NO05G03220, NO05G03220 (gene) Nannochloropsis oceanica

Overview
NameNO05G03220
Unique NameNO05G03220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1775
Alignment locationchr5:834723..836497 +

Link to JBrowse

Properties
Property NameValue
DescriptionPyridoxamine 5-phosphate oxidase-related fmn-binding protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:834723..836497 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019595DUF2470
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO05G03220 vs. NCBI_GenBank
Match: EWM28087.1 (pyridoxamine 5 -phosphate oxidase-related fmn-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 483.4 bits (1243), Expect = 6.200e-133
Identity = 241/276 (87.32%), Postives = 262/276 (94.93%), Query Frame = 0
Query:   91 AHPIRLSISERARTVTYVATAATLGTFSESDTTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANPQVSLFVQMPKTGKGDTSTSAALSRVTLIGNIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLRVTSGELTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIEELPPVIRYAEDILRKRG 367
            A PIRLS+SERARTVTYVATAATLGTFSE+ +TPFGSYVDYILDDKGWPVLLLS+QSLHTQNI+ NPQVSLFVQMP++GK D + SAALSRVTLIG+IVPVEAEELPAIRTAYSIVHSYSERLVESPKFSF KL+PERVYFVGGFGV SKW+ V++YE AVPD+LAHEM+RIVAR+N EHE ELRLMCRHFLGA++VDQVTATTVDRLGIDLRVT+GELTDEYRVGFREKV STEDAKSELVKMFQEAWEREHDYAW +ELPPVIRYAEDILRK+G
Sbjct:   95 ARPIRLSLSERARTVTYVATAATLGTFSEAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKAD-AASAALSRVTLIGSIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILRKKG 369          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: CBN73853.1 (Pyridoxamine 5'-phosphate oxidase-related [Ectocarpus siliculosus])

HSP 1 Score: 316.2 bits (809), Expect = 1.300e-82
Identity = 156/276 (56.52%), Postives = 215/276 (77.90%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSES-----DTTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANPQVSLFVQMPKTGKGDTSTSAALSRVTLIGNIVPV-EAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLRVTSGELTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIEELPPVIRYAEDILR 364
            I LSI+ERARTVT+VA + TL T S S     + +PFGS+VDY+LD++GWP+ LL++ SLHTQNIKA+ +VSL  Q P+   G     AAL+RVTL+G IV V + +EL  ++ ++S+VH+Y+++L +SP+F FYKL+P++VY+VGGFGVLSKW+PV+EYETA PDILA E S IV+++N   + +L+ +C+HFL     D V  TTVDRLG+DLRV + +LTDE+R+GFR+ V+S EDAKSE+VK+FQEAWE+E+ + W ++ PP+ RYAEDILR
Sbjct:   23 IILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPREANG--QPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVSKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 296          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: EJK61026.1 (hypothetical protein THAOC_18545 [Thalassiosira oceanica])

