NO05G02730, NO05G02730 (gene) Nannochloropsis oceanica

Overview
NameNO05G02730
Unique NameNO05G02730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1328
Alignment locationchr5:719707..721034 +

Link to JBrowse

Properties
Property NameValue
DescriptionNad-dependent epimerase dehydratase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:719707..721034 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR029903RmlD-like-bd
Homology
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: EWM28140.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 311.2 bits (796), Expect = 4.200e-81
Identity = 168/283 (59.36%), Postives = 205/283 (72.44%), Query Frame = 0 
Query:   16 LLPLLLLFLC-------PAAIAFSMSSLPSTSSLFVFGLGYVGSRLAQKL--APAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTLLDAAALAALRQATHVLVTIPPVDGTDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLGNK 290
            + PLLL  LC        A  A  +S   STS LFVFGLGYVG+RLA+++  +P W V GTV SLS +    P VR +EFDA P+ P LLD   L  LR+ATHVL++IPP+DG D VV LY S L   C  LRW+GYLSSTSVYGDR G  V+E+DEVRPVTSK +ARV AE AWMEL + +P +    R+FRLAGIYGP RNAL T+R+G+ GAQ G  +  LDGD +VSRIHVEDI+R+L+CSM++    G +VEIYNVAD++PASRLEVFSFAA LLG++
Sbjct:    1 MTPLLLFLLCITPASGFGAPRAPLISGQESTSRLFVFGLGYVGARLAREMDESPGWAVAGTVISLSLASSIPPSVRVFEFDACPAAPKLLDPQGLCFLRRATHVLISIPPMDGYDPVVDLYRSELLKNCACLRWLGYLSSTSVYGDRQGAWVTEDDEVRPVTSKALARVRAEQAWMELRQCMPDRPLLCRVFRLAGIYGPDRNALTTLRKGMSGAQGGGSLPRLDGDSFVSRIHVEDIIRILRCSMDETVETGTEVEIYNVADNRPASRLEVFSFAARLLGDE 283
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: EFJ11935.1 (hypothetical protein SELMODRAFT_46084, partial [Selaginella moellendorffii])

HSP 1 Score: 165.2 bits (417), Expect = 3.700e-37
Identity = 108/254 (42.52%), Postives = 139/254 (54.72%), Query Frame = 0 
Query:   38 STSSLFVFGLGYVGSRLAQKL-APAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTL-LDAAALAALRQATHVLVTIPPVDG--TDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            +  S+FVFGLGY G  L ++L    W V GT  S             +  DA    P + LD   L AL QATH++  +PP     TDMV+K++   +  +C  LRW+GY+SST VYGD  G  V E  + +PV  K  ARV AE +W+EL     S    ++IFR  GIYGPGR+ L+T    LQGA+      +    R+ SRIHV D+ +VL  SME  S   G+  IYNV DD PA R EV +F   LLG
Sbjct:    2 TNQSMFVFGLGYTGVELGKQLRTKGWLVSGTCRSAEKRRTLE---ECYGVDAYIFGPGVSLDNGGLEALYQATHLVSCVPPDPDTLTDMVLKMHLEDIEARCRALRWIGYISSTGVYGDHRGGWVDESTQAKPVDRKSKARVAAENSWLELQHSNAS----VQIFRAGGIYGPGRSVLDT----LQGARQRRVSEARHSRRFTSRIHVSDVCQVLMASME--SPHSGR--IYNVVDDDPAPRSEVAAFGMELLG 240
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: XP_024516622.1 (uncharacterized protein LOC9662821 isoform X3 [Selaginella moellendorffii])

