NO05G02830, NO05G02830 (gene) Nannochloropsis oceanica

Overview
NameNO05G02830
Unique NameNO05G02830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1788
Alignment locationchr5:740821..742608 +

Link to JBrowse

Properties
Property NameValue
DescriptionC2h2 zinc finger protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:740821..742608 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR019446DUF2431
IPR013087Znf_C2H2/integrase_DNA-bd
Homology
BLAST of NO05G02830 vs. NCBI_GenBank
Match: POM81368.1 (Hypothetical protein PHPALM_674 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 141.4 bits (355), Expect = 8.000e-30
Identity = 124/392 (31.63%), Postives = 173/392 (44.13%), Query Frame = 0
Query:    9 LSTAALKVLVLGDGNLSYSLGLAERL---TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAG-DGTTTGPLSKDAPITGVIK-SVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGD 395
            L + + ++L +GDGN SYSL LA++       Q+ ATSYD   E+  KY E     A+L+ LG    VLH VDA ++ ESL        GV++ KK                            FD VVFNHPH G E++ RH +LL+HF  S   VL      E  EG    +TLA  Q +RW+  E A   G  L    D         +  + KRHQ+GKSF         +  TL  ++                S   +++   D V  + A    PAA        P+S+       +     C  C++ F+  + LR H+   HE  G  S+   L CE C R+FK + A +QHQ AKH GK   +KPDW   +   +T+  + D
Sbjct:   35 LKSRSRRILTVGDGNFSYSLALAKQHGNDPSLQLTATSYDSYDELVAKYPECKRICAQLKDLG--ASVLHRVDATNICESL--------GVEQLKK----------------------------FDSVVFNHPHCGEENVRRHQSLLSHFYSSALEVLED---NEEDEGNGILLTLAEGQPERWQAVERALSAGLRLHRQVDDVDNDEVFGLVYERKRHQNGKSF---------HHVTLHGERKK------------QKSTLFIFRRQKDGVTGDEAKA--PAASLTPEEKAPVSRKRKAESELPLEFVCTQCDRSFKSAQGLRTHVHMVHELEGGASKKVLLPCEFCDRTFKKEDARKQHQLAKH-GKDPLIKPDWYEKQETVLTTVSEPD 361          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_009538325.1 (hypothetical protein PHYSODRAFT_532154 [Phytophthora sojae] >EGZ06428.1 hypothetical protein PHYSODRAFT_532154 [Phytophthora sojae])

HSP 1 Score: 138.7 bits (348), Expect = 5.200e-29
Identity = 129/458 (28.17%), Postives = 180/458 (39.30%), Query Frame = 0
Query:   38 QVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHV--TLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWK----HSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTK-PVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            Q+ ATSYD   E+  KY ES    A+L+ LG    VLH VDA +++ESL      A G   +K                             F  VVFNHPH G E++ RH +LL+HF  S   VL      E ++  ++ +  TLA  Q +RW+  + A   G +L    D         +  + KRHQ+GKSF         +  TL  ++              +S++ I  +       +AVE E A   +    +         + P+        C  CE+ F+  + LR H+   HE  G  S+   L CE C R+FK + A  QHQ AKH GK   +KPDW   + AA +      T+ P   +P                                  C +C            H   L+P       C  C R F EERAL+QH N C
Sbjct:   67 QLTATSYDSYDELVAKYPESKRICAQLKELG--ASVLHRVDATNIRESL-----VAAGATSDK-----------------------------FHSVVFNHPHCGEENVRRHQSLLSHFYASALEVLEKGEGDEVEQSEESGILLTLAEGQPERWQAVQRALSAGLKLHRQVDNVDSDAKFGLEYERKRHQNGKSF---------HQVTLHGERKKQ-----------ASTLFIFRRQKAGEKVEAVEAEVAPVSRKRKAE--------SELPL-----EFACTQCERSFKSAQGLRTHVHMVHELEGGASKKLLLPCEFCDRTFKKEDARRQHQLAKH-GKDPLIKPDWYEKQQAAASDAPSATTEAPATAEPQ--------------------------------TCSICQLSFATAQEFDAHWQKLQPRSAAKRKCATCSREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: CCI46506.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 131.7 bits (330), Expect = 6.300e-27
