NO05G04000, NO05G04000 (gene) Nannochloropsis oceanica

Overview
NameNO05G04000
Unique NameNO05G04000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1266
Alignment locationchr5:1033841..1035106 +

Link to JBrowse

Properties
Property NameValue
DescriptionMannitol 2-dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1033841..1035106 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089276-PGluconate_DH_C-like
IPR036291NAD(P)-bd_dom_sf
IPR013118Mannitol_DH_C
Homology
BLAST of NO05G04000 vs. NCBI_GenBank
Match: EWM27932.1 (hypothetical protein Naga_100008g47 [Nannochloropsis gaditana])

HSP 1 Score: 612.1 bits (1577), Expect = 1.300e-171
Identity = 304/406 (74.88%), Postives = 348/406 (85.71%), Query Frame = 0
Query:    1 MEPFA-GADLSDASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAE---LQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVLPPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASIEAKGLPGPAFAFAVAAMLRFLTPLGAQPRFAQNVFKGEMDDLPVCQ 403
            MEP   G+ L++ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSF SMMYGPR++ G+YEVDTVEFDGR LT++H ++AAGTLG AEGQ AW +LPAQLP+LRVIGVGVTEAGLA G+ AMKDL +FL+ACFKA++QGPLS+INTDN+PGNGPKI +FVT+P  L++   L +  +E E FL +L +KVVFHSTMVDRITSQR G+GDVPRAEPLP KALVIEDL  VLP +L++APGVV+RR AGEIE+DH LKLR+ANAIHTAMVYCMAL RM DTSACIG+PLI+PYI  LY+QDI+  + + G+P  EVQ+VYDDWVRRLQHPQFGL CLFV QNASQKLG+RLLPTI ASI+A GLPGPAFAFAVAAMLRFLTP G QPR A NVF G MD  P  Q
Sbjct:    1 MEPLTRGSSLAEASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFLSMMYGPRRSKGSYEVDTVEFDGRTLTTSHPIIAAGTLGTAEGQKAWAALPAQLPHLRVIGVGVTEAGLAPGTAAMKDLCQFLYACFKADIQGPLSIINTDNVPGNGPKIRSFVTEPTQLSKVTALPETSKEMEDFLSFLDNKVVFHSTMVDRITSQRVGDGDVPRAEPLPTKALVIEDLGNVLPAALEEAPGVVIRRTAGEIEIDHSLKLRVANAIHTAMVYCMALSRMPDTSACIGHPLIMPYIQALYEQDIVRMT-SMGIPLAEVQSVYDDWVRRLQHPQFGLGCLFVSQNASQKLGLRLLPTIRASIDAVGLPGPAFAFAVAAMLRFLTPCGPQPRLAPNVFMGSMDPKPQAQ 405          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: KOO53431.1 (hypothetical protein Ctob_015329 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 358.6 bits (919), Expect = 2.600e-95
Identity = 200/396 (50.51%), Postives = 255/396 (64.39%), Query Frame = 0
Query:   12 ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYG--PRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKAN--VQGP-LSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVLPPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACI-GNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASIEAKGLPGPAFAFAVAAMLRFLTPLGAQPRFAQN--VFKGEMDDLP 400
