NO05G03800, NO05G03800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03800 vs. NCBI_GenBank
Match: XP_024576441.1 (eukaryotic translation initiation factor x-chromosomal [Plasmopara halstedii] >CEG40072.1 eukaryotic translation initiation factor x-chromosomal [Plasmopara halstedii]) HSP 1 Score: 179.1 bits (453), Expect = 1.700e-41 Identity = 83/126 (65.87%), Postives = 97/126 (76.98%), Query Frame = 0 Query: 109 MPKNXXXXXXXXXXXXXXXXETKRDLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEG 235 MPKN E KRDL FKE+GQEY QV+RMLGNGR E YCFDG RL HIRGKMRKKVWV AGDI+L+ +R+YQ+ KVD+IHKYNADEAR+LKA+GELP+ A+INETA+D+ MEG Sbjct: 1 MPKNKGKGGKNRRRGKNDNEENKRDLEFKEDGQEYAQVVRMLGNGRLEAYCFDGVTRLGHIRGKMRKKVWVGAGDIILVSLREYQDGKVDVIHKYNADEARSLKAYGELPDNARINETAVDMAMEG 126
BLAST of NO05G03800 vs. NCBI_GenBank
Match: GAX16111.1 (translation initiation factor 1A [Fistulifera solaris]) HSP 1 Score: 175.6 bits (444), Expect = 1.900e-40 Identity = 79/110 (71.82%), Postives = 98/110 (89.09%), Query Frame = 0 Query: 140 GQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 GQEY QV++MLGNGRCE +CFDG RL HIRGKMRKKVW++AGDIVL+ RD+Q++KVDIIHKY+ADEARNLK +GELPETA+INETA+D+ M G +D +D+IG+DFD+I Sbjct: 58 GQEYAQVVKMLGNGRCECFCFDGVTRLGHIRGKMRKKVWITAGDIVLVAKRDFQDEKVDIIHKYSADEARNLKQYGELPETARINETAVDMAMAGDAD-DDDIGIDFDDI 166
BLAST of NO05G03800 vs. NCBI_GenBank
Match: XP_008875339.1 (eukaryotic translation initiation factor 1A, Y-chromosomal [Aphanomyces invadans] >XP_009830708.1 eukaryotic translation initiation factor 1A, Y-chromosomal [Aphanomyces astaci] >ETV79772.1 eukaryotic translation initiation factor 1A, Y-chromosomal [Aphanomyces astaci] >ETV96028.1 eukaryotic translation initiation factor 1A, Y-chromosomal [Aphanomyces invadans]) HSP 1 Score: 175.3 bits (443), Expect = 2.400e-40 Identity = 83/121 (68.60%), Postives = 101/121 (83.47%), Query Frame = 0 Query: 129 ETKRDLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 E KR+L FKE+GQEY QVLRMLGNGR E YC+DG RL HIRGKMRKKVWV GDIVL+ +R+YQ+ KVDIIHKYNADEAR+LKA+GELP+ A+INET++D M+G D +D+ G +FD+I Sbjct: 24 ENKRELEFKEDGQEYAQVLRMLGNGRLEAYCYDGVTRLGHIRGKMRKKVWVGVGDIVLVSLREYQDGKVDIIHKYNADEARSLKAYGELPDNARINETSVD--MDGAGD-DDDCGFEFDDI 141
BLAST of NO05G03800 vs. NCBI_GenBank
Match: GAX98441.1 (eukaryotic translation initiation factor 1A, putative [Pythium insidiosum]) HSP 1 Score: 174.5 bits (441), Expect = 4.200e-40 Identity = 98/141 (69.50%), Postives = 116/141 (82.27%), Query Frame = 0 Query: 109 MPKNXXXXXXXXXXXXXXXXETKRDLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 MPKN XXXXXXXXXXXXXX L FKEEGQEY QV+RMLGNGR E YCFDG RL HIRGKMRKKVWV AGDI+L+ +R+YQ+ KVD+IHKYNADEAR+LKA+GELP+ A+INET++++ ME +D+IG DFD+I Sbjct: 1 MPKNKGXXXXXXXXXXXXXXXXXXXLEFKEEGQEYAQVVRMLGNGRLEAYCFDGVTRLGHIRGKMRKKVWVGAGDIILVSLREYQDGKVDVIHKYNADEARSLKAYGELPDNARINETSVEMAME---PDDDDIGFDFDDI 138
BLAST of NO05G03800 vs. NCBI_GenBank
Match: OQR94965.1 (eukaryotic translation initiation factor 1A [Thraustotheca clavata]) HSP 1 Score: 173.3 bits (438), Expect = 9.300e-40 Identity = 82/117 (70.09%), Postives = 100/117 (85.47%), Query Frame = 0 Query: 133 DLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 +L FKE+GQEY QVLRMLGNGR E YC+DG RL HIRGKMRKKVWV AGDIVL+ +R+YQ+ KVD+IHKYNADEAR+LKA+GELP+ A+INET +D MEGG+D +D+ G +FD+I Sbjct: 27 ELEFKEDGQEYAQVLRMLGNGRLEAYCYDGVTRLGHIRGKMRKKVWVGAGDIVLVSLREYQDGKVDVIHKYNADEARSLKAYGELPDNARINETNVD--MEGGND-DDDCGFEFDDI 140
BLAST of NO05G03800 vs. NCBI_GenBank
