NO05G02880, NO05G02880 (gene) Nannochloropsis oceanica

Overview
NameNO05G02880
Unique NameNO05G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1887
Alignment locationchr5:755487..757373 -

Link to JBrowse

Properties
Property NameValue
DescriptionEstradiol 17-beta-dehydrogenase 12-b
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:755487..757373 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO05G02880 vs. NCBI_GenBank
Match: EWM28226.1 (estradiol 17-beta-dehydrogenase 12-b [Nannochloropsis gaditana])

HSP 1 Score: 570.1 bits (1468), Expect = 5.300e-159
Identity = 280/350 (80.00%), Postives = 312/350 (89.14%), Query Frame = 0
Query:   29 MGLDVKEKALLSFVAKVTLPLVAVLGPIVAYTGIWEHPLWVLGLMTAGVYTAKLLSYVAERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELPESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMNKTRMRSLSKKQGQKQGTSSAQ 379
            MGLDVKEKALL+F+AKVT PLV V+GP +AYT IWEHP W LGL+T  V T K L Y+ ERLTR RKD+   YGKWAIVTGATSGIGEAFAHELA RGM+VLIISRTPAKLEKT+ ++LR APEGVEVEVLA+DFT M +ADAFY RL EVA +LHK+GGIGML+NNVGTNVE+PEFLH LPESE+L+IVRVNVEGTVRMTR +LPFMA+R  GAI+NVSSGSGNHPTPLLSTYAATKAFINEFSRSLH+EAKHVG+DVL+ TPYYVSTPGMYNKPPGLLNCS+ R VQDTL VLGRYD  YPYIAHA+LGTLMDKYWATPAALFKSMNKTRMR+L+K+Q QK+ +SS Q
Sbjct:    1 MGLDVKEKALLTFIAKVTFPLVVVMGPFIAYTRIWEHPFWFLGLVTFAVLTTKALYYLLERLTRRRKDLPREYGKWAIVTGATSGIGEAFAHELAQRGMSVLIISRTPAKLEKTKADILRNAPEGVEVEVLAFDFTCMPKADAFYLRLREVAASLHKRGGIGMLINNVGTNVEVPEFLHALPESEVLDIVRVNVEGTVRMTRTVLPFMADRRAGAIINVSSGSGNHPTPLLSTYAATKAFINEFSRSLHYEAKHVGIDVLVATPYYVSTPGMYNKPPGLLNCSSHRFVQDTLNVLGRYDSVYPYIAHAILGTLMDKYWATPAALFKSMNKTRMRALAKRQQQKEDSSSTQ 350          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: EWM28067.1 (estradiol 17-beta-dehydrogenase 12 [Nannochloropsis gaditana])

HSP 1 Score: 299.3 bits (765), Expect = 1.700e-77
Identity = 161/349 (46.13%), Postives = 231/349 (66.19%), Query Frame = 0
Query:   29 MGLDVKEKALLSFVAKVTLPLVAVLGPIVAYTGIWEHPLWVLGLMTAGVYTAKLLSYVA--ERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELPESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMNKTRMRSL---SKKQGQKQ 373
            M LDVKEK L+ F+AK  +P++ +     +Y  +W  P+ +LG     ++  K+   V    R+    +D + SYGKWAIVTGAT+GIGEAFA+ELA  GMNV+IISR+  KLE+ ++ +L+ +P   E+  +AYD+T    A+AF+ +LSE     H +GG+G+LVNNVG    IPE++H L +     I++VNVEGTVR TRAI P + ++  GAI+NVSSGSGNHPTP++S YA+TK+FI +FS+ L HE +  GVDVL++TPYYV +     K    +  +AQR+VQDTL +LG  D+A+PY  HA+ G  +  YW    ++  +M + R R L   +KK+G+K+
Sbjct:    1 MALDVKEKNLIKFIAKRLIPILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPL-SYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESP-AAEIRCMAYDYTDREGAEAFFMKLSE--TCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARILEAAAKKEGKKE 345          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: NP_001017234.1 (very-long-chain 3-oxoacyl-CoA reductase [Xenopus tropicalis] >Q28IU1.1 RecName: Full=Very-long-chain 3-oxoacyl-CoA reductase; AltName: Full=17-beta-hydroxysteroid dehydrogenase 12; Short=17-beta-HSD 12; AltName: Full=3-ketoacyl-CoA reductase; Short=KAR; AltName: Full=Estradiol 17-beta-dehydrogenase 12 >CAJ83357.1 hydroxysteroid (17-beta) dehydrogenase 12 [Xenopus tropicalis])

