NO05G03240, NO05G03240 (gene) Nannochloropsis oceanica

Overview
NameNO05G03240
Unique NameNO05G03240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2650
Alignment locationchr5:842106..844755 +

Link to JBrowse

Properties
Property NameValue
DescriptionVacuolar iron family transporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:842106..844755 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008217Ccc1_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO05G03240 vs. NCBI_GenBank
Match: GBG25424.1 (Vacuolar iron transporter 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 245.4 bits (625), Expect = 2.300e-61
Identity = 127/265 (47.92%), Postives = 180/265 (67.92%), Query Frame = 0
Query:   29 VQAAQHAYRLNDIEASRLIHEQKFEAKNH--DETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSL 292
            ++ A+ AY  N++ AS   H      K+H  +E H  +GD +KS+++GGLDG+LT FAI++GAAGG L    V++LG SNI ADAFSMG+G+ +S+ A++E V++E++RE WE  NF +GEI EM+D+Y +RG+  D A+ VV+ M+KY  FF+++MM EEL L+VP PD++  K+GVV F +F  FG MPLLGY ++PL  P      LF  A IVT L LF++G+ KS FS   W +SG+E L+LG   A  +Y I  +V  L
Sbjct:   18 MEKARQAYYENNVSASIEAH------KSHAAEEGHRTLGDSIKSVVYGGLDGVLTCFAIISGAAGGNLGPSTVLILGVSNIVADAFSMGVGDCVSTIAYHEHVMQERKREVWEFDNFEDGEITEMVDLYEQRGLPRDKAQVVVKTMAKYKEFFIDIMMCEELQLKVPGPDENPYKDGVVTFFSFLIFGTMPLLGYLIVPLVVPDVSSSVLFITAVIVTMLVLFILGSFKSAFSASSWWYSGLEFLLLGSAVASTSYGIAMIVEEL 276          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: KOO30199.1 (vacuolar iron family transporter [Chrysochromulina sp. CCMP291])

HSP 1 Score: 238.0 bits (606), Expect = 3.700e-59
Identity = 120/237 (50.63%), Postives = 169/237 (71.31%), Query Frame = 0
Query:   59 ETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDI--VKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVG 294
            E H+  G  +K++IFGGLDGILTSFAI+AGA G  L    ++ LG SN+ ADA SMG GE+LSS+++N +VLKE+ERE WEL+N  EGEI EM+ ++V RGM   DAE V+ +M+KY+ FFV++MM EEL L VP  +D +  +K+G+ MFLAFA FG +PL  Y L  +  P     +LF+VAC+ TA++LF +GA K++F  + +L++G+E ++LGG CA ++Y +G  VS   G
Sbjct:    8 EEHEESGGRLKAIIFGGLDGILTSFAIIAGAHGANLGPVPMLALGISNVLADALSMGAGEFLSSRSYNSYVLKEREREMWELKNHPEGEIAEMVQLFVARGMSRVDAEVVIERMAKYEEFFVDIMMKEELSLPVPSEEDTLESLKDGIAMFLAFALFGMLPLACYILAGMLAPSLDVTSLFSVACVATAISLFALGAFKARFHDKRYLYAGVETVLLGGACAAVSYFVGRAVSQFAG 244          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: XP_001742963.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ91677.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 236.1 bits (601), Expect = 1.400e-58
Identity = 123/266 (46.24%), Postives = 176/266 (66.17%), Query Frame = 0
Query:   32 AQHAYRLNDIEASRLIHEQKFEAKNHDETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFG----PKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVG 294
            AQ A+  ND   SRL+H+     + H    +  G YVK+ +FGGLDGI+T+FA+VA + G  L   V++++G +N+ AD  +MGMGEYLSS +  ++   E++RE WEL+N+ EGEI EM+++Y+E+G+E +DA  ++  MSKY +FFV+ M+V+ELG+  PD D+   K GVVMFLAF  FG +PLL Y ++     +FG      ALF +AC  T L +FV+GA+KSKFS + W  SG+ +LV GG  A  AY +G L+   VG
Sbjct: 1406 AQRAFNENDPLLSRLVHDMTSATEQH---LNEAGQYVKAAVFGGLDGIITTFAVVASSNGARLSANVIVIMGVANLLADGLAMGMGEYLSSLSELQYARSERQREEWELENYEEGEISEMVELYMEKGIEEEDARQILHIMSKYKDFFVDHMLVQELGIMPPDEDESPFKNGVVMFLAFISFGLVPLLSYLMLQTV--NFGSMDKDTALFAIACGFTGLAMFVLGAIKSKFSQQSWFMSGLTVLVNGGAAAGAAYLVGWLLEKYVG 1666          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: XP_001743284.1 (hypothetical protein, partial [Monosiga brevicollis MX1] >EDQ91998.1 predicted protein, partial [Monosiga brevicollis MX1])

