSNR+A + +KGD  SA  DA++ L  DPNF+K Y+RL  AQ  + DF AA +  + GLK  P+NA L+  L+  KA+
Sbjct:   86 SSTPSQTGPSAQDKAKAEEFKAKGNSLMSSKKYDEAIAAYGEAITLDSTNPIYYSNRAAAYSSKGDHLSAIGDAELALASDPNFVKAYHRLGHAQYCLSDFKAAADAFERGLKLDPNNAGLKSGLQNAKAR 216          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: SJL06033.1 (uncharacterized protein ARMOST_09369 [Armillaria ostoyae])

HSP 1 Score: 106.3 bits (264), Expect = 1.500e-19
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 0
Query:   14 DKTGAEEKKNLGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAGLKRQPDNAELQKQLRLVKAK 133
            DK  AE+ K  GN    AKKYDEAI  Y++AI LDP + IYYSNR+A H +KGD  SA  DA+  +  DP ++K Y+RL  AQ  + D+ AA +  + GLK +P+N  L+  L+  K++
Sbjct:  103 DKAKAEKLKQAGNSQMTAKKYDEAIASYNDAIALDPVNPIYYSNRAAAHSSKGDHLSAVGDAEKAISVDPKYVKSYHRLGHAQYALLDYKAAADAFERGLKIEPNNVSLKTGLQSSKSR 221          
BLAST of NO05G04110 vs. NCBI_GenBank
Match: KUF96058.1 (PAX-interacting protein 1 [Phytophthora nicotianae])