HSP 1 Score: 176.8 bits (447), Expect = 1.300e-40
Identity = 117/312 (37.50%), Postives = 170/312 (54.49%), Query Frame = 0
Query:   68 WVLGLMTA---GVYTAKLLSYVAERLTRGRKDMVG-SYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELP--ESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKY--WATPAALFKSMNKTRMRSLSKKQGQK 372
            W LG++ A   G+  A  L   A     G    VG   GKWA+VTGAT GIG+A+A ELA RGMN+++ISR+P KLE+  +++  +    VE +++A DF +  E    Y R+      L     IG+LVNNVG + E PE+  E+P  E+ +  ++ +N+    +MTR +LP M  R  G I+N+SS SG +P PLL+ Y+ATKAF++ FSR L  E +  GV V  + P+YV+T     + P     S +  VQ  L  +G       Y+ HA++G +       +T  +L   MNK       K+  QK
Sbjct:   18 WYLGVVAAVWWGLRAAWCLLDGARVWVLGSGAQVGPRIGKWAVVTGATDGIGKAYAEELAKRGMNIVLISRSPEKLEEVAKQIKEKFK--VETKIIAADFGKPTE---IYGRIESGLRDLE----IGVLVNNVGVSYEHPEYFLEIPDLENTLDKMININITSVCQMTRLVLPGMLGRGRGVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLQAEYRSKGVTVQSVLPFYVATKLAKIRKPTWDKPSPETYVQSALNTVGLQTQTNGYLPHAIMGWISTSLVPVSTAISLGMKMNKGLRARFLKRAKQK 320          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: XP_007574621.1 (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase [Poecilia formosa] >XP_014826347.1 PREDICTED: very-long-chain 3-oxoacyl-CoA reductase [Poecilia mexicana])

HSP 1 Score: 176.4 bits (446), Expect = 1.700e-40
Identity = 118/323 (36.53%), Postives = 173/323 (53.56%), Query Frame = 0
Query:   64 EHPLWVLGLMTAGVYTA----KLLS-YVAERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELP--ESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMNKTRMRSLSKKQGQKQGTSSAQG 380
            E PL+ LG +TA   +     +LLS +    L  GR       GKWA+VTGAT GIG+A+A ELA RG  +++ISR+  KL+   + +  +   GVE + +A DF+    A   YA++ E    L     IG+LVNNVGT+   PEF   +P  ++ I  ++ +N+    +MTR +LP M ER  GAI+N+SS SG +P PLL+ Y+A+KAF++ FSR L  E K  G+ +  + P+YV+T     + P L   S +R V   L  +G       Y+ HA++G      W T A L   M  + +  +   Q  +      QG
Sbjct:   13 EAPLFWLGALTAAWLSVCSVYRLLSGFRVWVLGNGRLISPNKLGKWAVVTGATDGIGKAYAEELARRGFAIILISRSQEKLDDVSKAIASKC--GVETKTIAADFS----AIDIYAKIEEGLAGLE----IGVLVNNVGTSYSYPEFFLNVPNLDTFIDTMININITSVCQMTRLVLPQMVERKKGAILNISSASGMYPVPLLTVYSASKAFVDFFSRGLQAEYKSKGIIIQSVLPFYVATKLSKIRRPTLDKPSPERYVAAELNTVGLQTQTNGYLPHAIMG------WVTTALLPAKMLNSYVMGMGLSQRARYLKKQKQG 319          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: XP_012709708.1 (very-long-chain 3-oxoacyl-CoA reductase-B [Fundulus heteroclitus])