HSP 1 Score: 228.4 bits (581), Expect = 2.900e-56
Identity = 119/270 (44.07%), Postives = 175/270 (64.81%), Query Frame = 0
Query:   32 AQHAYRLNDIEASRLIHEQKFEAKNHDETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPK-----ALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVGVGE 297
            AQ A+R  D + SRL HE     +N    H   G Y+K+ +FGGLDGI+T+FA+VA   G  L   VV+++GF+N+ AD  SMG+GEYLS  +  +F   E++RE WE +N+  GE++EM+++Y+E+G+   DA  ++  M KY +FFV+ M+V+ELG+  PD  +   K G+VMF +F  FG +PLL Y  + L    FG +     ALF +AC +TA+ LFV+GA+KS+FST+ W +SG+ +LV G + A  A+ IG+L+  LV   E
Sbjct:    1 AQRAFREGDAQLSRLAHEMALAPEN----HKGGGQYIKAAVFGGLDGIITTFAVVASVTGANLSAGVVIIMGFANLLADGLSMGVGEYLSGVSELQFAQAERQREEWETENYLAGEVQEMVELYMEKGVTESDARQILDVMVKYKDFFVDHMLVQELGIMPPDESESPAKNGLVMFCSFVVFGLVPLLSY--LALSTVDFGSESENDNALFGIACGLTAMALFVLGAIKSRFSTQTWYYSGLMVLVNGSIAAGAAFLIGYLLEKLVDTDE 264          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: XP_007514497.1 (hypothetical protein Bathy02g05280 [Bathycoccus prasinos] >CCO14737.1 hypothetical protein Bathy02g05280 [Bathycoccus prasinos])

HSP 1 Score: 223.8 bits (569), Expect = 7.200e-55
Identity = 128/292 (43.84%), Postives = 183/292 (62.67%), Query Frame = 0
Query:   29 VQAAQHAYRLNDIEASRLIHEQKFEAK-------------------------NHDETH-DAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVGV 295
            + AA+ A+  ND+ ASR  HE K  A                          + +E H  A G YVKS++FGGLDGI+T+FA+VA + GG L  E+V+++GF+N+FAD  SMG G++LSSKA +E+   EK+RE WE  NF EGE +EM++IY++RGM+ +DA  ++  MSKY++ FV+VMMVEELGL  P+ +   +  G+V F+AF+ FG +PL+ Y LI          ALF  AC +TA TLF +GA K+KF+ +  + SG  ML+ GG+ A+ AY +   +S  +GV
Sbjct:    7 LSAAKDAFNENDVAASRAAHESKANASTVTPRARNSTPGNTTNNTNDGEIKYDAEEAHAGAGGKYVKSLVFGGLDGIITTFAVVAASKGGSLSTEIVLLMGFANLFADGLSMGFGDFLSSKAEHEYATTEKKREKWEFDNFPEGEKREMVEIYMQRGMKEEDATIIIETMSKYEDIFVDVMMVEELGLMPPEEESSFM-NGLVTFVAFSLFGFVPLMPY-LIGRLAKSGSEDALFVSACALTAFTLFSLGAAKAKFTNQAQVKSGFFMLMNGGLAAICAYLVSWGISEGLGV 296          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: XP_004998958.1 (vacuolar iron family transporter [Salpingoeca rosetta] >EGD72389.1 vacuolar iron family transporter [Salpingoeca rosetta])