            +S VC+G+GRFLRAVLVPA+   G   I+ QTRG SF   M       A   YE+DTV  DG  LT+ H + A G+LG AEG+AA+++LPA+L  LR IG+GVTEAG+     +M  LA FL AC+ A     GP LS+INTDN+P NG ++   V    +  +  QA+ + EAF  +L   V FH+TMVDRITSQR G  +VPRAEPLP KA+VIEDL GVLP  L   PG+  R    ++ +D QLKLR+AN +H+AMVY MALGR   T  C   N  ILPY+  L+++D++  +   G  +  V  VY +W+ RLQH  FGL C FV QNA QKLGIRLLP+I A++ A   P    AF++AAMLRFLTP+G Q R  +   VF G +DD P
Sbjct:   20 SSAVCIGTGRFLRAVLVPALHELGCDVILAQTRGQSFGQYMQKRLDEDAGPKYELDTVLQDGSTLTTLHPITACGSLGAAEGRAAFMALPAKLKKLRFIGLGVTEAGITHNGSSMLALAEFLHACYHAGRAEDGPQLSIINTDNLPFNGDEVRAHV----LSCDFTQAQPDAEAFGAWLARCVCFHNTMVDRITSQREGCPEVPRAEPLPYKAIVIEDLQGVLPAGLSTVPGLAARTQPNQLALDIQLKLRVANGLHSAMVYAMALGRQPTTDLCAQTNSPILPYLEQLFERDVVHMTSELGCERAVVTPVYTEWMTRLQHRHFGLCCFFVSQNAMQKLGIRLLPSIKATLLAAEAPSDFMAFSIAAMLRFLTPMGEQTRLGEGRPVFVGNLDDSP 411          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: OQR81671.1 (hypothetical protein THRCLA_11522 [Thraustotheca clavata])

HSP 1 Score: 338.2 bits (866), Expect = 3.700e-89
Identity = 200/405 (49.38%), Postives = 246/405 (60.74%), Query Frame = 0
Query:    1 MEPFAGADLSDASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVLPPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASIEAKG--LPGPAFAFAVAAMLRFLTPLGAQPRFAQN---VFKGEMDDLPV 401
            M+      L D   +CLGSGRFLRAVLVPA        IV QTRG  F     G   A GTYEVDTV+ +G + T    + A GTLG +EG+ A+L LP +L NL+ IGVGVTE+G+   S+AMKDLA FL  C +A     LSVINTDN+P NG  I   V        L+    E ++   Y+   VVFH+TMVDRIT+ R GN  VP AEPLP K LVIEDL G         PGVV+R  AGE+  DH LKL IANAIHTAMVY +AL R ++T  C  +PL+  YIH L+ +DI P + T  +P+  VQ+VYD+W++RL HP FG+   FVCQNA  KL IRL P+I A +       P P F+FAVA +LRFLTP     +   +    F+G MD L V
Sbjct:    1 MQFHVNGPLEDVQAICLGSGRFLRAVLVPAFRYLNYGVIVAQTRGRDFVDACLG---AKGTYEVDTVDINGDITTDIVQLAAVGTLGTSEGRTAFLQLPFKLCNLQYIGVGVTESGIHPESLAMKDLAAFLTECSQALPDAKLSVINTDNVPANGDMIKKCV--------LKYCSSEVKS---YVNKNVVFHNTMVDRITAARPGNTLVPYAEPLPAKVLVIEDL-GKTLTHWHVVPGVVLRHTAGELSNDHLLKLGIANAIHTAMVYYLALSRKTNTKTCAHDPLLKQYIHELFVRDIKP-ALTLKIPEIAVQSVYDEWIQRLLHPYFGMDTFFVCQNAFAKLKIRLWPSITAQLNTNPSYQPSPMFSFAVALILRFLTPTPHSKKQDSDRGLTFEGSMDALSV 389          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: XP_009533354.1 (hypothetical protein PHYSODRAFT_347522 [Phytophthora sojae] >EGZ10609.1 hypothetical protein PHYSODRAFT_347522 [Phytophthora sojae])

HSP 1 Score: 323.2 bits (827), Expect = 1.200e-84
Identity = 185/406 (45.57%), Postives = 247/406 (60.84%), Query Frame = 0