HSP 1 Score: 176.0 bits (445), Expect = 2.200e-40
Identity = 117/323 (36.22%), Postives = 173/323 (53.56%), Query Frame = 0
Query:   64 EHPLWVLGLMTAG----VYTAKLLS-YVAERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELP--ESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMNKTRMRSLSKKQGQKQGTSSAQG 380
            E PL+ LG +TA         +LLS +    L  GR     + GKWA+VTGAT GIG+A+A ELA RG ++++ISRT  KL++  + +  +   GVE + +A DF+    A   Y ++ E    L     IG+LVNNVG +   PEF   LP  ++ I  ++ +N+    +MTR +LP M ER  GAI+N+SS SG +P PLL+ Y+A+KAF++ FSR L  E K  G+ +  + P++V+T     + P L   S +R V   L  +G       Y+ HA++G      W T A L   M  + +  +   Q  +      QG
Sbjct:   13 EAPLFWLGALTAAWLSVCSVCRLLSGFKVWVLGNGRLVSPNNLGKWAVVTGATDGIGKAYAEELARRGFSIVLISRTQEKLDEVSKAISSKC--GVETKTIAADFS----ATDIYTKIEEGLAGLE----IGVLVNNVGISYTYPEFFLNLPNLDTFIDTMININITSVCQMTRLVLPQMVERKKGAILNISSASGMYPVPLLTVYSASKAFVDFFSRGLQAEYKSKGIIIQSVLPFFVATKLSKIRRPTLDKPSPERYVAAELNTVGLQTQTNGYLPHAIMG------WVTTALLPAKMLNSYVMGMGLSQRARYLKKQKQG 319          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: XP_014894521.1 (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-B-like [Poecilia latipinna])

HSP 1 Score: 176.0 bits (445), Expect = 2.200e-40
Identity = 118/323 (36.53%), Postives = 173/323 (53.56%), Query Frame = 0
Query:   64 EHPLWVLGLMTAGVYTA----KLLS-YVAERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELP--ESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMNKTRMRSLSKKQGQKQGTSSAQG 380
            E PL+ LG +TA   +     +LLS +    L  GR       GKWA+VTGAT GIG+A+A ELA RG  +++ISR+  KL+   + +  +   GVE + +A DF+    A   YA++ E    L     IG+LVNNVGT+   PEF   +P  ++ I  ++ +N+    +MTR +LP M ER  GAI+N+SS SG +P PLL+ Y+A+KAF++ FSR L  E K  G+ +  + P+YV+T     + P L   S +R V   L  +G       Y+ HA++G      W T A L   M  + +  +   Q  +      QG
Sbjct:   13 EAPLFWLGALTAAWLSVCSVYRLLSGFRVWVLGNGRLISPNKLGKWAVVTGATDGIGKAYAEELARRGFAIILISRSQEKLDDVSKAIASKC--GVETKTIAADFS----AIDIYAKIEEGLAGLE----IGVLVNNVGTSYSYPEFFLNVPNLDTFIDTMININITSVCQMTRLVLPQMVERKKGAILNISSASGMYPVPLLTIYSASKAFVDFFSRGLQAEYKSKGIIIQSVLPFYVATKLSKIRRPTLDKPSPERYVAAELNTVGLQTQTNGYLPHAIMG------WVTTALLPAKMLNSYVMGMGLSQRARYLKKQKQG 319          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: XP_011042342.1 (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Populus euphratica])