HSP 1 Score: 222.6 bits (566), Expect = 1.600e-54
Identity = 117/266 (43.98%), Postives = 173/266 (65.04%), Query Frame = 0
Query:   32 AQHAYRLNDIEASRLIHEQKFEAKNHDETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGY-ALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVGVGE 297
            A+ A+  +D E SRL HE     + H       G YVK+ +FGG+DGI+T+FA+VA   G  L   VV+++GF+N+ AD  SMGMGE++S+ + +++ L E+ RE WE  +  EGEIKEM+D+Y+E+G   ++A  ++  M+K+  FF++ MMVEELGL  PD  +   K G+VMFL+F  FG +PLL Y AL  + F      ALF +AC +TA+ LF++GAVKS+FST+ W  SG  +++ G V A  AY +G  + +LV + +
Sbjct:  113 ARKAFEAHDPELSRLAHELGAAPERH---QTEAGQYVKAAVFGGMDGIVTTFAVVASVNGADLATGVVIIMGFANLIADGISMGMGEFMSALSESQYTLSERVREEWEFDHNPEGEIKEMVDLYMEKGFSEEEATQIMTIMAKHREFFIDHMMVEELGLMPPDEGESPAKNGLVMFLSFVAFGLVPLLSYLALSTVDFGSNKSDALFGIACAMTAVALFILGAVKSRFSTQSWYMSGFSVVINGAVSAGAAYLVGLGLENLVSLND 375          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: XP_002499518.1 (vacuolar iron family transporter [Micromonas commoda] >ACO60776.1 vacuolar iron family transporter [Micromonas commoda])

HSP 1 Score: 222.2 bits (565), Expect = 2.100e-54
Identity = 116/243 (47.74%), Postives = 165/243 (67.90%), Query Frame = 0
Query:   53 EAKNHDETHDA--VGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVG 294
            EAK H + H A   G YVKS++FGGLDGI+T+FA+VA + GG L  +V++++GF+N+ AD  SMG G+YLSS+A  ++   E  RE WEL+N+ EGE +EM+++Y++RGM  +DA  V+  M+KY NFF++VMMVEELGL  PD DD   K GVV F +F  FG +PLL Y L             F VACI+T +T+F++GA K+KF+ +  L S + ML+ GG+ A+ AY +   ++S +G
Sbjct:   35 EAKIHGDEHHAGDAGKYVKSLVFGGLDGIITTFAVVAASVGGSLSSDVILLMGFANLIADGLSMGFGDYLSSQAEVDYTKAEHRREKWELENYPEGEKREMVELYMKRGMTEEDAVSVIDVMAKYKNFFLDVMMVEELGLMPPDEDDSPWKNGVVTFASFVFFGFIPLLSYVLSSA--TGASDSVNFVVACILTGVTMFLLGAAKAKFTNQSMLRSALLMLLNGGMAAVAAYLVSWGIASAMG 275          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: XP_003080166.1 (Domain of unknown function DUF125, transmembrane [Ostreococcus tauri] >CAL54333.1 Domain of unknown function DUF125, transmembrane [Ostreococcus tauri])

