NO05G03400, NO05G03400 (gene) Nannochloropsis oceanica

Overview
NameNO05G03400
Unique NameNO05G03400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1355
Alignment locationchr5:897738..899092 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:897738..899092 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G03400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03400.1NO05G03400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03400.1NO05G03400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03400 ID=NO05G03400|Name=NO05G03400|organism=Nannochloropsis oceanica|type=gene|length=1355bp
ATGATGGTAGATTGCCAGgtgcagtagaataatttcccctcctcccaaga
accgaggcaagcgtgcgtggcacatggcttttttgtttactgccgccgca
cccacctattctcccccccctccgttccctccttcctacccacccatgcg
ccacacaccacacacccacagCTGATTCCCCCGCGCGTCAGCCTGGAGGT
GAACGACAGTATCGTGGCCACACCAAAGGGACAGGAGGGCGCCGAGGCAG
GCgtgcgtggcacgcggctgttttgtttactgccgccgcacccacctatt
ctccccccccctccgttccctccttcctacccacctattcaccgcgactg
caacttacattttgccattgtgccaaggacaacaccacaacctccataag
agccgtcacaattcctctctatttcatcccctcccccccccccccctcct
caaaccacagACAAAGGTACACCTCGATTGTGGGCAGCGTCTCAACCCAA
TTGCGAGAAGGGTAGAAGGAGAAGGAGGTGAAGGAGGAGAAGGAGGAGAA
GGAGGAGAAGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGG
TGGAGGAGGAGGAGGAGAAGGGGGAGGAGGAGGAGGTGGAGGAGGAGGAG
GTGGAGGAGGAGGAGGAGGAGAAGGGGGAGGAGGCGGAGCAGGAGAAGAA
GGGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGGAGAGGAAGAGGT
AAAAGAGGAAGAAGAGGAAGAAGAATATGAGGAAGAGGAAGAAGAGGAAG
AGGAAGAGGAAGAAGAAGAGGAAGGAGAAGAAGAAAAAGAAGAGGAAGAA
GAAGAAGAAGAGGAGGCGGAGGTGGAGGAGGACGAGGACGAGGCAGAGGA
GGTCACGGGCGAGCCATCTGAGGACTGTACTGGTGTGACACCTGTGAACA
GTTCGTGTCCCGTGACGGCAATAGGGCACGTAGCATTCTGTGGGTGTACA
GGAGTATGGTCCGGGGAGAAGCTCGTCCCCATGATCTTCGGTTTGGTCAA
CCGCAGCAACATATAGGGACACTCTACCTGTTGCCTCCTCGCTGACCTCC
TCTTTTATCCTCCTCCCCCTTCTCCTCCTGGCCCTGTGTGGGCCGTCCGG
GGACTTTGCCAGGTCAAAAAACCTGTCAAAGTCGCTAGAAAGACTCGGAC
GAGGAATAAGGGATGACAACAATTTATTGTTGGAAGGCTCCCCCTCGTAT
GCAAGTCCTCGAAGACGTCAGGTTGCATGCGATAGTTCTAGAGAGATGTA
GGAACGCAACTCAAAAAGAACTAACCTCATCCCAAGCGAAACGAAAAAGT
AATGC
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protein sequence of NO05G03400.1

>NO05G03400.1-protein ID=NO05G03400.1-protein|Name=NO05G03400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MMVDCQLIPPRVSLEVNDSIVATPKGQEGAEAGTKVHLDCGQRLNPIARR
VEGEGGEGGEGGEGGEGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGG
GGGEGGGGGAGEEGEEEEDEQEEEGGEEEVKEEEEEEEYEEEEEEEEEEE
EEEEGEEEKEEEEEEEEEAEVEEDEDEAEEVTGEPSEDCTGVTPVNSSCP
VTAIGHVAFCGCTGVWSGEKLVPMIFGLVNRSNI*
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Synonyms
Publications