HSP 1 Score: 104.4 bits (259), Expect = 5.700e-19
Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 0
Query:   24 LGNKAYMAKKYDEAITRYSEAIELDPDSHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMKDFDAALETIKAG------LKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGRGMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISEETRLFNSVGKMFVLTPRAQVLSQLE 226
            LGN+ +  K +D+AI  YSEAI L PD+H+YYSNRSA +GA G W  A  DA+ C+ ++P F KGY+RL  AQ ++     A+ET+K          + P   +L +QL    A K AA     T   G        +EL E+Q Q+            K   ASG +R      +   + +E T+ + S+GKMF+ T   + ++ L+
Sbjct:   10 LGNEEFNEKNFDKAIECYSEAIRLGPDNHVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKKEAIETLKTAQTTATDTDKVPGIKKLLRQLNQEVAPKSAAS----TQGGGRQVPMHVAKELQELQPQF-----------QKIQQASGSRR------ARGGRPAEGTKTYRSIGKMFLQTDSEENVATLK 196          
The following BLAST results are available for this feature:
BLAST of NO05G04110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQR88029.18.500e-2338.24hypothetical protein ACHHYP_07687 [Achlya hypogyna... [more]
OQS07804.19.400e-2237.24hypothetical protein THRCLA_00201 [Thraustotheca c... [more]
XP_009822491.12.100e-2135.78hypothetical protein H257_01134 [Aphanomyces astac... [more]
XP_008861526.13.600e-2137.81hypothetical protein H310_00490 [Aphanomyces invad... [more]
CBN75252.14.700e-2154.21conserved unknown protein [Ectocarpus siliculosus][more]
XP_024575852.16.100e-2134.63small glutamine rich tetratricopeptide repeat-cont... [more]
ESK95524.17.900e-2148.09hsc70 cochaperone [Moniliophthora roreri MCA 2997][more]
KTB31678.17.900e-2148.09hypothetical protein WG66_15734 [Moniliophthora ro... [more]
SJL06033.11.500e-1946.22uncharacterized protein ARMOST_09369 [Armillaria o... [more]
KUF96058.15.700e-1935.10PAX-interacting protein 1 [Phytophthora nicotianae... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003446NSK003446Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04110.1NO05G04110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|401049gene_3221Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g57gene2571Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04110.1NO05G04110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04110 ID=NO05G04110|Name=NO05G04110|organism=Nannochloropsis oceanica|type=gene|length=1485bp
GTGGGGTCGTGGTGTGGAGAGCAGAATGAGGAGAGACTGGGATAAGAGGA
CTTCATGAAAGAGGCAACTCTATACGAGTGCGTGTGTTCATCTTGAGGGT
CAAGTGCTTGGTTGTCGAGTGGGTTTATTTAGACATCAGCCCCCTTCTGG
CTTCTCCTCGCTTCCTCTCGCCGTCAACCACAGCGCCCTAGTACGACCTG
GGCGTGTCCTCTCACAGAGCCACGAACTCTGCGAATTAACTTTGCAAGCG
CCGGCACAATTCACTTGTGATTGCATCCTCATCCTATTCGTATTATCCCT
GGCAATTGGTGCATGCGCTTTGAGGGCGTAGGGTGAAAGTGCCTCGTGCG
ACGCCCAAGAGCATTCTGTGAGATCCTTTTACTGCCCTTGCTCACCAACC
TCATACACTCCTTGAACGCAGGTTCATCAACATGAGCAGCATGGAAACAA
GCGACTCCAGCAGCGGGACTGACAAGACGGGTGCGGAAGAAAAGAAAAAg
taagccccccccccccgtcttcaattaaatttgttctaccctagttcctc
ccctacctccctcctccctctttttcgcagctctccatccacccgaccgc
atccaaccgcacccctataaaaaccaaattagTCTAGGCAACAAGGCATA
CATGGCCAAGAAGTATGACGAAGCTATCACACGGTACAGTGAGGCCATCG
AGCTCGATCCCGACAGCCACATTTACTATTCCAATCGCAGCGCATGCCAT
GGGGCCAAGGGCGACTGGGCTTCGGCCGCCGCGGACGCCAAAATCTGTCT
TGGCAAGGACCCGAATTTCTTGAAGGGATACTATCGCTTGACAATGGCAC
AGATGGAAATGAAGGATTTTGACGCGGCCTTGGAGACGATCAAGGCAGGG
TTGAAACGACAGCCTGACAATGCGGAGCTCCAAAAGCAACTCCGATTGGT
CAAAGCCAAGAAGCAAGCAGCGGATTATGTGCGGCATACCGATAGCAGTG
GATCAGCGGGGCGAGGTATGTCAGGGGAGGAGCTGGCGGAGGTGCAGGAG
CAGTACATTGCTGCAAACAAGGAATTGAAAGAAGTACGGTCCAAGGGCGT
GGCGGCCTCGGGAGAGAAGCGACGGAACGAACTGTGCTTGTCCGAGTTAA
GCAAGATATCGGAGGAGACAAGGTTGTTTAATTCGGTAGGGAAAATGTTC
GTACTGACGCCGCGTGCACAAGTGTTGAGTCAGTTGGAGAGGTGCGTGGC
CGAGGCGGAGCAGCGGGCTACAGATTTGGAAGCACGACATGCGTACCTAG
AAGCAAAGATCTCGTCGCACGAAGCGATATTGAAGGAGGCATCCAAGGCA
GGCGGGGCATCGGCTTGACGATTGGCCGGGGGAGGAGGATAATCCCAACG
AGTAATGTTTTGAGAGATGGAAAGTGTCCGAATGACGAAAAGGAAGACGA
AAGAATTCCTGGTACTCTTATTGCTTAAGTATTGC
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protein sequence of NO05G04110.1

>NO05G04110.1-protein ID=NO05G04110.1-protein|Name=NO05G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=268bp
MSSMETSDSSSGTDKTGAEEKKNLGNKAYMAKKYDEAITRYSEAIELDPD
SHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMK
DFDAALETIKAGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGR
GMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISE
ETRLFNSVGKMFVLTPRAQVLSQLERCVAEAEQRATDLEARHAYLEAKIS
SHEAILKEASKAGGASA*
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Synonyms
Publications