HSP 1 Score: 246.1 bits (627), Expect = 1.700e-61
Identity = 139/290 (47.93%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSESDT---TPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANPQ---VSLFVQM-PKTGKGDTSTSAALSRVTLIGNIVPVE--AEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLRVTSGE-------LTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAW-IEELP----PVIRYAEDIL 363
            IRL++ E+ARTVT V T+ TL T S  D     PFGS+VDY+LDD G PVLL+++ S+HT NI+   +   V+LF Q+   T  G  +    +SR ++ G I  +E  AE+   IR  Y I H+Y++++++SPKF FY+L P ++YFVGGFGV S+W+P  EY  A PDILA E SRI+ R+N +H  +L L     L   EV++V  T VDRLG+D+RVTS         LTDE+RVGFR  V S EDAKSE++K+FQEAWE+++   W  +E+P    PV++ AED L
Sbjct:   74 IRLNVPEKARTVTSVCTSGTLCTQSYMDDIEGAPFGSFVDYVLDDNGNPVLLMNEMSMHTVNIQKAGEGVLVTLFAQLGGPTSSGQPAHGQDVSRCSITGTIAKIEPTAEDWDVIRMRYGIAHTYADQVMDSPKFHFYRLVPTKIYFVGGFGVSSEWVPPEEYTAATPDILAKESSRIMGRLNRDHAEDLLLTATEILDVNEVEKVRVTGVDRLGMDMRVTSRVPRRKNKLLTDEFRVGFRIPVISVEDAKSEILKVFQEAWEKKNGVTWGDDEIPGADVPVLKTAEDNL 363          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: XP_002288262.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93698.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 245.0 bits (624), Expect = 3.700e-61
Identity = 137/291 (47.08%), Postives = 195/291 (67.01%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSESDT---TPFGSYVDYILDDKGWPVLLLSDQSLHTQNI-KANPQ--VSLFVQM--PKTGKGDTSTSAALSRVTLIGNIVPVE--AEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLRVT-------SGELTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIEE-LP----PVIRYAEDIL 363
            IRL++ E+ARTV  V T+ TL T S  D     PFGS+VDY+LDDKG PVLL+++ S+HT NI K+ P+  V+LF Q+  P +  G  +    +SR ++ G I  +E  AE+  AIR  Y I H+Y++++++SPKF FY+L P+++Y+VGGFGV S+W+P  EY  A PDILA + S I+ R+N +H  +L L     L  +EVD+V  T VDRLG+D+RVT       S  +TDE+RVGFR  V S EDAKSE++K+FQEAWE+++   W ++ +P    P+++ AED L
Sbjct:   61 IRLNVPEKARTVISVCTSGTLCTASHMDDIQGAPFGSFVDYVLDDKGNPVLLMNEMSMHTVNIQKSGPEGLVTLFAQLGGPTSSSGVATQGQDVSRCSVTGTIEKIEDTAEDWDAIRMRYGIAHTYADQVMDSPKFHFYRLSPKKIYYVGGFGVSSEWVPPEEYSEATPDILAKDASGIMTRLNRDHAEDLMLTATQILEVKEVDKVRVTGVDRLGMDMRVTCRDPRRKSKLITDEFRVGFRIPVISVEDAKSEVLKVFQEAWEKKNGVTWGDDAVPGADIPMLKTAEDSL 351          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: GAX17481.1 (hypothetical protein FisN_5Hh133 [Fistulifera solaris])

HSP 1 Score: 231.9 bits (590), Expect = 3.200e-57
Identity = 139/317 (43.85%), Postives = 198/317 (62.46%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSES---DTTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIK---------ANP--QVSLFVQM----------PKTGKGDTSTSA-----ALSRVTLIGNI--VPVEAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFL-----GAQEVDQVTATTVDRLGIDLRVTSGE-------LTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIE-ELP----PVIRYAEDIL 363
            IRL++ E+ARTVT V T+ TL T S     D +PFGS+VDY+LDD G PV L+++ S+HT NIK          NP   V+LF Q+          P  G G +S         +SR +L G +  + V+A ++ AIR  YSI H Y++++++SPKF+FY+L P+++YFVGGFGVLS W+   +Y+ A PDILA + + I AR+N +H+ +LRL  +H L      A  ++ V  TTVDRLG+DLRVT+ +        TDE+R+GFR  V S EDAKSE++K+FQEAWE+ +   W + E+P    P+++ A D L
Sbjct:   58 IRLNVYEKARTVTSVCTSGTLCTISSHEGIDGSPFGSFVDYVLDDDGNPVFLMNEMSMHTINIKNAQQRMKDDNNPSAMVTLFTQLGGNTNNNHDGPSFGPGSSSNLGNKGLQDVSRCSLTGRLEKLTVDAPDMDAIRMRYSITHVYADQVMDSPKFAFYRLIPDKIYFVGGFGVLSTWVDPEDYKNANPDILATQAAGICARINRDHDEDLRLTAQHLLNIAPKNADAIESVRVTTVDRLGMDLRVTAQQGTRRNKLQTDEFRIGFRIPVQSVEDAKSEILKIFQEAWEKGNGVEWGDNEVPGESVPIMKIAADSL 374          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: GAX13960.1 (hypothetical protein FisN_5Lh133 [Fistulifera solaris])

HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56
Identity = 137/317 (43.22%), Postives = 196/317 (61.83%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSES---DTTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIK---------ANP--QVSLFVQM----------PKTGKGDTSTSA-----ALSRVTLIGNI--VPVEAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFL-----GAQEVDQVTATTVDRLGIDLRVTSGE-------LTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIE-ELP----PVIRYAEDIL 363
            IRL++ E+ARTVT V T+ TL T S     D +PFGS+VDY+LDD G PV L+++ S+HT NIK          NP   V+LF Q+          P  G G +S         +SR +L G +  +  +A ++ AIR  YSI H Y++++++SPKF+FY+L P+++YFVGGFGVLS W+   +Y+ A PDILA + + I AR+N +H+ +LR   +H L      A  ++ V  TTVDRLG+DLRVT+ +        TDE+R+GFR  V S EDAKSE++K+FQEAWE+ +   W + E+P    P+++ A D L
Sbjct:   60 IRLNVYEKARTVTSVCTSGTLCTISSHEGIDGSPFGSFVDYVLDDDGNPVFLMNEMSMHTINIKNAQQRMKDDNNPAAMVTLFTQLGGNTNNNNDGPSFGPGSSSNLGNKGLQDVSRCSLTGRLEKLTADAPDMDAIRMRYSITHVYADQVMDSPKFAFYRLIPDKIYFVGGFGVLSTWVDPEDYKNANPDILATQAAGICARINRDHDEDLRFTAQHLLNIAPKNADAIESVRVTTVDRLGMDLRVTAQQGTRRNKLQTDEFRIGFRIPVQSVEDAKSEILKIFQEAWEKGNGVEWGDNEVPGESVPIMKIAADSL 376          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: XP_002183457.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45157.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 223.0 bits (567), Expect = 1.500e-54
Identity = 132/301 (43.85%), Postives = 184/301 (61.13%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSESD---TTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANPQ----------------VSLFVQM---------PKTGKGDTSTSAA------LSRVTLIG---NIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQ-EVDQVTATTVDRLGIDLRVTSGE-------LTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIE 350
            IRL++SE+ARTVT V  + TL T S  +     PFGS+VDY+LDD+G PVLL+++ S+HT NI+   Q                V+LF Q+         P+T  G  S +A       +SR +L G    I P    ++ AIR  YS+ H+Y++++++SPKF+FY+L PE++YFVGGFGV++KW+   +Y  A PDILA E S IVA++N EH  +L+   RH L  +  ++ +  T VDRLG+DLRVTS +        TDE+R+GFR  V S EDAKSE++K FQEAWE  +   W E
Sbjct:   93 IRLNVSEKARTVTSVCVSGTLCTVSVHEGIAGAPFGSFVDYVLDDQGNPVLLMNEMSMHTINIQNAAQTLLDASGTAIGPGPSMVTLFTQLGSGTTSLSPPRTAAGGASGTAKSNNLQDVSRCSLTGTLYKIDPAVDSDVDAIRMRYSLTHTYADQVMDSPKFAFYRLVPEKIYFVGGFGVMAKWVDPEDYAAAAPDILAKEASAIVAKLNREHGEDLQNTARHLLRVETPLEDIRVTNVDRLGVDLRVTSQKGSRRNKLQTDEFRIGFRIPVISVEDAKSEILKTFQEAWEIGNGMDWGE 393          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: OEU19973.1 (hypothetical protein FRACYDRAFT_167870 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 220.7 bits (561), Expect = 7.500e-54
Identity = 122/286 (42.66%), Postives = 182/286 (63.64%), Query Frame = 0
Query:   94 IRLSISERARTVTYVATAATLGTFSESD---TTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANP------------QVSLFVQMPKTGKGDTS-TSAALSRVTLIGNI--VPVEAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLRVTSGE-------LTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIE-ELPP 354
            +RL+++E+ARTV  V T+ TL T S  +     PFGSYVDY+LDD G PVLL++D S+HT NI+ N              V+LF Q+      DTS  S  +SR +    +  +P ++ ++  +R  YSI H Y++++++SP FSFY+L PE++YFVGGFGV++KW+ + +Y+ A PDIL+ + + IV ++N E   +L  M  H LG  +++ +  T VDRLG+D+RVT  +       +TDEYR+GFR  V S EDAKSE++K+FQE+WE+     W + + PP
Sbjct:   93 LRLNVNEKARTVASVCTSGTLCTVSGHEGIQGAPFGSYVDYVLDDGGNPVLLMNDMSMHTINIEQNALNNEDGSNGASNLVTLFTQL----ASDTSEQSQDVSRCSFTCKVEKIPDDSPDMDILRMRYSITHVYADQVMDSPIFSFYRLVPEKIYFVGGFGVIAKWVDIGDYKNAAPDILSKDAAIIVKKLNREFTEDLEGMATHLLGVDKLEYIRVTNVDRLGMDVRVTRQQGTRRNKLMTDEYRIGFRIPVISVEDAKSEILKVFQESWEKGEGVDWGDADTPP 374          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: OSX69562.1 (hypothetical protein BU14_1393s0002 [Porphyra umbilicalis])