HSP 1 Score: 175.6 bits (444), Expect = 2.900e-40
Identity = 95/239 (39.75%), Postives = 144/239 (60.25%), Query Frame = 0
Query:   66 PLWVLGLMTAGVY-----TAKLLSYVAERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELPESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGN--HPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVST 298
            P+W+L   + G       +  LL++V     R +KD+   YG WA++TGAT GIG+AFAH+LA +G+N++++SR P KL+    E+L   P G +++ + +DF+           + +    L+    +G+L+NNVG       F HE+ E   ++IVRVN+EGT R+TRA+LP M +R  GAIVN+ SG+ +     PL + YAATKA++++FSR LH E K  G+ V    P YV+T
Sbjct:   13 PMWLLLFSSLGFISFLKTSTLLLNWVYATFLRRKKDL-KDYGSWAVITGATDGIGKAFAHQLAQKGLNLILVSRNPNKLKTVSSEILAEHP-GTKIKTVGFDFSSKVSTRTVQGVIQKAVEGLN----VGLLINNVGITYPAARFFHEVDEKAWMDIVRVNLEGTSRVTRAVLPGMIQRKRGAIVNIGSGASSVMPSHPLFTIYAATKAYVDQFSRCLHVEYKRYGIHVQCQVPLYVAT 245          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: GBG26039.1 (Very-long-chain 3-oxoacyl-CoA reductase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 175.6 bits (444), Expect = 2.900e-40
Identity = 112/317 (35.33%), Postives = 170/317 (53.63%), Query Frame = 0
Query:   65 HPLWVLGLMTAGVYTAKLLSYVAERLTRGRKDMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELPESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMN-----KTRMRSLSKKQGQKQGTSS 377
            H L   G +  G     LL   A++L +G       YGKW +VTGAT GIG+AF  E+A +GMNVL+ISRT +KL    +E+  + P  V+ + LA D++   +A     +++E   AL   GG+G+LVNNVG +   P + HEL + ++  ++ +NV  T  MTR  LP M  +  GAI+N+ S +G HP PLL+ Y+ATKAF+  FS SL+ E    G+ V    P+++ +     K P     +A+   +  L  LG   +  P+  H V   LMD     P +L +S++       R + L K+  +++   S
Sbjct:   11 HVLAAFGALYLGKLGVGLLFSAAKKLVQGGGVNPTKYGKWCVVTGATDGIGKAFCFEMAKKGMNVLLISRTESKLVDCSKEIEAKYP-SVKTKYLAIDYSNFDKAS--QDKVAEAFSAL--DGGLGVLVNNVGMSYPFPLYFHELSDEDVRGLLELNVTSTTIMTRLALPVMLAQKKGAILNIGSAAGLHPNPLLALYSATKAFVEYFSYSLNTEYASKGIFVQCHAPFFIVSKLSKFKRPSAFIPTAEDYARKALTKLGGEPVVSPHAPHQVASYLMD---CIPESLIQSVSLKYHLGIRAKGLRKRAREEESKKS 319          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: OCT82029.1 (hypothetical protein XELAEV_18024537mg [Xenopus laevis])

HSP 1 Score: 175.3 bits (443), Expect = 3.800e-40
Identity = 110/299 (36.79%), Postives = 164/299 (54.85%), Query Frame = 0
Query:   68 WVLGLMTA---GVYTAKLLSYVAERLTRGRKDMVG-SYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELP--ESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPAALFKSMNKTR 361
            W LG++ A   G+  A  L   A     G    VG   GKWA+VTGAT GIG+A+A ELA RGMN+++ISR+P KLE+    + ++    VE +++A DF +  E    Y R+      L     IG+LVNNVG + E PE+  E+P  E+ +  ++ +N+    +MTR +LP M  R  G ++N+SS SG +P PLL+ Y+ATKAF++ FSR LH E +  GV V  + P++V+T     + P     S +  V+  L  +G       Y+ HA++G +        AA+   M   +
Sbjct:   16 WYLGVVAATWWGLRAAWCLLNGARVWVLGSGAQVGPRIGKWAVVTGATDGIGKAYAEELARRGMNIVLISRSPEKLEEAAIHIKQKFK--VETKIIAADFGKPTE---IYERIEAGLRDLE----IGVLVNNVGISYEYPEYFLEIPDLENTLDKMININIMSVCQMTRLVLPGMLGRGKGVVLNISSASGMYPVPLLTVYSATKAFVDFFSRGLHAEYRSKGVTVQSVLPFFVATKLAKIRKPTWDKPSPETYVRSALNTVGLQTQTNGYLPHAIMGWISTSLVPVSAAISMGMKMNK 305          
BLAST of NO05G02880 vs. NCBI_GenBank
Match: OXU24641.1 (hypothetical protein TSAR_008047 [Trichomalopsis sarcophagae])