HSP 1 Score: 165.2 bits (417), Expect = 3.700e-37
Identity = 111/274 (40.51%), Postives = 149/274 (54.38%), Query Frame = 0 
Query:   21 LLFLCPAAIAFSMSSLPSTS---SLFVFGLGYVGSRLAQKL-APAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTL-LDAAALAALRQATHVLVTIPPVDG--TDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            +++ C   +  + + +  TS   S+FVFGLGY G  L ++L    W+V GT  S             +  DA    P + LD   L AL QATH++  +PP     TDMV+K++   +  +C  LRW+GY+SST VYGD  G  V E  + +PV  K  ARV AE +W+EL     S    ++IFR  GIYGPGR+ L+T    LQGA+      +    R+ SRIHV D+ +VL  SME  S   G+  IYNV DD PA R EV +F   LLG
Sbjct:    4 IVWSCSGGLLKTKNEVLETSTNQSMFVFGLGYTGVELGKQLRTKGWKVSGTCRSAEKRRTLE---ECYGVDAYIFGPGVSLDNGGLEALYQATHLVSCVPPDPDTLTDMVLKMHLEDIEARCRALRWIGYISSTGVYGDHRGGWVDESTQAKPVDRKSKARVAAENSWLELQHSNAS----VQIFRAGGIYGPGRSVLDT----LQGARQRRVSEARHSRRFTSRIHVSDVCQVLMASME--SPHSGR--IYNVVDDDPAPRSEVAAFGMELLG 262
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: XP_005651429.1 (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >EIE26885.1 NAD(P)-binding protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 163.3 bits (412), Expect = 1.400e-36
Identity = 112/275 (40.73%), Postives = 147/275 (53.45%), Query Frame = 0 
Query:   38 STSSLFVFGLGYVGSRLAQ-KLAPAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTLLDAAALAALRQATHVLVTIPPVDGT-DMVVKLYGSHLSNQCPRL----RWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMEL--VRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLGNKGAANLIANPPGFSPS 305
            ++  LFVFGLGY G  LA+  L   W+V GT  +L  S           F   P+    L   A+  L  +TH+L +IPP DGT D V+ + GS L + C  +    +WVGYLSST VYGD  GD V E  E+R    KG AR+ AEAAW ++    +VP     + IFRL GIYGPGR+AL+ + Q  Q  QA  +        + +R HV DI + L  SME   R G    +YN+ DD PASR EV ++A  LL  + A   + + P  S S
Sbjct:   41 ASPKLFVFGLGYTGKGLAKLSLGKGWDVAGTCRTLEGSRRLLQYEGIQAFPFDPNAGASLSPQAIDTLHCSTHILSSIPPADGTADPVLAMVGSELQS-CASVTGLAQWVGYLSSTGVYGDWQGDWVDETSELRATQGKGYARILAEAAWRQMWEEHKVP-----VHIFRLGGIYGPGRSALDAVAQ--QPGQASRNQRRRAQKCFTARSHVYDICQALMASME-CPRPGA---VYNIVDDDPASRAEVMAYAEQLLTGRPAPAAVLSTPEASSS 303
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: XP_002985479.2 (uncharacterized protein LOC9653048 isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 160.6 bits (405), Expect = 9.100e-36
Identity = 109/274 (39.78%), Postives = 147/274 (53.65%), Query Frame = 0 
Query:   21 LLFLCPAAIAFSMSSLPSTS---SLFVFGLGYVGSRLAQKL-APAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTL-LDAAALAALRQATHVLVTIPPVDG--TDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            +++ C   +  + + +  TS   S+FVFGLGY G  L ++L    W V GT  S             +  DA    P + LD   L AL QATH++  +PP     TD V+K++   +  +C  LRW+GY+SST VYGD  G  V E  + +PV  K  ARV AE +W+EL     S    ++IFR  GIYGPGR+ L+T    LQGA+      +    R+ SR+HV D+ +VL  SME  S   G+  IYNV DD PA R EV +F   LLG
Sbjct:    4 IVWSCSGGLLKTKNEVLETSTNQSMFVFGLGYTGVELGKQLRTRGWTVSGTCRSAEKRRTLE---ECYGVDAYIFGPGVSLDNGGLEALYQATHLVSCVPPDPDTLTDTVLKMHLEDIEARCRALRWIGYISSTGVYGDHRGGWVDESTQAKPVDRKSKARVAAENSWLELQHSNAS----VQIFRAGGIYGPGRSVLDT----LQGARQLRVSEARHSRRFTSRVHVSDVCQVLMASME--SPHSGR--IYNVVDDDPAPRSEVAAFGMELLG 262
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: XP_024516619.1 (uncharacterized protein LOC9662821 isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 160.6 bits (405), Expect = 9.100e-36
Identity = 111/277 (40.07%), Postives = 150/277 (54.15%), Query Frame = 0 
Query:   21 LLFLCPAAIAFSMSSLPSTS---SLFVFGLGYVGSRLAQKL-APAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTL-LDAAALAALRQATHVLVTIPPVDG--TDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEED---EVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            +++ C   +  + + +  TS   S+FVFGLGY G  L ++L    W+V GT  S             +  DA    P + LD   L AL QATH++  +PP     TDMV+K++   +  +C  LRW+GY+SST VYGD  G  V E +   + +PV  K  ARV AE +W+EL     S    ++IFR  GIYGPGR+ L+T    LQGA+      +    R+ SRIHV D+ +VL  SME  S   G+  IYNV DD PA R EV +F   LLG
Sbjct:    4 IVWSCSGGLLKTKNEVLETSTNQSMFVFGLGYTGVELGKQLRTKGWKVSGTCRSAEKRRTLE---ECYGVDAYIFGPGVSLDNGGLEALYQATHLVSCVPPDPDTLTDMVLKMHLEDIEARCRALRWIGYISSTGVYGDHRGGWVDESNCSTQAKPVDRKSKARVAAENSWLELQHSNAS----VQIFRAGGIYGPGRSVLDT----LQGARQRRVSEARHSRRFTSRIHVSDVCQVLMASME--SPHSGR--IYNVVDDDPAPRSEVAAFGMELLG 265
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: EFJ13353.1 (hypothetical protein SELMODRAFT_234809 [Selaginella moellendorffii])