HSP 1 Score: 194.5 bits (493), Expect = 5.700e-46
Identity = 114/275 (41.45%), Postives = 163/275 (59.27%), Query Frame = 0
Query:   95 RLSISERARTVTYVATAATLGTFS-ESDTTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANPQVSLFVQMPKTGKGDTSTSAALSRVTLIGNIVPVEA---------EELPAIRTAYSIVHSYSERLVESP-KFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLR-VTSGELTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDY--AWIEELPPVI 356
            RL++ ERARTV +V    TL T S +    PFGS+VDY+LD  G PV+LL+  + H++N+  +  VSL+ Q P+   G         R TL+G + P+ A         EE+  +  AY+  H ++ + +  P +F+F+++  E VYFVGGFGV + W+ V +Y  A  D LA +   +V+  N   + ELR MCR FLG  + + VT   +DRLG+DLR VT+   T E+RV FREKV    DA+S LVK  QE+WE+E+ +  AW EE P V+
Sbjct:  107 RLTVGERARTVVHVCRTGTLSTSSVKHGGVPFGSHVDYVLDGAGRPVMLLAVDAAHSKNLVESNMVSLYAQ-PQESSGQGG-----CRATLVGRLAPLAAADGVDGADEEEVAELVEAYTERHPHAAKALTYPDRFNFFRMSVEDVYFVGGFGVTATWVAVEDYSNASADPLAFDAPSMVSTTNKRQQKELRSMCRVFLGVDDAETVTMMALDRLGVDLRVVTTSGATSEFRVAFREKVACRFDAQSALVKALQESWEKENGFGDAWEEETPRVV 375          
BLAST of NO05G03220 vs. NCBI_GenBank
Match: XP_005706921.1 (FMN binding protein [Galdieria sulphuraria] >EME30401.1 FMN binding protein [Galdieria sulphuraria])