Query:    2 EPFAG-ADLSDAS-CVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVLPPS-LDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASIEAKGL--PGPAFAFAVAAMLRFLTPLGAQPR----FAQNVFKGEMDDL 399
            +P  G A  SD++  +C+GSGRFLR VLVP + AAG   ++ QTRG SF S      KA G+YEVDT++ DG V T    V A G+LG+AEG+ A++ LPA+LP L+ IG GVTE+G+  G  A+ DL   LF  F+A     LSV+NTDN+P NG  I   V +     +      +   F  Y+++KV FH+TMVDR+TS RAG+  VP  EP P K L+IEDL GVL    L   PGV +R  AG++E DH LKL IANA+HTAMVY +AL R+  TS  +  P I  ++  LY +DI P+    GV +EE Q  YD+W+ R++H  FGL   +V QNA  K G+RL  ++ A++++  +  P    AFA A  LR+LTP  A  R       +VF G MD +
Sbjct:   58 QPLRGQATFSDSTDAICIGSGRFLRCVLVPTLRAAGSSVVMAQTRGTSFASAC---AKAEGSYEVDTIQKDGSVQTEVVQVDAVGSLGDAEGRKAFMQLPAKLPKLKFIGFGVTESGIVKGGPAIVDLTELLFYSFQARPDAVLSVVNTDNLPKNGDAIKKLVLE----TQWPGQPGDLAPFHAYVETKVHFHNTMVDRLTSHRAGDALVPLTEPWPTKTLIIEDLHGVLDAKVLSALPGVHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTSEVLKIPEIRQFLDLLYAKDIAPSLVARGVSKEEAQHTYDEWMARVEHEHFGLDNFWVGQNAMLKFGVRLFSSVEANVKSDAMYRPSVFMAFATAVSLRYLTPTQADSRKEDGSGPSVFVGAMDSI 456          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: ETP29635.1 (hypothetical protein F442_21221 [Phytophthora parasitica P10297])

HSP 1 Score: 319.7 bits (818), Expect = 1.400e-83
Identity = 182/403 (45.16%), Postives = 238/403 (59.06%), Query Frame = 0
Query:    3 PFAGADLSD-ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVL-PPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASI--EAKGLPGPAFAFAVAAMLRFLTPLGAQPR---FAQNVFKGEMDDL 399
            P  G   SD    +C+GSGRFLR VLVP + AAG   +V QTRG SF S      KA G YEVDT++ DG V T    V A G+LG+AEG+AA++ LP++L  L+ IG GVTE+G+  G  A+ DL   L+ CF       +SVINTDN+P NG  I + V       E +    +   F  Y++S V  H+TMVDR+TS RAG+  VP  EP P K LVIEDL GVL    L   PGV +R  AG++E DH LKL IANA+HTAMVY +AL R+  T   +  P I  Y+  LY +DI P+    G+ ++EVQ  YD+W+ R++H  FGL   +V QNA  K G+RL   + A++  +    P    AFA A +LR+LTP  A  R    +  +F G MD +
Sbjct:    4 PLRGQSFSDKTDAICIGSGRFLRCVLVPTLRAAGSAVVVAQTRGTSFASAC---AKAAGKYEVDTIQKDGSVQTEIVEVEAVGSLGDAEGRAAFMQLPSKLSKLKFIGFGVTESGIVKGGPAIVDLTELLYNCFTTQPNNIISVINTDNLPKNGDTIKSLVLG----TEWKGQPSDLVPFRAYVESNVHLHNTMVDRLTSHRAGDSLVPLTEPWPTKTLVIEDLNGVLDAKKLSSLPGVHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTCDVLKYPEIRQYLDLLYAKDIAPSLELRGISKQEVQHTYDEWMARVEHKHFGLDNFWVGQNAMLKYGVRLFSNVEANVTKDKNYRPSVFMAFATALILRYLTPTQADSRKEDGSGEIFVGAMDSI 399          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: ETI31672.1 (hypothetical protein F443_21384 [Phytophthora parasitica P1569])

HSP 1 Score: 318.2 bits (814), Expect = 4.000e-83
Identity = 181/403 (44.91%), Postives = 237/403 (58.81%), Query Frame = 0