HSP 1 Score: 218.8 bits (556), Expect = 2.300e-53
Identity = 119/266 (44.74%), Postives = 170/266 (63.91%), Query Frame = 0
Query:   29 VQAAQHAYRLNDIEASRLIHEQKFEAKNHDETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVGV 295
            + AA+ A+   D +ASR  H+   EA +  E     G YVKS++FGGLDG +T+FA+VA + GGGL   VV+++GF+N+ AD  SMG G+YLSSKA  E+   EK+RE WEL+N+ EGE +EMI++Y+ RGM  +DA  V+  ++KY NFF+++MMVEELGL  PD  D   K G+V F AF  FG +PL+ Y +           A+F  AC +TA T+  +GA K+KF+ +    S + ML+ G + AL AY +   ++  +GV
Sbjct:    6 IAAAKDAFENADADASRAAHDANGEAGHAXE----AGRYVKSLVFGGLDGTITTFAVVAASKGGGLDANVVLLMGFANLVADGLSMGFGDYLSSKAELEYARTEKKREKWELENYPEGEKREMIELYMARGMTEEDATSVINTLAKYKNFFLDLMMVEELGLMPPDETDSPAKNGLVTFCAFGLFGFIPLIPY-VFGRAIGGASANAMFGSACALTAFTMAALGAAKAKFTNQQVGMSALYMLINGSLAALSAYLVSFALAKALGV 266          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: WP_069656164.1 (hypothetical protein [Vulcanibacillus modesticaldus] >OEF99944.1 hypothetical protein BHF71_07035 [Vulcanibacillus modesticaldus])

HSP 1 Score: 218.0 bits (554), Expect = 3.900e-53
Identity = 117/261 (44.83%), Postives = 179/261 (68.58%), Query Frame = 0
Query:   32 AQHAYRLNDIEASRLIHEQKFEAKNHDETH-DAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSL 292
            A+ AY+  D+EAS+  H+   +A    E H    G ++KS+I+GGLDGI+T+FA+VAG AG  L   VV++LGF+N+ AD  SM +G+YLSSKA NE+   E+ERE WE+++F EGE +EMI++YV +G+  +DA  +   +SK    +V++MMVEELG  + + ++  VK  +V FL+F  FG +PL+ Y +I    P     A F +A ++T +TLF++GA+K KF+ + WL SG+EML++GG+ A  AY IG+++S++
Sbjct:    9 AKKAYKNKDVEASKKAHQALTDA---PEIHKHEQGQFIKSLIYGGLDGIITTFAVVAGVAGASLSFGVVLILGFANLIADGLSMAIGDYLSSKAENEYKQAEREREIWEIEHFPEGEKQEMIELYVSKGLSKEDATAITNIISKNKEAWVDIMMVEELG--IIEDNESPVKNAIVTFLSFVIFGFIPLITY-VISTFLPGLKDSA-FIIASVLTGITLFILGALKVKFTAKNWLSSGIEMLIIGGIAAFAAYGIGYVLSAV 262          
BLAST of NO05G03240 vs. NCBI_GenBank
Match: WP_068724060.1 (hypothetical protein [Tepidibacillus decaturensis] >KXG43489.1 hypothetical protein U473_05265 [Tepidibacillus decaturensis])