HSP 1 Score: 160.2 bits (404), Expect = 1.200e-35
Identity = 105/250 (42.00%), Postives = 136/250 (54.40%), Query Frame = 0 
Query:   42 LFVFGLGYVGSRLAQKL-APAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTL-LDAAALAALRQATHVLVTIPPVDG--TDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            +FVFGLGY G  L ++L    W V GT  S             +  DA    P + LD   L AL QATH++  +PP     TD V+K++   +  +C  LRW+GY+SST VYGD  G  V E  + +PV  K  ARV AE +W+EL     S    ++IFR  GIYGPGR+ L+T    LQGA+      +    R+ SR+HV D+ +VL  SME  S   G+  IYNV DD PA R EV +F   LLG
Sbjct:    1 MFVFGLGYTGVELGKQLRTRGWTVSGTCRSAEKRRTLE---ECYGVDAYIFGPGVSLDNGGLEALYQATHLVSCVPPDPDTLTDTVLKMHLEDIEARCRALRWIGYISSTGVYGDHRGGWVDESTQAKPVDRKSKARVAAENSWLELQHSNAS----VQIFRAGGIYGPGRSVLDT----LQGARQLRVSEARHSRRFTSRVHVSDVCQVLMASME--SPHSGR--IYNVVDDDPAPRSEVAAFGMELLG 235
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: WP_107721137.1 (SDR family NAD(P)-dependent oxidoreductase [Celeribacter baekdonensis] >AVW92458.1 NAD(P)-dependent oxidoreductase [Celeribacter baekdonensis])

HSP 1 Score: 159.8 bits (403), Expect = 1.600e-35
Identity = 102/248 (41.13%), Postives = 129/248 (52.02%), Query Frame = 0 
Query:   42 LFVFGLGYVGSRLAQKLAP-AWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTLL-DAAALAALRQATHVLVTIPPVDGTDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            LF FG GY    LA++L P  W + GT  S +         +  EFD+    P +L     L  L QATH+L++  P    D ++  Y   L    P L WVGYLS+T VYGD GGD V+EE  + P T +G+ARVEAEAAW    R +   LS   IFRLAGIYGPGR     +R G       P        +  SRIHVEDI +V++ ++      G    IYNV DD P    +V  +AA LLG
Sbjct:    6 LFSFGHGYSAQALARRLLPQGWAITGTTRSAN---------KAQEFDSAGVAPLVLGQDPILPRLSQATHLLISAAPGPDGDPMLHHYREALVEAAPHLTWVGYLSTTGVYGDHGGDWVTEETALTPATKRGIARVEAEAAWQSFTRDLGLNLS---IFRLAGIYGPGRGPFAKVRSGKARRIIKP-------GQIFSRIHVEDIAQVVEAAIHRPELSG----IYNVCDDLPVPPQDVIGYAAELLG 230
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: WP_074643982.1 (SDR family NAD(P)-dependent oxidoreductase [Celeribacter baekdonensis] >SDF44148.1 Nucleoside-diphosphate-sugar epimerase [Celeribacter baekdonensis])

HSP 1 Score: 158.7 bits (400), Expect = 3.500e-35
Identity = 101/248 (40.73%), Postives = 127/248 (51.21%), Query Frame = 0 
Query:   42 LFVFGLGYVGSRLAQKLAP-AWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTLL-DAAALAALRQATHVLVTIPPVDGTDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            LF FG GY    LA++L P  W + GT  S           +  EFD+    P +L     L  L QATH+L++  P    D +++ Y   L    P L WVGYLS+T VYGD  GD V+EE    P T +G+ARVEAEAAW    R +   LS   IFRLAGIYGPGR     +R G       P        +  SRIHVEDI +V++ ++      G    IYNV DD P    +V  +AA LLG
Sbjct:    6 LFSFGHGYSAQALARRLLPRGWAITGTTRSAD---------KAQEFDSAGVTPLVLGQDPILPQLSQATHLLISAAPGPDGDPMLQHYRDELVKAAPHLTWVGYLSTTGVYGDHAGDWVTEETAFAPATKRGIARVEAEAAWQSFARDLGLNLS---IFRLAGIYGPGRGPFAKVRSGKARRIIKP-------GQIFSRIHVEDIAQVVEAAIHRPELSG----IYNVCDDLPVPPQDVIGYAAELLG 230
[Close]
BLAST of NO05G02730 vs. NCBI_GenBank
Match: WP_096806108.1 (SDR family NAD(P)-dependent oxidoreductase [Celeribacter ethanolicus] >ATG48302.1 NAD(P)-dependent oxidoreductase [Celeribacter ethanolicus])