Query:    3 PFAGADLSD-ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVL-PPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASI--EAKGLPGPAFAFAVAAMLRFLTPLGAQPR---FAQNVFKGEMDDL 399
            P  G   SD    +C+GSGRFLR VLVP + AAG   +V QTRG SF S      KA G YEVDT++ DG V T    V A G+LG+AEG+AA++ LP++L  L+ IG GVTE+G+  G  A+ DL   L+ CF       +SVINTDN+P NG  I + V       E +    +   F  Y++S V  H+TMVDR+TS RAG+  VP  EP P K LVIEDL GVL    L   PGV +R  AG++E DH LKL IANA+HTAMVY +AL R+  T   +  P I  Y+  LY +DI P+    G+ ++E Q  YD+W+ R++H  FGL   +V QNA  K G+RL   + A++  +    P    AFA A +LR+LTP  A  R    +  +F G MD +
Sbjct:    4 PLRGQSFSDKTDAICIGSGRFLRCVLVPTLRAAGSAVVVAQTRGTSFASAC---AKAAGKYEVDTIQKDGSVQTEIVEVEAVGSLGDAEGRAAFMQLPSKLSKLKFIGFGVTESGIVKGGPAIVDLTELLYNCFTTQPNNIISVINTDNLPKNGDTIKSLVLG----TEWKGQPSDLVPFRAYVESNVHLHNTMVDRLTSHRAGDSLVPLTEPWPTKTLVIEDLNGVLDAKKLSSLPGVHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTCDVLKYPEIRQYLDLLYAKDIAPSLELRGISKQEAQHTYDEWMARVEHKHFGLDNFWVGQNAMLKYGVRLFSNVEANVTKDKNYRPSVFMAFATALILRYLTPTQADSRKEDGSGEIFVGAMDSI 399          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: ETO60397.1 (hypothetical protein F444_21401 [Phytophthora parasitica P1976])

HSP 1 Score: 318.2 bits (814), Expect = 4.000e-83
Identity = 181/403 (44.91%), Postives = 237/403 (58.81%), Query Frame = 0
Query:    3 PFAGADLSD-ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVL-PPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASI--EAKGLPGPAFAFAVAAMLRFLTPLGAQPR---FAQNVFKGEMDDL 399
            P  G   SD    +C+GSGRFLR VLVP + AAG   +V QTRG SF S      KA G YEVDT++ DG V T    V A G+LG+AEG+AA++ LP++L  L+ IG GVTE+G+  G  A+ DL   L+ CF       +SVINTDN+P NG  I + V       E +    +   F  Y++S V  H+TMVDR+TS RAG+  VP  EP P K LVIEDL GVL    L   PGV +R  AG++E DH LKL IANA+HTAMVY +AL R+  T   +  P I  Y+  LY +DI P+    G+ ++E Q  YD+W+ R++H  FGL   +V QNA  K G+RL   + A++  +    P    AFA A +LR+LTP  A  R    +  +F G MD +
Sbjct:    4 PLRGQSFSDKTDAICIGSGRFLRCVLVPTLRAAGSAVVVAQTRGTSFASAC---AKAAGKYEVDTIQKDGSVQTEIVEVEAVGSLGDAEGRAAFMQLPSKLSKLKFIGFGVTESGIVKGGPAIVDLTELLYNCFTTQPNNIISVINTDNLPKNGDTIKSLVLG----TEWKGQPSDLVPFRAYVESNVHLHNTMVDRLTSHRAGDSLVPLTEPWPTKTLVIEDLNGVLDAKKLSSLPGVHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTCDVLKYPEIRQYLDLLYAKDIAPSLELRGISKQEAQHTYDEWMARVEHKHFGLDNFWVGQNAMLKYGVRLFSNVEANVTKDKNYRPSVFMAFATALILRYLTPTQADSRKEDGSGEIFVGAMDSI 399          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: ETP01483.1 (hypothetical protein F441_21273 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 318.2 bits (814), Expect = 4.000e-83