HSP 1 Score: 216.5 bits (550), Expect = 1.100e-52
Identity = 119/261 (45.59%), Postives = 178/261 (68.20%), Query Frame = 0
Query:   32 AQHAYRLNDIEASRLIHEQKFEAKNHDETHD-AVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKEMIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIVKEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFVMGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSL 292
            A+ AY+ N+ EAS+++H+Q+   K+  E H+   G Y+KS I+GGLDGI+T+FA+VAG AG  L   +V+++GF+N+ AD  SM +G+YLS+KA NEF   E+ERE WE++NF EGE +E+I++YV +GM+  DA+ V   +SK    +V++MMVEELG  + + ++  VK  +V F++F+ FG +PL+ Y +    F        F +A I+T  TLFV+GA+K KF  + W  SG+EML++GG+ A  AY IG L+S L
Sbjct:    9 AREAYKSNNKEASKIVHQQR---KHAPEGHNQEQGQYIKSFIYGGLDGIITTFAVVAGVAGAQLSSGIVLIMGFANLIADGLSMAIGDYLSTKAENEFKQSERERELWEVENFPEGEKQELIELYVAKGMDESDAKVVTEIISKNKEAWVDIMMVEELG--ILEENESPVKNAIVTFISFSVFGFIPLVIYVVAG--FTPGIQNFTFLIAIILTGFTLFVLGALKVKFVDKHWFTSGLEMLIVGGIAAASAYGIGILLSGL 262          
The following BLAST results are available for this feature:
BLAST of NO05G03240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GBG25424.12.300e-6147.92Vacuolar iron transporter 1 [Aurantiochytrium sp. ... [more]
KOO30199.13.700e-5950.63vacuolar iron family transporter [Chrysochromulina... [more]
XP_001742963.11.400e-5846.24hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_001743284.12.900e-5644.07hypothetical protein, partial [Monosiga brevicolli... [more]
XP_007514497.17.200e-5543.84hypothetical protein Bathy02g05280 [Bathycoccus pr... [more]
XP_004998958.11.600e-5443.98vacuolar iron family transporter [Salpingoeca rose... [more]
XP_002499518.12.100e-5447.74vacuolar iron family transporter [Micromonas commo... [more]
XP_003080166.12.300e-5344.74Domain of unknown function DUF125, transmembrane [... [more]
WP_069656164.13.900e-5344.83hypothetical protein [Vulcanibacillus modesticaldu... [more]
WP_068724060.11.100e-5245.59hypothetical protein [Tepidibacillus decaturensis]... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003540NSK003540Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03240.1NO05G03240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584678gene_3132Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100120g3gene2487Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03240.1NO05G03240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03240 ID=NO05G03240|Name=NO05G03240|organism=Nannochloropsis oceanica|type=gene|length=2650bp
CTCGAAGTGTGTGTCCCCAGGGCACACCATGCCTGCATCAGCACAGTCGT
TCCACCTCTTTGCTGGTGGCTGCAACAGGTGAAATGTGTTTACGATGTTG
TCATTGGATAAGCCTAAACATCTGCTTGTTGGCAGCAAGCAAGATCATTC
TTCCACCACCTCACTAATCTCCCAATGCCCACACCTCAACCACCAGGACA
CAGCGCAACAAGGATTAGACCACGCCCATACGTCAGGAGTAGGTCGCTCA
ATAGGTTACTGCAGACACGGTAGGCGACCGCCTCTTTCTTGGTGCGCCGC
GGCTAGACAGCCTTACCACTGCCGTTGTCCCGGACGACGCCGGCAGCATT
TCCAACCCACACAACGACTCCCCGCACCACCATCATGGAGCTGCCCGGTC