Identity = 127/492 (25.81%), Postives = 197/492 (40.04%), Query Frame = 0
Query:   10 STAALKVLVLGDGNLSYSLGLAERL----TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRH---ICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYD-----AVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETG-DDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEA-AAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            S   L+++ +GDGN S+SL   + L       +++A+              + +  A+L+ LG    VLH V+A+ ++ES++ A +                     ++     +   T +L   D ++F+HPH G E+  +H  LL+HF +SC+ +L P       E G+ HVTL  +Q ++WK+ E A+  G+ L++     D+YR      V    KRHQ+GKSF                       V      +   SI  +W  ++      ++E   A   K    +  T  P              +C  C K FR  +    H    H  G   S++  + C  CSR+FK + AL +H  AKH GK   + PDW   E  ++I S +KG  K                       D K              C +C     +      HL +L P E    VC  C   F++ RAL+QH N C
Sbjct:    4 SDQPLRIVTVGDGNFSFSLAYFKYLKLQHDSFRLIASXXXXXXXXXXXXXXASSICAKLKQLG--AIVLHRVNAISLKESIQDAIS---------------------SDGCYCDEVTKTGSLFPLDIIIFHHPHLGHENRKQHLRLLSHFFDSCREILRP-------ECGEIHVTLTLNQLEQWKVQERAKWAGFYLQYCGLFSDYYR------VQYDRKRHQNGKSFE---------------------NVLMFGQQIQQPSILCIWTAAHSDETSCSIEEFIAKYNKDEEKEKVTHLP------------KFQCKDCGKSFRTAQGNETHFHMVHVLGVSQSDSHRVECILCSRTFKSQDALNEHNVAKH-GKNPLVLPDWMYEEKHSSIQSQQKGAAK-----------------------DWK--------------CSICREDFPSREQLDRHLKELIPTEGQVQVCDLCHAEFKQVRALRQHENHC 388          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: OQR90105.1 (hypothetical protein ACHHYP_05810 [Achlya hypogyna])

HSP 1 Score: 128.6 bits (322), Expect = 5.300e-26
Identity = 128/491 (26.07%), Postives = 182/491 (37.07%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERLTGA---------QVLATSYDDSQEVFTKYTESHATVARLEALGP---RVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCH---ACEKRFRGPKDLRKHMIDAHETG--DDSEAEDLACEPC-SRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDG+LSYS  L +    A          + A++YD    +  KY +    +  LEA       V V H VDA  +                     F+++                      FD +VF+HPH+G ED+HRH  LL+HF  +  +VL P         G+ +VTLA DQ KRW++ + A  LG     +C   ++    P   Q KRHQS KSF         +   L  +K                            VE ++ +       +GT    +    P+        C       K+F   + L+ H+   HE G        D +C  C  R F+D  AL+QH  AKH GK   + PDW  V A                                 A++  Q             CPVC      P +   H A L+P     + C  C++TF E+RAL+QH N C
Sbjct:    4 RVLTVGDGDLSYSRALLDTENWADLDVEAVHVHLTASTYDSRASLEDKYGQVAGNIEALEAASQAHITVMVRHDVDATSL-------------------SRFKDE---------------------PFDRIVFHHPHSGVEDVHRHRRLLSHFFHAALSVLRP--------NGRIYVTLARDQPKRWEIIKRATVLGL----VC-CKQELWVEPPGYQRKRHQSDKSF---------HRILLHGEK----------------------------VEQQSTLFGFGRKSEGTVPVSVVLAPPLKEPEGGFACEDPSCVGKKFATQQGLKTHLRMVHELGLKKRKREADFSCSQCHGRVFQDAEALQQHVLAKH-GKDSRISPDWFGVPA------------------------------PTDAVETPQ------------QCPVCMEMFPTPSALEAHFATLQPVAVAKWTCETCEKTFEEQRALRQHQNFC 361          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_012200325.1 (hypothetical protein SPRG_20099 [Saprolegnia parasitica CBS 223.65] >KDO28995.1 hypothetical protein SPRG_20099 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 127.9 bits (320), Expect = 9.100e-26