Identity = 181/403 (44.91%), Postives = 237/403 (58.81%), Query Frame = 0
Query:    3 PFAGADLSD-ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVL-PPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASI--EAKGLPGPAFAFAVAAMLRFLTPLGAQPR---FAQNVFKGEMDDL 399
            P  G   SD    +C+GSGRFLR VLVP + AAG   +V QTRG SF S      KA G YEVDT++ DG V T    V A G+LG+AEG+AA++ LP++L  L+ IG GVTE+G+  G  A+ DL   L+ CF       +SVINTDN+P NG  I + V       E +    +   F  Y++S V  H+TMVDR+TS RAG+  VP  EP P K LVIEDL GVL    L   PGV +R  AG++E DH LKL IANA+HTAMVY +AL R+  T   +  P I  Y+  LY +DI P+    G+ ++E Q  YD+W+ R++H  FGL   +V QNA  K G+RL   + A++  +    P    AFA A +LR+LTP  A  R    +  +F G MD +
Sbjct:    4 PLRGQSFSDKTDAICIGSGRFLRCVLVPTLRAAGSAVVVAQTRGTSFASAC---AKAAGKYEVDTIQKDGSVQTEIVEVEAVGSLGDAEGRAAFMQLPSKLSKLKFIGFGVTESGIVKGGPAIVDLTELLYNCFTTQPNNIISVINTDNLPKNGDTIKSLVLG----TEWKGQPSDLVPFRAYVESNVHLHNTMVDRLTSHRAGDSLVPLTEPWPTKTLVIEDLNGVLDAKKLSSLPGVHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTCDVLKYPEIRQYLDLLYAKDIAPSLELRGISKQEAQHTYDEWMARVEHKHFGLDNFWVGQNAMLKYGVRLFSNVEANVTKDKNYRPSVFMAFATALILRYLTPTQADSRKEDGSGEIFVGAMDSI 399          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: XP_002903036.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56206.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 318.2 bits (814), Expect = 4.000e-83
Identity = 180/402 (44.78%), Postives = 240/402 (59.70%), Query Frame = 0
Query:    3 PFAGADLSD-ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVLPPS-LDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASI--EAKGLPGPAFAFAVAAMLRFLTPLGAQPR--FAQNVFKGEMDDL 399
            P  G   SD    +C+GSGRFLR VLVP + AAG   +V QTRG SF S      KA G YEVDT++ DG V T    V A G+LG+AEG+AA++ LP+++  L+ IG GVTE+G+  G  A+ DL   L+ CF       +SVINTDN+P NG  I   V    +  E +    +  +F  Y+ S V FH+TMVDR+TS RAG+  VP  EP P K LVIED+ GVL  + L   PG+ +R  AG++E DH LKL IANA+HTAMVY +AL R+  T   +  P I  Y+  LY  D+ P+    G+ ++E Q  YD+W+ R++H  FGL   +V QNA  K G+RL  T+ A++  + K  P    AFA A +LR+LTP  +  R     +VF G MD +
Sbjct:   23 PLRGQSFSDKTDAICIGSGRFLRCVLVPTLRAAGSAVVVAQTRGTSFASAC---AKAEGKYEVDTIQNDGSVQTEVVEVEAVGSLGDAEGRAAFMQLPSKVSKLKFIGFGVTESGIVKGGPAIVDLTELLYNCFTTQPNNIVSVINTDNLPKNGDTIKKLV----LKTEWKGQPSDLASFRAYVTSNVHFHNTMVDRLTSHRAGDSLVPLTEPWPTKTLVIEDVHGVLDANKLSVLPGLHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTCDVLKYPEIRQYLDLLYANDVAPSLELRGISKQEAQHTYDEWMSRVEHKHFGLDNFWVGQNAMLKYGVRLFSTVEANVIRDEKYRPSVFMAFATALILRYLTPTQSDSRKEDGTSVFVGAMDSI 417          
