NO05G03860, NO05G03860 (gene) Nannochloropsis oceanica

Overview
NameNO05G03860
Unique NameNO05G03860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1122
Alignment locationchr5:1000377..1001498 -

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Properties
Property NameValue
DescriptionUbiquinone biosynthesis protein mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1000377..1001498 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006744ubiquinone biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR012762Ubiq_biosynth_COQ9
IPR013718COQ9
Homology
BLAST of NO05G03860 vs. NCBI_GenBank
Match: EWM27936.1 (ubiquinone biosynthesis protein mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 401.4 bits (1030), Expect = 3.100e-108
Identity = 218/324 (67.28%), Postives = 259/324 (79.94%), Query Frame = 0
Query:   43 PTKRAFATTTTA--ADVSNDSXXXXPPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKVPWTGTIVAVMHTALANLAAMAPASPSTCGPFQEKWDVAGKGGKEEGSQSSTDYRVPLEKDPYA 365
            P  RAF   +TA   D S          ++   +TFQDPRQEILAAALPLV  HGWTEE LAAGAASLGFPAVAHGMF RG IELVE+ +AQID+AW+AELEAR++ELA+ PSSRERLE+AI+ RLRLIAP+LAQWPQA+AL LSP +LETTARGLAEVADELCV + +D  +++ NWYAHRATVCSVY+ATELFFLTDYS+DY+DTWAFL RRL+DVEALSHAP NVQEGVLAFQTAASAMASA++SL QPA++G L+KVP TGT+V V+H  LANLAAMAP +PS   PF +      +  K+  +++ST++    E DPYA
Sbjct:   44 PVVRAFKAFSTADHFDRSKTEEESSNAASSASTSTFQDPRQEILAAALPLVPTHGWTEEALAAGAASLGFPAVAHGMFARGGIELVEHVLAQIDSAWLAELEARKEELAAFPSSRERLEKAIQCRLRLIAPHLAQWPQAMALSLSPQHLETTARGLAEVADELCVISGED-SVNVPNWYAHRATVCSVYIATELFFLTDYSDDYRDTWAFLNRRLQDVEALSHAPRNVQEGVLAFQTAASAMASALSSLTQPAVVGVLEKVPLTGTVVTVVHAVLANLAAMAPTTPS---PFDQ------EESKKRETETSTEFGPSTEIDPYA 357          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: XP_008870924.1 (rpsU-divergently transcribed protein [Aphanomyces invadans] >ETW00789.1 rpsU-divergently transcribed protein [Aphanomyces invadans])

HSP 1 Score: 165.6 bits (418), Expect = 2.900e-37
Identity = 99/236 (41.95%), Postives = 139/236 (58.90%), Query Frame = 0
Query:   66 PPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKV 302
            P  A   A   QDP Q IL+ AL  V   GW+ E+L +GA   G+P+VAHGMF RG IELVEY M  +    V +  A +  +  +P + +RL+R IR RL L+APY++ WPQA+ALG  P N  TT + LAE+ D++ V    D   D+ +WY  RA +  VY ATELF L+D+S ++++TW FL+RR+ +  AL   P N Q+          ++ S  A+LA P     +Q+V
Sbjct:   23 PATAAASATQQQDPSQLILSCALNHVKTQGWSIESLGSGARDAGYPSVAHGMFPRGPIELVEYFMDDLQHT-VQDKLAAESTVVDIPVT-DRLKRGIRVRLELLAPYISVWPQAMALGALPQNAPTTMKKLAEMIDDIWVFA-GDRTTDM-SWYTKRAVLTGVYTATELFMLSDHSPNHEETWKFLDRRIEEAIALGDIPNNAQDVAGMVSIGIQSLLSTAAALAGPVTQQVVQQV 254          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: XP_009826152.1 (rpsU-divergently transcribed protein [Aphanomyces astaci] >ETV84460.1 rpsU-divergently transcribed protein [Aphanomyces astaci])