Match: OQR82338.1 (eukaryotic translation initiation factor 1A [Achlya hypogyna]) HSP 1 Score: 172.9 bits (437), Expect = 1.200e-39 Identity = 82/117 (70.09%), Postives = 99/117 (84.62%), Query Frame = 0 Query: 133 DLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 +L FKE+GQEY QVLRMLGNGR E YC+DG RL HIRGKMRKKVWV AGDIVL+ +R+YQ+ KVD+IHKYNADEAR+LKA+GELP+ A+INET +D MEGG D +D+ G +FD+I Sbjct: 27 ELEFKEDGQEYAQVLRMLGNGRLEAYCYDGVTRLGHIRGKMRKKVWVGAGDIVLVSLREYQDGKVDVIHKYNADEARSLKAYGELPDNARINETNVD--MEGGGD-DDDCGFEFDDI 140
BLAST of NO05G03800 vs. NCBI_GenBank
Match: EJK58953.1 (hypothetical protein THAOC_20881 [Thalassiosira oceanica]) HSP 1 Score: 172.2 bits (435), Expect = 2.100e-39 Identity = 77/111 (69.37%), Postives = 98/111 (88.29%), Query Frame = 0 Query: 139 EGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 E QEY QV+RMLGNGRCE +C+DG RL HIRGKMRKK+W++AGDIVL+G RD+Q++KVDI+HKY+ADEARNLK +GELPETA+INETA+D M G ++ +D+IG+DFD+I Sbjct: 10 EDQEYAQVVRMLGNGRCECFCYDGVTRLGHIRGKMRKKIWITAGDIVLVGKRDFQDEKVDILHKYSADEARNLKQYGELPETARINETAVDQAM-GFANDDDDIGIDFDDI 119
BLAST of NO05G03800 vs. NCBI_GenBank
Match: XP_008608367.1 (translation initiation factor 1A [Saprolegnia diclina VS20] >XP_012206309.1 hypothetical protein SPRG_11868 [Saprolegnia parasitica CBS 223.65] >EQC38040.1 translation initiation factor 1A [Saprolegnia diclina VS20] >KDO23021.1 hypothetical protein SPRG_11868 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 171.8 bits (434), Expect = 2.700e-39 Identity = 81/114 (71.05%), Postives = 97/114 (85.09%), Query Frame = 0 Query: 136 FKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDEI 250 FKE+GQEY QVLRMLGNGR E YC+DG RL HIRGKMRKKVWV AGDIVL+ +R+YQ+ KVD+IHKYNADEAR+LKA+GELP+ A+INET +D MEGG D +D+ G +FD+I Sbjct: 31 FKEDGQEYAQVLRMLGNGRLEAYCYDGVTRLGHIRGKMRKKVWVGAGDIVLVSLREYQDGKVDVIHKYNADEARSLKAYGELPDNARINETNVD--MEGGGD-DDDCGFEFDDI 141
BLAST of NO05G03800 vs. NCBI_GenBank
Match: KKY15584.1 (putative eukaryotic translation initiation factor 1a [Diplodia seriata] >OMP86074.1 Eukaryotic translation initiation factor 1A [Diplodia seriata]) HSP 1 Score: 168.3 bits (425), Expect = 3.000e-38 Identity = 83/140 (59.29%), Postives = 100/140 (71.43%), Query Frame = 0 Query: 109 MPKNXXXXXXXXXXXXXXXXETKRDLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFDE 249 MPKN KR+L+FKEEGQEY QV++MLGNGR E CFDG+ RLAHIRGKMRKKVW++ GDI+LL +RDYQ++K D+I KYN+DEAR+LKA+GELPETAKINET GG E IG +FD+ Sbjct: 1 MPKNKGKGGKNRRRGKNENDNLKRELVFKEEGQEYAQVVKMLGNGRLEAQCFDGEKRLAHIRGKMRKKVWINQGDIILLSLRDYQDEKGDVILKYNSDEARSLKAYGELPETAKINET----DTYGGEGDEGGIGFEFDD 136
BLAST of NO05G03800 vs. NCBI_GenBank
Match: XP_021885978.1 (hypothetical protein BCR41DRAFT_344985 [Lobosporangium transversale] >OAQ32094.1 nucleic acid-binding protein [Mortierella elongata AG-77] >ORZ28293.1 hypothetical protein BCR41DRAFT_344985 [Lobosporangium transversale]) HSP 1 Score: 168.3 bits (425), Expect = 3.000e-38 Identity = 97/139 (69.78%), Postives = 116/139 (83.45%), Query Frame = 0 Query: 109 MPKNXXXXXXXXXXXXXXXXETKRDLLFKEEGQEYGQVLRMLGNGRCEVYCFDGKNRLAHIRGKMRKKVWVSAGDIVLLGMRDYQEDKVDIIHKYNADEARNLKAFGELPETAKINETAIDLTMEGGSDSEDEIGVDFD 248 MPKN XXXXXXXXXXXXXX KR+L+FKE+GQEY QVL+MLGNGR E CFDG+ RLAHIRGKMRKKVW++ GDI+L+ +RD+Q+DK D+I KYN +EARNLKA+GELPE+AKINET T +G SEDE+ V+FD Sbjct: 1 MPKNKGXXXXXXXXXXXXXXXXKRELVFKEDGQEYAQVLKMLGNGRVEAQCFDGEKRLAHIRGKMRKKVWINQGDIILISLRDFQDDKADVILKYNTEEARNLKAYGELPESAKINETD---TFQG---SEDELDVEFD 133 The following BLAST results are available for this feature:
BLAST of NO05G03800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03800 ID=NO05G03800|Name=NO05G03800|organism=Nannochloropsis oceanica|type=gene|length=1867bpback to top protein sequence of NO05G03800.1 >NO05G03800.1-protein ID=NO05G03800.1-protein|Name=NO05G03800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=250bpback to top Synonyms
Publications
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