BLAST of NO05G04000 vs. NCBI_GenBank
Match: KUF80893.1 (Mannitol 2-dehydrogenase [Phytophthora nicotianae])

HSP 1 Score: 316.2 bits (809), Expect = 1.500e-82
Identity = 181/403 (44.91%), Postives = 237/403 (58.81%), Query Frame = 0
Query:    3 PFAGADLSD-ASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPSMMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPAQLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDNMPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRITSQRAGNGDVPRAEPLPKKALVIEDLTGVL-PPSLDQAPGVVVRRVAGEIEVDHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDILPTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLPTIAASI--EAKGLPGPAFAFAVAAMLRFLTPLGAQPR---FAQNVFKGEMDDL 399
            P  G   SD    +C+GSGRFLR VLVP + AAG   +V QTRG SF S      KA G YEVDT++ DG V T    V A G+LG+AEG+AA++ LP++L  L+ IG GVTE+G+  G  A+ DL   L+ CF       +SVINTDN+P NG  I + V       E +    +   F  Y++S V  H+TMVDR+TS RAG+  VP  EP P K LVIEDL GVL    L   PGV +R  AG++E DH LKL IANA+HTAMVY +AL R+  T   +    I  Y+  LY +DI P+    G+ ++EVQ  YD+W+ R++H  FGL   +V QNA  K G+RL   + A++  +    P    AFA A +LR+LTP  A  R    +  +F G MD +
Sbjct:    4 PLRGQSFSDKTDAICIGSGRFLRCVLVPTLRAAGSAVVVAQTRGTSFASAC---AKAAGKYEVDTIQKDGSVQTEIVEVEAVGSLGDAEGRAAFMQLPSKLSKLKFIGFGVTESGIVKGGPAIVDLTXLLYNCFTTQPNNIISVINTDNLPKNGDTIKSLVLG----TEWKGQPSDLVPFRAYVESNVHLHNTMVDRLTSHRAGDSLVPLTEPWPTKTLVIEDLNGVLDAKKLSSLPGVHIRTTAGQLEQDHLLKLSIANAVHTAMVYLLALTRVKTTCDVLKYXEIRQYLDLLYAKDIAPSLELRGISKQEVQHTYDEWMARVEHKHFGLDNFWVGQNAMLKYGVRLFSNVEANVTKDKNYRPSVFMAFATALILRYLTPTQADSRKEDGSGEIFVGAMDSI 399          
The following BLAST results are available for this feature:
BLAST of NO05G04000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27932.11.300e-17174.88hypothetical protein Naga_100008g47 [Nannochlorops... [more]
KOO53431.12.600e-9550.51hypothetical protein Ctob_015329 [Chrysochromulina... [more]
OQR81671.13.700e-8949.38hypothetical protein THRCLA_11522 [Thraustotheca c... [more]
XP_009533354.11.200e-8445.57hypothetical protein PHYSODRAFT_347522 [Phytophtho... [more]
ETP29635.11.400e-8345.16hypothetical protein F442_21221 [Phytophthora para... [more]
ETI31672.14.000e-8344.91hypothetical protein F443_21384 [Phytophthora para... [more]
ETO60397.14.000e-8344.91hypothetical protein F444_21401 [Phytophthora para... [more]
ETP01483.14.000e-8344.91hypothetical protein F441_21273 [Phytophthora para... [more]
XP_002903036.14.000e-8344.78conserved hypothetical protein [Phytophthora infes... [more]