AGATGGACGGTCACTCTAATGGGCACGCTAACGGAAATGGCTTTCATGCC
ACGGAGAAGACGTGCTTAGTCCAGGCAGCTCAGCATGCCTACCGACTAAA
TGATATCGAGGCTTCCCGgtacgtacaaccaaagaagagagcaggcgaat
agcaatgcacttgtgaatggggcggagatgaagggtacatgcgagtggat
acggatgtagataactgcagaggtgatgttattaatcattggttttcggc
ctcccgtctcgggtgcttttgctgaaaagtcccatgtaacacgaaccatt
ctggacgtgcgtcgacttcctgtcggcatgatgtccctcattgcccgcaa
tcccttcccctccggctcctttggatcttgtccatcccttcatatatttt
tttcggagtcgagtcccggatgctttttgtaagcaacccttctggtttgt
gctcaactccctccctccctctgttcctcttcacctcacctctgcagACT
AATCCACGAGCAGAAATTTGAGGCGAAGAATCACGACGAGACGCATGATG
CTGTGGGAGACTATGTCAAATCCATGATTTTTGGGGGACTGGACGGCATC
CTGACTTCCTTCGCCATTGTTGCTGGCGCGGCTGGAGGTGGGCTGCCGGT
TGAGGTGGTAATGGTGTTAGGGTTCAGCAATATATTCGCGGATGCTTTCA
GCATGGGTATGGGGGAGTATCTGAGCAGCAAGGCGCACAATGAGTTTGTG
TTGAAGGAGAAAGAGAGGGAGAGTTGgtgagtgtccttatgagggaggag
ggagggagggaggtggtagtggatgcaagtggtgaatttgcaatcgcagc
aacggcaccttttttagtcctgacattgctgaccggaagagattgatcgg
catcacatgttattatctgatcttgcaaggttagatgcacacaaactcgc
tgaaagcctcctctctctccatcttcttacctctcttacttcagGGAGCT
GCAAAATTTCCGGGAAGGAGAAATAAAAGAGATGATCGATATTTATGTGG
AGAGAGGGATGGAGGCAGATGATGCCGAGgtacgtgcatataatatctga
gggtatacgtagatggaagtggaggagattgtgcgttatgtttttccttt
tattgagcgttgtgcatttgttttcttcccttttttgtgccttgggaggg
agtgcttgagaattagagcgcggggtggaggaagtgtgagggcgggtggc
acagacgtgcgttttcatgctcgaaagataagaagaaagaggatagggat
gtggacgacgaagtacgggagtggcgactgttttgttgtctccaagccgc
ttgatgtgattccttcgttcaccctctctcgctctctcactcttcttctc
acagGACGTGGTGCGGAAGATGAGCAAGTACGACAACTTTTTTGTCAACG
TGATGATGGTGGAGGAGCTGGGGCTGCAAGTGCCAGATCCAGACGACGAT
ATCGTCAAGGAAGGGGTTGTGATGTTTTTGGCCTTTGCGGGGTTTGGTGC
GATGCCCCTGTTGGGCTACGCGCTGATTCCTTTGTGTTTCCCGCATTTTG
GACCGAAGGCCTTATTCAATGTTGCGTGCATTGTGACTGCGCTGACGTTA
TTTGTGATGGGCGCGGTGAAGAGCAAGTTTTCTACGCGGGGATGGCTGCA
CTCGGGGATGGAGATGTTGGTGCTGGGAGGGGTGTGTGCGCTGATGGCGT
ATGAAATCGGGCACTTGGTCAGCAGTCTGGTGGGAGTGGGGGAGGTATAG
GGAGAGCGGATAAAGGAAGACAAGAGGGCGAGAGTGACAGGAAATGTGAG
TGGAGAAGAACTGTGCCTGTCGGTGAATAGAAAGGGGAATATTTTTGGAT
GGAGGGATGCACGAAGGCCATGGCAGGCGAGGCAGAGGCTAATGAAACTG
CGCATAAAGGAAGGAAGGGAAACAGAAGCAGCAGCCGGACAGCGGCAGGA
TTAAGAATAATCGAGGGTGAGATGGTAAATGGTGGTCGTCAGATTTCTAT
ACATACAGCAATCCAACCATAGTGTCGAAATGTTTTGTGCAAGCAATAAT
CAACCTCATCCAAAAAGATAAGCTACAAACGAAGAAAAAGGCGGTGATGG
ACCGAGAACGATACAAGACAGAAGACGAAAGAGAAGACGAAAGAGAAGAA
AAGGAGGTGAAGAGAAAAAGAAGGAAAACAGCACGGAATATTTGTTCGCA
back to top

protein sequence of NO05G03240.1

>NO05G03240.1-protein ID=NO05G03240.1-protein|Name=NO05G03240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MELPGQMDGHSNGHANGNGFHATEKTCLVQAAQHAYRLNDIEASRLIHEQ
KFEAKNHDETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVM
VLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKE
MIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIV
KEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFV
MGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVGVGEV*
back to top
Synonyms
Publications