HSP 1 Score: 162.2 bits (409), Expect = 3.200e-36
Identity = 96/225 (42.67%), Postives = 133/225 (59.11%), Query Frame = 0
Query:   77 QDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKV 302
            QDP   IL+ A+  V   GW+ ++L +GA   G+P+VAHGMF RG IELVEY M  +      +L A   E   LP + +RL+R IR+RL L+APY++ WPQA+ALG  P N  TT + LAE+ D++ V    D   D+ +WY  RA +  VY ATELF LTD S +++DTW FL+RR+ +  AL   P N  +          ++ S  A+LA P     +Q+V
Sbjct:   32 QDPSHIILSHAIDHVKTKGWSVDSLGSGARDAGYPSVAHGMFPRGPIELVEYFMDDLQHKVQDKLAA---ETIDLPVT-DRLKRGIRFRLELLAPYISVWPQAMALGALPQNAPTTVKKLAEMVDDIWVYA-GDRSTDV-SWYTKRAVLTGVYTATELFMLTDQSPNHEDTWRFLDRRIEEAIALGDIPNNAHDVAGMLSIGIQSLLSTAAALAGPLTTQVVQQV 250          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: POM59838.1 (RpsU-divergently transcribed protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 158.7 bits (400), Expect = 3.500e-35
Identity = 99/249 (39.76%), Postives = 139/249 (55.82%), Query Frame = 0
Query:   45 KRAFATTTTAADVS-NDSXXXXPPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQP 293
            ++ F T  TAA V  + +        T  +    DP + IL  A+  V  HGWT E LAAGA  LG+P+VAHGMF RGA+ELVEY M          L    D+L ++ +  ERL+  +R RL ++ P +A WPQA+A+G  P N   TA+ LA+++DE+      D+  D  +WY  RA +  +Y +TELF L D S ++QDTWAFL+RR+ +   L   P N+ +          ++ SAV SLA P
Sbjct:   34 RQCFQTAPTAAQVRLHSTQTSGASEETAKSELPVDPEKRILIKAIEHVTVHGWTIEALAAGATDLGYPSVAHGMFARGAVELVEYFMDSCLDKLRETLIVNTDKLQTM-TVAERLKFGVRARLEMLEPVMATWPQAMAIGALPQNAPNTAKRLAQISDEIWYFA-GDKSTDF-SWYTKRAILTGIYASTELFMLNDKSPNFQDTWAFLDRRVDETIQLGELPQNLNDVAGMASIGLQSVFSAVTSLAGP 279          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: XP_008603759.1 (hypothetical protein SDRG_00075 [Saprolegnia diclina VS20] >EQC42336.1 hypothetical protein SDRG_00075 [Saprolegnia diclina VS20])

HSP 1 Score: 158.3 bits (399), Expect = 4.600e-35
Identity = 100/241 (41.49%), Postives = 133/241 (55.19%), Query Frame = 0
Query:   69 ATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRE-----RLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKVPWT 305
            A P A    DP Q IL  AL  V   GWT ETL  GA   GFP++AHGMF RG IELVE+ M      W  ++   QD LA+ P   E     RL+R ++ RL+L++PYL  WPQA+ALG  P N  TT + LA+ +D++      D   DL +WY  RA +  +Y ATELF LTD S +++DTW FL+RR+ +  AL   P N  +          ++ S  A+LA P     + +V  T
Sbjct:   24 AAPAAPVAADPSQTILTNALRHVQASGWTIETLGQGARDAGFPSIAHGMFPRGPIELVEFFMDD----WQRQV---QDALAAEPVDGEFVPTDRLKRGVQIRLQLLSPYLHVWPQAMALGALPQNAPTTMKKLAQASDDIWFFA-GDRSTDL-SWYTKRAVLTGIYTATELFMLTDTSPNHEDTWCFLDRRVEEAIALGEVPQNAGDIAGMVSIGLQSLLSTAAALAGPLSSQVVAQVAHT 255          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: OQR84315.1 (ubiquinone biosynthesis protein COQ9 [Achlya hypogyna])