Identity = 128/488 (26.23%), Postives = 192/488 (39.34%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGL--AERLTGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACE------KRFRGPKDLRKHMIDAHETG------DDSEAEDLACEPCS-RSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDG+LSYS  L   E      + A + D +   F                            L +++    A++  + +           L   DA ++AA +++       FD +VFNHPH+G ED+HRH  LL+HF  +   VL P        GG+  VTLA DQ KRW++ + A+ L      +C    +    P   Q KRHQS KSF         +   L  +K                            +E ++ +       DG  T PL+  +P+   +      AC+      KRF   + L+ H+   HE G           +D+ C  C+ R F+D  AL+QH  AKH GK   ++PDW     A  T+ EK        +PS                                 CP+C     +  + + HL+ L+P     + C  C++TF E+RAL+QH N C
Sbjct:    4 RVLTVGDGDLSYSRCLLDPENWRDLSIDAPTIDLTASTFD-------------------------SLLALEDKYAMARSNIEALSAGSAAVTATVLHDIDATNLAAFENDEADH---FDRIVFNHPHSGVEDVHRHRRLLSHFFHAALRVLRP--------GGKVFVTLARDQPKRWEILKRADALDL----VC-CKHELWTEPRGYQRKRHQSDKSF---------HRILLHGEK----------------------------LEQQSTIFGFGRRRDG--TAPLA-HSPVPSALPQSNGMACDDPACGGKRFATAQGLKTHLRMVHELGIKKRKRGKDADDDVCCAHCNGRQFQDAEALQQHMLAKH-GKDSRIRPDW--YGHAPPTTEEK-------EEPSAQ-------------------------------CPICMELFPSATALSAHLSTLQPVAAAKWTCTSCEKTFEEQRALRQHQNFC 369          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_008617103.1 (hypothetical protein SDRG_12800 [Saprolegnia diclina VS20] >EQC29551.1 hypothetical protein SDRG_12800 [Saprolegnia diclina VS20])

HSP 1 Score: 125.6 bits (314), Expect = 4.500e-25
Identity = 131/496 (26.41%), Postives = 191/496 (38.51%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAE---------RLTGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFR---LRG----LPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE------TGDDSEAEDLACEPCS-RSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDG+LSYS  L +              ++ A+++D    +  KY       + L+ALG     +      DV                             DA ++AA +++       FD +VFNHPH+G ED+HRH  LL+HF  +   VL P        GG+  VTLA DQ KRW++ + A+ L      +C    +    P   Q KRHQS KSF    L G      S  + F  +   ++    + +P  LPSS   +                              + D P  G           KRF   + L+ H+   HE          ++A+D  C  C+ R F+D  AL+QH  AKH GK   + PDW    A  +T     +TK  A                                     CP+C     +  +   HL+ L+P     + C  C++TF E+RAL+QH N C
Sbjct:    4 RVLTVGDGDLSYSRCLLDPENWRDLDVDTPTIELTASTFDSLSALEDKYA---MVRSNLDALGAGSAAVSATVLHDV-----------------------------DATNLAAFENDEASH---FDRIVFNHPHSGVEDVHRHRRLLSHFFHAALRVLRP--------GGKVFVTLARDQPKRWEILKRADALDL----VC-CKNELWTEPRGYQRKRHQSDKSFHRILLHGEKLEQQSTIFGFGRRRDGTTPVATTTTPTTLPSSDAGV------------------------------ACDDPACG----------GKRFATAQGLKTHLRMVHELCIKKRKRGKADADDFRCSHCNGREFQDAEALQQHLLAKH-GKDSRISPDWYG-HAPTLT-----ETKEAA------------------------------------QCPICMELFPSATALTAHLSTLQPVAVAKWTCSMCEKTFEEQRALRQHQNFC 368          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: CEM39019.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 123.6 bits (309), Expect = 1.700e-24
Identity = 139/519 (26.78%), Postives = 199/519 (38.34%), Query Frame = 0