KUF80893.11.500e-8244.91Mannitol 2-dehydrogenase [Phytophthora nicotianae][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003459NSK003459Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04000.1NO05G04000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584939gene_3210Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g47gene2561Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04000.1NO05G04000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04000 ID=NO05G04000|Name=NO05G04000|organism=Nannochloropsis oceanica|type=gene|length=1266bp
ATGGAGCCATTCGCAGGTGCGGATCTCTCCGATGCCTCATGCGTCTGTCT
GGGGAGTGGGCGCTTCTTGCGGGCGGTCCTGGTTCCTGCCGTGGAAGCGG
CAGGCCTCAAAAGCATTGTCTTTCAGACCCGAGGTAATTCCTTCCCTTCC
ATGATGTACGGTCCCCGCAAAGCCACTGGCACCTACGAAGTTGACACAGT
GGAATTCGATGGGCGCGTTTTAACATCTACACATTCGGTCGTGGCGGCGG
GCACATTGGGCAACGCGGAAGGTCAAGCGGCGTGGCTAAGCTTGCCTGCA
CAATTGCCGAATCTGCGGGTCATCGGCGTGGGTGTGACCGAGGCAGGGCT
GGCTTCAGGCTCGGTTGCCATGAAGGACTTGGCTCGGTTTCTGTTTGCTT
GCTTCAAGGCTAACGTGCAAGGGCCTTTGAGCGTTATCAACACGGACAAT
ATGCCTGGCAATGGCCCCAAGATTCATACCTTTGTGACGGACCCGGCTGT
CCTTGCCGAGTTGCAGCAAGCAGAGGAAGAAAGAGAAGCTTTCCTGAGGT
ATCTTCAAAGCAAGGTTGTGTTCCATAGTACCATGGTCGATCGCATAACT
TCTCAACGGGCTGGTAATGGCGACGTGCCTCGCGCGGAGCCCCTGCCGAA
GAAGGCTTTGGTCATCGAGGATCTTACAGGCGTCCTCCCTCCCTCCCTCG
ACCAGGCCCCTGGGGTGGTGGTACGACGGGTGGCCGGCGAGATTGAGGTA
GACCACCAATTGAAACTCCGGATTGCGAATGCCATTCATACCGCGATGGT
CTATTGTATGGCTCTGGGGCGGATGTCCGACACCTCGGCCTGTATTGGGA
ACCCATTGATCTTACCATACATTCACACGTTGTACCAACAAGATATTTTG
CCGACGTCACGCACAAGTGGAGTCCCTCAAGAAGAAGTCCAAGCCGTGTA
TGATGACTGGGTTCGGCGTTTGCAACACCCCCAATTCGGTCTCAGCTGCT
TGTTTGTATGTCAGAATGCCTCGCAAAAGCTGGGGATTCGTCTTCTGCCT
ACTATCGCCGCTTCCATCGAAGCCAAAGGACTTCCGGGACCGGCTTTTGC
TTTCGCCGTTGCAGCCATGCTGAGATTTTTGACCCCCTTGGGAGCGCAGC
CAAGGTTTGCGCAGAACGTGTTTAAAGGGGAAATGGATGATTTGCCTGTG
TGCCAGGATGTGGGTCATGTTGAGGAGGGGGGGGGAGCAGTGGCAGCGGC
AGTAGCAAGAGGATAA
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protein sequence of NO05G04000.1

>NO05G04000.1-protein ID=NO05G04000.1-protein|Name=NO05G04000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bp
MEPFAGADLSDASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFPS
MMYGPRKATGTYEVDTVEFDGRVLTSTHSVVAAGTLGNAEGQAAWLSLPA
QLPNLRVIGVGVTEAGLASGSVAMKDLARFLFACFKANVQGPLSVINTDN
MPGNGPKIHTFVTDPAVLAELQQAEEEREAFLRYLQSKVVFHSTMVDRIT
SQRAGNGDVPRAEPLPKKALVIEDLTGVLPPSLDQAPGVVVRRVAGEIEV
DHQLKLRIANAIHTAMVYCMALGRMSDTSACIGNPLILPYIHTLYQQDIL
PTSRTSGVPQEEVQAVYDDWVRRLQHPQFGLSCLFVCQNASQKLGIRLLP
TIAASIEAKGLPGPAFAFAVAAMLRFLTPLGAQPRFAQNVFKGEMDDLPV
CQDVGHVEEGGGAVAAAVARG*
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Synonyms
Publications