HSP 1 Score: 158.3 bits (399), Expect = 4.600e-35
Identity = 97/236 (41.10%), Postives = 133/236 (56.36%), Query Frame = 0
Query:   71 PHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQE--GV--LAFQTAASAMASAVASLAQPAMMGALQKVP 303
            P A    DP Q IL  A+  V   GWT E L  GA   GFP++AHGMF RG IELV++ M    A   A L A   +  S   + +RL+R ++ RL+L+APYL  WPQA+ALG  P N  TT + LA+ AD++      D   DL +WY  RA +  +Y ATELF LTD S +Y++TW FL+RR+ +  AL   P N  +  G+  +  Q+  S  A+    L+   +   +Q+VP
Sbjct:   25 PAAPVVVDPSQTILTNAMKHVQTSGWTIEALGQGARDAGFPSIAHGMFPRGPIELVDFFMDDWQAKMQAALAAEPIDATSEYVATDRLKRGVQIRLQLLAPYLHVWPQAMALGALPQNAPTTMKKLAQAADDIWFFA-GDRSTDL-SWYTKRALLTGIYAATELFMLTDASPNYEETWKFLDRRVEEAIALGDLPQNAGDIAGMVSIGLQSLLSTTAALAGPLSSQVVAQVVQQVP 258          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: XP_008901392.1 (rpsU-divergently transcribed protein [Phytophthora parasitica INRA-310] >ETK92609.1 rpsU-divergently transcribed protein [Phytophthora parasitica] >ETL46018.1 rpsU-divergently transcribed protein [Phytophthora parasitica] >ETN13349.1 rpsU-divergently transcribed protein [Phytophthora parasitica INRA-310] >ETO81407.1 rpsU-divergently transcribed protein [Phytophthora parasitica P1976] >ETP22568.1 rpsU-divergently transcribed protein [Phytophthora parasitica CJ01A1])

HSP 1 Score: 157.5 bits (397), Expect = 7.900e-35
Identity = 121/341 (35.48%), Postives = 175/341 (51.32%), Query Frame = 0
Query:    1 MRGRPALSAVVLARRCLASPQHLAAKSQTVLVPHRPGHLNTKPTKRAFATTTTAADVSNDSXXXXPPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKVPWT---------GTIV--AVMHTALANLAAMAPASPSTCG 331
            +R    L+  V ++R +A    ++A  Q+           T P  R  +T  TAA  S +S     P   P      DP Q ILA A+  V  HGWT E LAAGA  LG+P+VAHGMF RGA+ELVEY M    A     L    ++L ++ +  ERL+  +R RL ++ P LA WPQ +A+G  P N  +TA+ LA ++DE+      D+  DL +WY  RA +  +Y +TELF L D S ++QDTWAFL+RR+ +   L   P N+ +          ++ SAV SLA P     +   P +         G++V  +V+    + +   +PAS  + G
Sbjct:   12 IRRSARLATAVTSKRTVAHAASVSAIRQS---------FQTTPRIRLHSTQITAA--SEES-----PKTEPQV----DPEQLILAKAMGHVVAHGWTIEALAAGATDLGYPSVAHGMFSRGAVELVEYFMDSCLAKLRETLIVNTEKLQAM-TVAERLKFGVRARLEMLEPVLATWPQGMAIGALPQNAPSTAKRLAMLSDEIWYFA-GDKSTDL-SWYTKRAILTGIYASTELFMLNDKSPNFQDTWAFLDRRVDETIQLGELPQNLNDVAGMASIGLQSVFSAVTSLAGPLAGQIISNSPLSQVPNPISAVGSVVPPSVVSAVASGMPFNSPASAGSAG 329          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: ETI52729.1 (rpsU-divergently transcribed protein [Phytophthora parasitica P1569] >ETL99172.1 rpsU-divergently transcribed protein [Phytophthora parasitica] >ETM52325.1 rpsU-divergently transcribed protein [Phytophthora parasitica])

HSP 1 Score: 156.8 bits (395), Expect = 1.300e-34
Identity = 123/340 (36.18%), Postives = 175/340 (51.47%), Query Frame = 0
Query:    7 LSAVVLARRCLASPQHLA-AKSQTVLVPHRPG------HLNTKPTKRAFATTTTAADVSNDSXXXXPPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKVPWT------GTIVAVMHTALANLAA--MAPASPSTCGP 332
            L A++ +R  +    HLA A +    V H           +T P  R  +T  TAA  S +S     P   P      DP Q ILA A+  V  HGWT E LAAGA  LG+P+VAHGMF RGA+ELVEY M    A     L    ++L ++ +  ERL+  +R RL ++ P LA WPQ +A+G  P N  +TA+ LA ++DE+      D+  DL +WY  RA +  +Y +TELF L D S ++QDTWAFL+RR+ +   L   P N+ +          ++ SAV SLA P     +   P +        + +V+  ++ +  A  M   SP++ GP
Sbjct:    2 LLAIMASRSLIRRSAHLATAVTSKRTVAHAASVSAIRQSFHTTPRIRLHSTQITAA--SEES-----PKTEPQV----DPEQLILAKAMGHVVAHGWTIEALAAGATDLGYPSVAHGMFSRGAVELVEYFMDSCLAKLRETLIVNTEKLQAM-TVAERLKFGVRARLEMLEPVLATWPQGMAIGALPQNAPSTAKRLAMLSDEIWYFA-GDKSTDL-SWYTKRAILTGIYASTELFMLNDKSPNFQDTWAFLDRRVDETIQLGELPQNLNDVAGMASIGLQSVFSAVTSLAGPLAGQIISNSPLSQVPNPISAVGSVVPPSVVSAVASGMPFNSPASAGP 327          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: ETP50534.1 (rpsU-divergently transcribed protein [Phytophthora parasitica P10297])