Query:   17 LVLGDGNLSYSLGLAERLTGA-------------------QVLATSYDDSQEVFTKYTESHATVARL-EALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRL--------RGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDG-----TTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHET---GD---DSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANACWPFEEKMRG 497
            L+LG+GN S++L L+  L+                     ++ ATS+D   EV  KY E+H  + RL  A    V+VLHG++A  +                             DA+   AR          FD + +NHPH G ED   H  L+AHF  S    L P        GG   V+L   Q +RW++ + A+R    L  +  F     P     Q KR+++G+SF+           + SFTY F  +S     P+ S      PSSS + +     DA   + A T +    D       + G  +  +P         C  C+K FR  + LR H+   HE    GD         L C  C R+F D  A  QH  AKH+ +              A  +NE          PS   + +D  ++D+                 +  CP+C   V       +HL  L+P       C  C R F E RAL+QH N C   +E  +G
Sbjct:    8 LLLGEGNFSFALALSTLLSRKDECERTRALRYLGVARPPDRLYATSFDSFSEVHRKYPEAHGIIERLHRAQEVPVQVLHGINAWAI-----------------------------DAHFPGAR----------FDLIAWNHPHLGKEDFRLHRFLMAHFFYSAAEALTP--------GGLVCVSLVDGQAERWEVVQQAQRHHLMLECVDPFEDSDYPG---YQCKRNKTGQSFKNLHTKQHVGSEMRSFTYRFRHESAAQDRPQQS-KVAAAPSSSTNGM---PPDAPLDQEATTGRVPGDDKWGERVASNGQRALSSP--AAESDFICPHCKKEFRSLRGLRTHVRQVHELKKYGDGWRPHRPRILQCAACDRAFADLEARWQHAVAKHTYQ-------------GADEANE----------PSQSTRTLDAPSFDS-----------------YYPCPICGLAVPGEWGIHQHLESLKPIVGLVAECVLCHRQFIEYRALQQHRNFCKAKQEGNKG 430          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: OQR81664.1 (hypothetical protein THRCLA_11528 [Thraustotheca clavata])

HSP 1 Score: 118.6 bits (296), Expect = 5.500e-23
Identity = 130/495 (26.26%), Postives = 183/495 (36.97%), Query Frame = 0
Query:   14 LKVLVLGDGNLSYS-----------LGLAERLTGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAM--TIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-------TGDDSEAEDLACEPCS-RSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            ++VL LGDG+LSYS           LG+ +R    Q+ AT++D  + +  KY                  V + +DAL                      +F+++                    M FD +VFNHPHTG ED+HRH  LL+HF  +   VL P         G+ ++TLA DQ KRW++ + A  L      +C    +    P   Q KRHQ+ KSF         +   L  +K            L   S    +    D +E    +     P A    +T     D    G           K+F   + L+ HM   HE        G  SE  D  C  C+ R+F+DK AL QHQ +KH GK   + PDW      A T+ E     P                                       C VC     +  +  +H+A L+P     + C  C + F E+RAL+QH N C
Sbjct:    3 MRVLTLGDGDLSYSRCLLDKENWKDLGI-DRDIQVQLTATTFDSLESLVEKY----------------AMVNNNIDALQATXXXXXXXXXXXXXXXXXXQQFEQE-------------------EMHFDRIVFNHPHTGVEDVHRHRRLLSHFFYAALQVLKPQ--------GKIYITLARDQPKRWEILKRAVALDL----VC-CKHELWTEPNGYQRKRHQNDKSF---------HRVLLHGEK------------LEQQSTIFAFGRKSDGIESVQVIEQPSVPTAVKDNSTAFACTDPNCIG-----------KQFTTAQGLKTHMRMVHELDIKKRKRGATSETLDYRCTQCNGRAFQDKEALHQHQISKH-GKDSQISPDW-----YAATNQECTKVAPEQ-------------------------------------CKVCMELFPSAQALKDHIATLQPIASVKWTCTICGKAFEEQRALRQHQNFC 373          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: CCA18538.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 115.5 bits (288), Expect = 4.700e-22
Identity = 100/377 (26.53%), Postives = 153/377 (40.58%), Query Frame = 0
Query:   14 LKVLVLGDGNLSYSLGLAERL----TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETGDDSEA-EDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAA 386