HSP 1 Score: 192.6 bits (488), Expect = 2.200e-45
Identity = 113/269 (42.01%), Postives = 160/269 (59.48%), Query Frame = 0
Query:   95 RLSISERARTVTYVATAATLGTFS-ESDTTPFGSYVDYILDDKGWPVLLLSDQSLHTQNIKANPQVSLFVQMPKTGKGDTSTSAALSRVTLIGNIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETAVPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGIDLRVTSGELTD--EYRVGFREKVTSTEDAKSELVKMFQEAWEREHDY--AWIEELP-PVIRY 358
            RLS  E+ARTV  V    TL T S E D TPFGS+VDYILDD G P++LL+  + H +N++ + + SLF Q P    G +       R TL+G +V +  E++  +  AY   H ++   ++ P+FSFY+++   VYFVGG+GV + W+   EY ++ PD LA +   ++  MN +H  +L   C  FL  + ++Q     VDRLG D+RV   E TD  EYR+GFRE V ++ DA+S LV+  QEAWE E+ Y   W EE P P + Y
Sbjct:   92 RLSFGEQARTVVQVCKTGTLCTSSVEHDDTPFGSHVDYILDDFGRPIVLLAQNAAHMRNLRKSQKCSLFCQ-PVASSGQSG-----CRATLVGFMVKLPLEQVSEVMEAYIDTHPHAAIALKYPEFSFYRMEVCDVYFVGGYGVAATWVDPKEYISSEPDPLAFQSQDLLKLMNSDHMEDLLRFCNVFLHLKNIEQCEIVMVDRLGFDMRVQLSE-TDIREYRIGFREHVVTSLDAQSALVQAMQEAWELENGYEKLWSEETPRPAVLY 353          
The following BLAST results are available for this feature:
BLAST of NO05G03220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28087.16.200e-13387.32pyridoxamine 5 -phosphate oxidase-related fmn-bind... [more]
CBN73853.11.300e-8256.52Pyridoxamine 5'-phosphate oxidase-related [Ectocar... [more]
EJK61026.11.700e-6147.93hypothetical protein THAOC_18545 [Thalassiosira oc... [more]
XP_002288262.13.700e-6147.08predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX17481.13.200e-5743.85hypothetical protein FisN_5Hh133 [Fistulifera sola... [more]
GAX13960.12.700e-5643.22hypothetical protein FisN_5Lh133 [Fistulifera sola... [more]
XP_002183457.11.500e-5443.85predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU19973.17.500e-5442.66hypothetical protein FRACYDRAFT_167870 [Fragilario... [more]
OSX69562.15.700e-4641.45hypothetical protein BU14_1393s0002 [Porphyra umbi... [more]
XP_005706921.12.200e-4542.01FMN binding protein [Galdieria sulphuraria] >EME30... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003543NSK003543Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03220.1NO05G03220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584663gene_3128Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100120g6gene2484Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03220.1NO05G03220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03220 ID=NO05G03220|Name=NO05G03220|organism=Nannochloropsis oceanica|type=gene|length=1775bp
AGGAAAGCCAGCCAATGAGAAGACCAGCAAATACGGCATGGTTGGCGGCC
CTAGGAAGCTTGCTCCTGCTCCCTTGCGCCATGGCCTTCCTGGCCGTGCC
CCTCCGCAGCCGGAGCCGGCAACATCCTGGCGgtacgtatactattatgc
atggttggcgaggaaggtgtgaggcaggagggaagagatgggggaggaca
ttggctgtggctgttgtgacgaagacaagcaggctcctctttcttctggt
tcccaagccccgctgctaccatcatatcgtgcacaggcgggcaggggtca
ataggagggggatggattgatggtcctgacggaaaccctttgatagagcc
acaagcgtggcatgtgtgtggagtttcagaagccctgttgtcgaaacccg
acgctctattgcccccccttctccgggagaaaacaaaagggaatcacatt
atgtatacccataactctacaccacgaggaggttgatcgcgtcaatttac
tccaaatgacaatcaattcaccgtcgccctccccctacttcctctctttt
cctccctttatacagCTGTCCTGTCCTCTTCACCCTCCCCCTCCCGTCTC
CATGCGGTTGCCACCGTCGCCCCCGTCCAAGCCAACCCTAGCACAAGTAG
CAGCACACCACAGGACCAACAGCAACAAGAACAGCAGCAGCAGCCCGCGG
GTGATGGGTTTGGAGGCGCCCACCCTATCAGGCTGAGTATATCGGAAAGG
GCAAGAACGGTGACGTACGTGGCGACGGCTGCTACGCTGGGCACATTCAG
TGAGTCAGACACGACGCCTTTTGGAAGCTATGTCGATTATATCTTGGACG
ATAAGgtgaggaagtaggaggtttgggaaggatagagggaagtatagagg
gaaggatagagggaaggatagagggggatggtaatttgtattcctctgtt
atggccaactcaaaattgtcagacatggcttcgtgcatcgagttgtcctc
gcttcctcaccatctcaccctcccaccatcgctcccttcctccctttctt
ttctcgctagGGCTGGCCCGTCCTCCTCCTCTCCGATCAATCCCTCCACA
CGCAAAACATTAAAGCCAACCCCCAAGTCAGTCTCTTCGTCCAAATGCCC
AAAACCGGCAAAGGGGACACGAGCACGTCCGCCGCGCTCTCCCGTGTCAC
GTTGATCGGTAACATCGTCCCCGTAGAGGCGGAGGAGCTCCCGGCCATCC
GCACGGCGTACAGCATCGTGCATTCCTACTCCGAGCGACTGGTGGAATCA
CCCAAGTTTTCCTTCTACAAGCTACAGCCGGAGCGCGTGTACTTCGTGGG
GGGCTTTGGCGTTTTGAGCAAGTGGATCCCAGTGGCTGAGTACGAGACGG
CCGTGCCTGACATCTTGGCCCATGAGATGTCGCGGATCGTAGCGAGGATG
AACGGGGAGCACGAGGCAGAGCTGCGGCTCATGTGTCGCCATTTTCTTGG
CGCGCAGGAGGTGGACCAGGTGACCGCCACCACAGTTGACAGGCTCGGGA
TTGACCTGAGGGTAACGTCCGGGGAATTAACGGACGAGTACCGGGTCGGG
TTTAGGGAAAAAGTGACAAGCACGGAGGACGCTAAGAGCGAGCTGGTGAA
GATGTTCCAAGAGGCGTGGGAGAGGGAGCATGATTATGCCTGGATTGAGG
AGTTACCGCCTGTGATTAGATATGCAGAGGATATTTTGAGAAAGCGGGGT
TAGAGGAAAGAAGAAAGGGAGGGAG
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protein sequence of NO05G03220.1

>NO05G03220.1-protein ID=NO05G03220.1-protein|Name=NO05G03220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MRRPANTAWLAALGSLLLLPCAMAFLAVPLRSRSRQHPGAVLSSSPSPSR
LHAVATVAPVQANPSTSSSTPQDQQQQEQQQQPAGDGFGGAHPIRLSISE
RARTVTYVATAATLGTFSESDTTPFGSYVDYILDDKGWPVLLLSDQSLHT
QNIKANPQVSLFVQMPKTGKGDTSTSAALSRVTLIGNIVPVEAEELPAIR
TAYSIVHSYSERLVESPKFSFYKLQPERVYFVGGFGVLSKWIPVAEYETA
VPDILAHEMSRIVARMNGEHEAELRLMCRHFLGAQEVDQVTATTVDRLGI
DLRVTSGELTDEYRVGFREKVTSTEDAKSELVKMFQEAWEREHDYAWIEE
LPPVIRYAEDILRKRG*
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Synonyms
Publications