HSP 1 Score: 156.8 bits (395), Expect = 1.300e-34
Identity = 114/299 (38.13%), Postives = 160/299 (53.51%), Query Frame = 0
Query:   41 TKPTKRAFATTTTAADVSNDSXXXXPPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKVPWT------GTIVAVMHTALANLAA--MAPASPSTCGP 332
            T P  R  +T  TAA  S +S     P   P      DP Q ILA A+  V  HGWT E LAAGA  LG+P+VAHGMF RGA+ELVEY M    A     L    ++L ++ +  ERL+  +R RL ++ P LA WPQ +A+G  P N  +TA+ LA ++DE+      D+  DL +WY  RA +  +Y +TELF L D S ++QDTWAFL+RR+ +   L   P N+ +          ++ SAV SLA P     +   P +        + +V+  ++ +  A  M   SP++ GP
Sbjct:   43 TTPRIRLHSTQITAA--SEES-----PKTEPQV----DPEQLILAKAMGHVVAHGWTIEALAAGATDLGYPSVAHGMFSRGAVELVEYFMDSCLAKLRETLIVNTEKLQAM-TVAERLKFGVRARLEMLEPVLATWPQGMAIGALPQNAPSTAKRLAMLSDEIWYFA-GDKSTDL-SWYTKRAILTGIYASTELFMLNDKSPNFQDTWAFLDRRVDETIQLGELPQNLNDVAGMASIGLQSVFSAVTSLAGPLAGQIISNSPLSQVPNPISAVGSVVPPSVVSAVASGMPFNSPASAGP 327          
BLAST of NO05G03860 vs. NCBI_GenBank
Match: KUF78593.1 (Ubiquinone biosynthesis protein COQ9 [Phytophthora nicotianae])