            L++L +GDGN S+SL   + L         +A+SYD   E+  KY E+ +   +L+ LG    VLH V+A+ ++ S+R A +                      N      + +   ++  D ++F+HPH G E+  +H  LL+HF  S + +L         E G+ HVT    Q  +W + E A+  G  LR+ C  +  +    V    KRHQ+GKSF                       V         +S+  +W  + +         IK    +                    +C  C K FR  +  + H    H  G  S A E + C+ C RSFK + AL  HQ AKH G+   + PDW   E +
Sbjct:    8 LRILTVGDGNFSFSLAYYKHLKAQNASISFIASSYDSFHELVNKYPEASSICTKLQQLG--AIVLHRVNAITLEASIRNASS---------------------CNRWNYEKATNAGVVIPLDIIIFHHPHLGHENQRKHVRLLSHFFHSSREIL-------HAEHGEIHVTFTLTQLAQWNVQERAKWAGLSLRY-CGLFSDY--YMVQYDRKRHQNGKSFE---------------------NVLMFGQQRQQTSVLCIWSVANEQNSESIEEVIKRNQQEELMQQ------------SQFQCTECNKSFRTAQGRQTHFHMMHVLGVSSSASESVKCDLCDRSFKSQDALGGHQVAKH-GENPLVLPDWMHEETS 317          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_008861177.1 (hypothetical protein H310_00251 [Aphanomyces invadans] >ETW09766.1 hypothetical protein H310_00251 [Aphanomyces invadans])

HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19
Identity = 126/500 (25.20%), Postives = 179/500 (35.80%), Query Frame = 0
Query:   14 LKVLVLGDGNLSYSLGLAERLTGA----------QVLATSYDDSQEVFTKYTESHATVARL---EALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHAC-EKRFRGPKDLRKHMIDAHE-------TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANACWPFEE 493
            +++L +GDG+LSYS  L ++   A           + AT+YD    +  KY  + + +  L    A    V V H VDA  +                                      S +T A + FD +VF+HPHTG ED+HRH  LL+HF  +   VL P         G   VTLA DQ  RW++   A  +G      C     + P P     KRHQS KSF         +   L  +K       +   F     I+I+      A   +A    +PA   G      S             C  C  KRF   +  + HM   HE       +    E +            D  AL QH+ AKH GK   ++PDW               ++PV          ++    DA+                   C +C+Y   +     +H   L+P       C  C +TF + RAL+QH N C   E+
Sbjct:    9 VRILTVGDGDLSYSRSLLDKENWADLDVADTPSMDLTATTYDQLSSLLEKYAMAASNIENLTTANAAYITVHVKHNVDATSL-------------------------------------SSIATSAELHFDRIVFHHPHTGVEDVHRHRRLLSHFFHAALQVLKPQ--------GLIFVTLARDQPSRWEILSRATAVGL----TCAMQSVWTP-PKGYTRKRHQSDKSF---------HHVLLHGEKLQQESTLF--RFGRQGDIAIVPTGPAAAQLVDAH---RPALSLGNPAWEFS-------------CDLCGGKRFATLQGKKTHMRMVHELNLKRKRSSSTDEMKXXXXXXXXXXXXDNEALTQHRLAKH-GKDSTIRPDW-------------HRSQPV----------LETLVRDAK-----------------FTCAICNYSFASQVELDQHWTTLQPIHVEKVACSICSKTFEDLRALRQHQNFCGAAEK 390          
The following BLAST results are available for this feature:
BLAST of NO05G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
POM81368.18.000e-3031.63Hypothetical protein PHPALM_674 [Phytophthora palm... [more]
XP_009538325.15.200e-2928.17hypothetical protein PHYSODRAFT_532154 [Phytophtho... [more]
CCI46506.16.300e-2725.81unnamed protein product [Albugo candida][more]
OQR90105.15.300e-2626.07hypothetical protein ACHHYP_05810 [Achlya hypogyna... [more]
XP_012200325.19.100e-2626.23hypothetical protein SPRG_20099 [Saprolegnia paras... [more]
XP_008617103.14.500e-2526.41hypothetical protein SDRG_12800 [Saprolegnia dicli... [more]
CEM39019.11.700e-2426.78unnamed protein product [Vitrella brassicaformis C... [more]
OQR81664.15.500e-2326.26hypothetical protein THRCLA_11528 [Thraustotheca c... [more]
CCA18538.14.700e-2226.53conserved hypothetical protein [Albugo laibachii N... [more]