HSP 1 Score: 175.3 bits (443), Expect = 3.800e-40
Identity = 102/257 (39.69%), Postives = 151/257 (58.75%), Query Frame = 0
Query:   96 DMVGSYGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRAPEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNVEIPEFLHELPESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSGSGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTP----GMYNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLG--TLMDKYW 347
            ++   +G+WA+VTG+T GIG+A+A ELA RGMN++IISRT  +LEKT+ E+L   PE +EV++++ DF++  E    +A++        K   IG+LVNNVG     P +L E+PE E+ +I+ VNV     MTR ++  M +R  GAIVN+SSGS   P PL++ YAATK ++  FS +L  E    GV V  +TP +V+T         +   L    A    ++ +A LG+ D +  Y AH +    TL+   W
Sbjct:   44 ELKSQFGEWAVVTGSTDGIGKAYAKELAARGMNLIIISRTLERLEKTKNEILEINPE-IEVKIISADFSKGRE---IFAKIESQL----KDIPIGILVNNVGKQYTYPMYLGEVPEDELWDIINVNVGAVTLMTRLVIDDMKKRGKGAIVNISSGSELQPLPLMTVYAATKVYVRSFSEALRAEYSKFGVTVQHLTPLFVNTKMNAFSQRLQVSSLFVPDATTYAKNAIATLGKVDTSTGYWAHGIQNFFTLIPPVW 292          
The following BLAST results are available for this feature:
BLAST of NO05G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28226.15.300e-15980.00estradiol 17-beta-dehydrogenase 12-b [Nannochlorop... [more]
EWM28067.11.700e-7746.13estradiol 17-beta-dehydrogenase 12 [Nannochloropsi... [more]
NP_001017234.11.300e-4037.50very-long-chain 3-oxoacyl-CoA reductase [Xenopus t... [more]
XP_007574621.11.700e-4036.53PREDICTED: very-long-chain 3-oxoacyl-CoA reductase... [more]
XP_012709708.12.200e-4036.22very-long-chain 3-oxoacyl-CoA reductase-B [Fundulu... [more]
XP_014894521.12.200e-4036.53PREDICTED: very-long-chain 3-oxoacyl-CoA reductase... [more]
XP_011042342.12.900e-4039.75PREDICTED: very-long-chain 3-oxoacyl-CoA reductase... [more]
GBG26039.12.900e-4035.33Very-long-chain 3-oxoacyl-CoA reductase [Aurantioc... [more]
OCT82029.13.800e-4036.79hypothetical protein XELAEV_18024537mg [Xenopus la... [more]
OXU24641.13.800e-4039.69hypothetical protein TSAR_008047 [Trichomalopsis s... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003624NSK003624Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02880.1NO05G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584548gene_3094Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g168gene2412Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02880.1NO05G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02880 ID=NO05G02880|Name=NO05G02880|organism=Nannochloropsis oceanica|type=gene|length=1887bp
CCTTGACATTATTACGCGCTCGCTGGAATTTGAATCATAAGGGCTTGCTG