HSP 1 Score: 156.4 bits (394), Expect = 1.800e-34
Identity = 121/341 (35.48%), Postives = 174/341 (51.03%), Query Frame = 0
Query:    1 MRGRPALSAVVLARRCLASPQHLAAKSQTVLVPHRPGHLNTKPTKRAFATTTTAADVSNDSXXXXPPPATPHAATFQDPRQEILAAALPLVAKHGWTEETLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELASLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAFLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQKVPWT---------GTIV--AVMHTALANLAAMAPASPSTCG 331
            +R    L+  V ++R +A    ++A  Q+           T P  R  +T  TAA  S +S     P   P      DP Q ILA A+  V  HGWT E LAAGA  LG+P+VAHGMF RGA+ELVEY M    A     L    ++L +  +  ERL+  +R RL ++ P LA WPQ +A+G  P N  +TA+ LA ++DE+      D+  DL +WY  RA +  +Y +TELF L D S ++QDTWAFL+RR+ +   L   P N+ +          ++ SAV SLA P     +   P +         G++V  +V+    + +   +PAS  + G
Sbjct:    7 IRRSARLATAVTSKRTVAHAASVSAIRQS---------FQTTPRIRLHSTQITAA--SEES-----PKTEPQV----DPEQLILAKAMGHVVAHGWTIEALAAGATDLGYPSVAHGMFSRGAVELVEYFMDSCLAKLRETLIVNTEKLQA-XTVAERLKFGVRARLEMLEPVLATWPQGMAIGALPQNAPSTAKRLAMLSDEIWYFA-GDKSTDL-SWYTKRAILTGIYASTELFMLNDKSPNFQDTWAFLDRRVDETIQLGELPQNLNDVAGMASIGLQSVFSAVTSLAGPLAGQIISNSPLSQVPNPISAVGSVVPPSVVSAVASGMPFNSPASAGSAG 324          
The following BLAST results are available for this feature:
BLAST of NO05G03860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27936.13.100e-10867.28ubiquinone biosynthesis protein mitochondrial [Nan... [more]
XP_008870924.12.900e-3741.95rpsU-divergently transcribed protein [Aphanomyces ... [more]
XP_009826152.13.200e-3642.67rpsU-divergently transcribed protein [Aphanomyces ... [more]
POM59838.13.500e-3539.76RpsU-divergently transcribed protein [Phytophthora... [more]
XP_008603759.14.600e-3541.49hypothetical protein SDRG_00075 [Saprolegnia dicli... [more]
OQR84315.14.600e-3541.10ubiquinone biosynthesis protein COQ9 [Achlya hypog... [more]
XP_008901392.17.900e-3535.48rpsU-divergently transcribed protein [Phytophthora... [more]
ETI52729.11.300e-3436.18rpsU-divergently transcribed protein [Phytophthora... [more]
ETP50534.11.300e-3438.13rpsU-divergently transcribed protein [Phytophthora... [more]
KUF78593.11.800e-3435.48Ubiquinone biosynthesis protein COQ9 [Phytophthora... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03860.1NO05G03860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100008g31gene2547Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03860.1NO05G03860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03860 ID=NO05G03860|Name=NO05G03860|organism=Nannochloropsis oceanica|type=gene|length=1122bp
ATGCGTGGACGTCCGGCCCTCTCTGCCGTTGTTCTAGCCCGCCGGTGCCT
GGCCTCTCCCCAGCATCTGGCCGCAAAGAGTCAGACGGTGCTAGTGCCGC
ATCGTCCAGGCCACCTCAACACCAAACCCACAAAGAGAGCTTTTGCCACC
ACCACCACCGCTGCCGATGTGTCCAACGACAGTAGCACAGATGCGCCTCC
GCCTGCCACGCCACATGCCGCGACTTTCCAAGACCCGCGACAAGAGATCC
TTGCGGCGGCATTGCCCCTAGTCGCCAAGCATGGTTGGACCGAAGAGACC
TTGGCAGCTGGTGCTGCCTCACTCGGGTTTCCTGCCGTAGCGCACGGCAT
GTTTGGACGGGGTGCCATTGAATTGGTGGAGTACGCTATGGCACAAATTG
ATGCTGCATGGGTCGCCGAGCTTGAGGCGCGTCAAGACGAATTGGCTTCT
TTGCCCTCGTCACGTGAGAGGTTGGAGCGAGCGATTCGATGGCGCCTGCG
ATTAATTGCCCCCTATTTAGCACAATGGCCACAAGCCTTGGCGCTAGGGT
TGTCGCCGCACAATTTGGAGACAACCGCACGGGGATTGGCGGAAGTGGCG
GACGAGTTGTGTGTGACCACGGAGAAGGATGAGGGGATGGACTTGACAAA
TTGGTACGCGCATCGCGCCACCGTCTGCTCGGTTTACGTAGCCACGGAAT
TATTTTTCCTGACGGATTACTCAGAGGATTATCAGGACACCTGGGCATTT
TTGGAAAGGCGACTTCGGGATGTTGAGGCTTTGTCGCATGCCCCTACCAA
TGTGCAGGAGGGGGTTCTAGCCTTCCAGACCGCCGCCTCCGCCATGGCCT
CAGCGGTTGCTTCTTTGGCACAGCCTGCCATGATGGGGGCATTGCAAAAA
GTACCATGGACAGGGACAATTGTCGCAGTGATGCATACTGCCTTGGCTAA
TCTGGCCGCAATGGCCCCGGCGAGTCCGTCAACTTGTGGGCCCTTCCAAG
AGAAGTGGGATGTAGCGGGGAAAGGAGGGAAGGAAGAGGGTAGCCAAAGT
TCGACCGATTATAGAGTGCCCTTGGAGAAAGATCCATACGCGGAGGAAGA
AGCCCAGAGGCTGAAGAAGTGA
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protein sequence of NO05G03860.1

>NO05G03860.1-protein ID=NO05G03860.1-protein|Name=NO05G03860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MRGRPALSAVVLARRCLASPQHLAAKSQTVLVPHRPGHLNTKPTKRAFAT
TTTAADVSNDSSTDAPPPATPHAATFQDPRQEILAAALPLVAKHGWTEET
LAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELAS
LPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEVA
DELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWAF
LERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQK
VPWTGTIVAVMHTALANLAAMAPASPSTCGPFQEKWDVAGKGGKEEGSQS
STDYRVPLEKDPYAEEEAQRLKK*
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