XP_008861177.11.300e-1925.20hypothetical protein H310_00251 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003618NSK003618Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02830.1NO05G02830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629353gene_3088Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g175gene2419Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02830.1NO05G02830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02830 ID=NO05G02830|Name=NO05G02830|organism=Nannochloropsis oceanica|type=gene|length=1788bp
ACAGGTGCCATGAAGAGGAAGCACGATGAGATTCTGAGCACCGCCGCGCT
CAAGGTGTTGGTGCTTGGGGATGGTAACCTGTCGTACAGTCTCGGCTTGG
CCGAACGCCTGACGGGTGCGCAGGTGCTGGCGACCTCGTACGACGACTCG
CAGGAAGTATTCACGAAATATACTGAGAGCCACGCCACGGTGGCGCGTTT
GGAAGCGCTGGGTCCGCGTGTACGTGTGCTACATGGTGTGGACGCCTTGG
ATGTTCAGGAGAGCTTGAGACAGGCACAGGCACAGGCCCAGGGGGTCAAA
AAAGAGAAGAAGGGTGAATTTCAGGAGCAGTTGCAAGGAAGAGATGCAAA
TGACATAGCGGCCAGGGACTCGGAGAGCACCAAGGCATTGATGATCTTCG
ATCACGTGGTATTCAACCATCCGCACACCGGCTGGGAGGACATGCATCGA
CACACCGCTTTGTTGGCCCACTTCTTGGAAAGCTGCAAAGCCGTCTTGGC
GCCGCCGTCTCTCACGGAAGGTCAGGAGGGGGGGCAAGCCCACGTGACGC
TGGCTGGAGACCAGTGCAAGCGCTGGAAACTTTTCGAGACGGCGGAACGC
TTGGGCTATGAGTTGCGGCACATCTGCGACTTCTATCGTCAATTTGGTCC
CAACCCAGTGCCCGCGCAAATCAAGCGACATCAAAGCGGGAAGTCTTTTC
GCCTGCGTGGGCTGCCGAGTTTCACTTATACTTTTACTTTGAAGAGTAAG
AAATCGTCTCATCCCGAGGTCTCCTATTCCCCCCACTTCCTCCCCTCTTC
CTCCATCTCCATCCTTTGGAAACATTCTTACGATGCCGTGGAGCACGAAG
CTGCCATGACGATCAAGCCAGCGGCGGGAGACGGGACCACGACAGGCCCT
CTCAGCAAGGACGCGCCCATCACCGGCGTCATCAAGTCTGTCAAGTGCCA
TGCGTGCGAGAAACGCTTTCGAGGTCCTAAGGACTTGCGCAAGCATATGA
TTGATGCCCATGAGACTGGTGATGATTCAGAGgtaagtcagcaaggacag
gcaaggagggttttgcggggcttctctcatactttgagagggccttgttc
cctagccgatatttctttgtttagcgtatttcttttacgtaaatctatat
caattactgatgtccacatccacaaatccaccaaactatgcaaccaaatc
cagGCGGAAGATCTGGCATGCGAGCCCTGTTCTCGCAGCTTTAAGGATAA
GACGGCCCTAGAGCAACATCAACGTGCCAAGCACTCTGGCAAATTTCAAA
ATCTCAAGCCTGACTGGTGCACGGTGGAAGCAGCAGCCATCACCAGTAAC
GAAAAGGGGGACACAAAGCCGGTGGCAGTCCAACCGTCCCTGCATTTTAA
GGGGGTGGACAGGACTACGTACGATGCGAGGGCTATTGATAAAAAACAGC
TGCAGCAACAGCAGCAGGAGCAGCGGAAATTTGTGCTCTGTCCGGTGTGC
GATTATTATGTGACTGCCCCAGGCAGCACTGCCGAGCACTTGGCTGATCT
CCGGCCGCCCGAGCGTCCCACATACGTCTGCCACGGGTGCGACCGCACTT
TCCGGGAGGAGCGGGCTCTGAAGCAGCACGCCAATGCATGCTGGCCGTTT
GAGGAGAAGATGAGAGGAGACACGGACAGTGAGGAAAAGGAAACAGTATA
AGGAAGAGGATAAACGAACTTAAATAAAAGAACCAAGAAAACATAGATCG
CACAGCAAGTGCGTATGGGCCGGGGGAGGTCACAATTG
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protein sequence of NO05G02830.1

>NO05G02830.1-protein ID=NO05G02830.1-protein|Name=NO05G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=507bp
MKRKHDEILSTAALKVLVLGDGNLSYSLGLAERLTGAQVLATSYDDSQEV
FTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEK
KGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTA
LLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGY
ELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSS
HPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSK
DAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETGDDSEAEDLACEPC
SRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAV
QPSLHFKGVDRTTYDARAIDKKQLQQQQQEQRKFVLCPVCDYYVTAPGST
AEHLADLRPPERPTYVCHGCDRTFREERALKQHANACWPFEEKMRGDTDS
EEKETV*
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Synonyms
Publications