CCCGACACCACGTCTAAAGCACCTTGTGCTCCACACGGTATGATAACAAC
TCGGAAATGAAATATACATAGTTAGGGCAGGGAAGCGGGCAAGGCTGTTG
CTGCACCACTTCTTGCTCCTTGCCTTCATGAAGTCGCCTCACTCATCAGT
GACGCCTCCCGTTCCACGCGCACAACTCACACCGCACAGACAGGCAGACG
ATAAAAGGGAAATGGGACTCGACGTGAAGGAGAAAGCACTCCTGAGCTTT
GTAGCCAAGGTGACGCTGCCGCTCGTGGCCGTGCTGGGGCCAATCGTAGC
TTACACTGGCATTTGGGAACACCCTTTGTGGGTCTTGGGGCTGATGACGG
CGGGCGTCTACACTGCCAAGCTCTTATCCTACGTGGCCGAGCGCCTTACG
CGTGGACGCAAAGACATGGTGGGGAGCTATGGAAAGTGGGCTATCGTCAC
GGGCGCCACCTCGGGCATTGGTGAAGCGTTTGCGCACGAGCTGGCCGGGC
GGGGGATGAACGTGCTGATCATTAGTCGCACGCCGGCCAAGCTCGAAAAG
ACCAGGGAAGAGGTTCTCCGGCGTGCTCCGGAAGGCGTGGAGGTGGAAGT
GTTGGCATACGACTTTACCCGCATGGCCGAGGCTGATGCATTTTATGCAC
GCTTGAGTGAAGTGGCGGTGGCGCTGCACAAGAAGGGCGGGATCGGCATG
CTCGTGAATAATGTGGGGACCAACGTGGAAATCCCGGAGTTTTTGCACGA
GCTGCCGGAAAGCGAGATTCTAAACATAGTGCGCGTGAATGTGGAGGGCA
CAGTGCGCATGACACGGGCTATTTTGCCCTTCATGGCTGAACGgtacgtt
tttttgagattttgtttttgttttctggttggtgcctgtgctgttgacct
aaaccttcgtggttcattgtgattagtgggtcgtgtagccagcgtacatt
tgtcccattcactgttgagatgcttttttatgtcgttctttttcggcaaa
tctccgccagactcctcggggggccaaggcagaccagcctgtcttcctcc
tcccccatgtatatctcctggtatcgctctatccctgattgcattcaccg
tacgctcattgtccttctcctttacatcgcgcatacagACACATGGGTGC
CATTGTCAATGTCTCGTCGGGCTCGGGGAACCACCCCACTCCCCTCCTTT
CCACCTACGCAGCCACCAAGGCCTTCATCAACGAATTTTCCCGCTCCCTG
CACCATGAGGCCAAGCACGTGGGCGTTGATGTCCTGCTCATCACCCCCTA
CTACGTCTCCACCCCCGGCATGTACAATAAACCGCCCGGCCTCCTCAACT
GCTCGGCGCAACGCCTTGTTCAAGACACGCTGGCCGTGCTGGGACGGTAC
GACATGGCCTATCCTTACATCGCACACGCTGTCCTGGGCACCCTGATGGA
CAAGTACTGGGCCACGCCCGCAGCGCTATTCAAGTCCATGAACAAAACCC
GGATGCGTTCCTTGTCCAAGAAGCAAGGGCAAAAACAGGGGACCTCGTCG
GCGCAGGGAAAGATCAAGGCCGCTGCTTAAGGTGGTCGCGTGGGGGCGAG
GAATGGGTTCTTTGTGTTGAAAATGACTTTGTGTACCCGGAAGGAAATAG
CGCGACAAATTTCTCAAAGAGGATTAAGGGAAAATATATGACTACGCGCA
AAACTCCTTCAATGCACATTCATGTTCTGAGTTTTCCCCTTGTTTTCGCA
TTGCTTTTCCACCTTATCGGAACGTAAGAAGTGAAACGCAAGAGTAGCGA
ACCTCGCTCGGTGGCCCCCGTATAGCCGGAGGCTCCC
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protein sequence of NO05G02880.1

>NO05G02880.1-protein ID=NO05G02880.1-protein|Name=NO05G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=386bp
MKSPHSSVTPPVPRAQLTPHRQADDKREMGLDVKEKALLSFVAKVTLPLV
AVLGPIVAYTGIWEHPLWVLGLMTAGVYTAKLLSYVAERLTRGRKDMVGS
YGKWAIVTGATSGIGEAFAHELAGRGMNVLIISRTPAKLEKTREEVLRRA
PEGVEVEVLAYDFTRMAEADAFYARLSEVAVALHKKGGIGMLVNNVGTNV
EIPEFLHELPESEILNIVRVNVEGTVRMTRAILPFMAERHMGAIVNVSSG
SGNHPTPLLSTYAATKAFINEFSRSLHHEAKHVGVDVLLITPYYVSTPGM
YNKPPGLLNCSAQRLVQDTLAVLGRYDMAYPYIAHAVLGTLMDKYWATPA
ALFKSMNKTRMRSLSKKQGQKQGTSSAQGKIKAAA*
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Synonyms
Publications