HSP 1 Score: 158.3 bits (399), Expect = 4.500e-35
Identity = 102/252 (40.48%), Postives = 132/252 (52.38%), Query Frame = 0 
Query:   38 STSSLFVFGLGYVGSRLAQKLAP-AWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTLLDAAAL-AALRQATHVLVTIPPVDGTDMVVKLYGSHLSNQCPRLRWVGYLSSTSVYGDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRLAGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQCSMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLG 288
            +T  LF FG GY    LA++L P  WE+ GT          +P+ +  EFD     P LL    + A L  ATH+L++  P    D  ++ Y   L N  P L+W+GYLS+T VYGD GG  V EE  + P T +G+ARV+AE  W E  + +   LS   IFRLAGIYGPGR     +R G            +  D+  SRIHVEDI +VL+ S+      G    IYN+ DD P    EV  +AA LLG
Sbjct:    2 TTQKLFSFGHGYSAQALARRLLPQGWEIIGTTR--------NPE-KAREFDNAGVEPILLGQEPIPAQLGGATHLLISAGPNAEGDPFLRDYRQPLINAAPNLQWIGYLSTTGVYGDHGGGWVDEETPLTPATKRGIARVQAEMDWQETAQDLALNLS---IFRLAGIYGPGRGPFAKVRNGTAR-------RIVKKDQIFSRIHVEDIAQVLEASIHRPDSSG----IYNICDDLPVPPQEVIGYAAELLG 230
The following BLAST results are available for this feature:
BLAST of NO05G02730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28140.14.200e-8159.36nad-dependent epimerase dehydratase [Nannochlorops... [more]
EFJ11935.13.700e-3742.52hypothetical protein SELMODRAFT_46084, partial [Se... [more]
XP_024516622.13.700e-3740.51uncharacterized protein LOC9662821 isoform X3 [Sel... [more]
XP_005651429.11.400e-3640.73NAD(P)-binding protein [Coccomyxa subellipsoidea C... [more]
XP_002985479.29.100e-3639.78uncharacterized protein LOC9653048 isoform X1 [Sel... [more]
XP_024516619.19.100e-3640.07uncharacterized protein LOC9662821 isoform X1 [Sel... [more]
EFJ13353.11.200e-3542.00hypothetical protein SELMODRAFT_234809 [Selaginell... [more]
WP_107721137.11.600e-3541.13SDR family NAD(P)-dependent oxidoreductase [Celeri... [more]
WP_074643982.13.500e-3540.73SDR family NAD(P)-dependent oxidoreductase [Celeri... [more]
WP_096806108.14.500e-3540.48SDR family NAD(P)-dependent oxidoreductase [Celeri... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003607NSK003607Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02730.1NO05G02730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584470gene_3076Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g45gene2428Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02730.1NO05G02730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02730 ID=NO05G02730|Name=NO05G02730|organism=Nannochloropsis oceanica|type=gene|length=1328bp
GAGAGACTCTTTGAATCGTTACGTCAGCAACTTTCCCATCTTGAAAGCAA
GCACTCATTAACATAACCACAAGCACATTCTACAAGAGGGATGCATGAAA
CAAGGACGTCAACGCTTGCCTGACCTGACAGCCACTATGCTTCTTCCCCT
TCTGCTCCTCTTCCTGTGCCCTGCGGCTATTGCGTTCAGCATGTCCTCGC
TTCCTTCAACCTCCTCCCTCTTCGTGTTTGGCCTGGGGTACGTGGGAAGC
CGCTTGGCGCAGAAACTGGCACCAGCGTGGGAGGTTGGCGGCACTGTGTC
GTCTTTGTCTTCCTCGCTACCCTTTTCCCCCCAGGTACGTGAGTGGGAAT
TCGATGCCAGGCCGTCAAATCCCACGCTCCTGGACGCTGCGGCGCTGGCG
GCGTTGCGACAAGCCACGCACGTCCTAGTGACCATCCCACCTGTAGACGG
CACGGACATGGTGGTGAAACTGTATGGCTCCCATCTATCAAACCAATGCC
CCCGTTTGCGCTGGGTTGGGTACTTAAGCTCCACGAGTGTCTATGGCGAT
CGAGGTGGTGACTTGGTATCAGAGGAGGATGAAGTGCGGCCCGTTACGTC
CAAGGGTGTGGCGCGTGTGGAGGCCGAGGCAGCGTGGATGGAGCTGGTTC
GGCAGGTACCAAGCCAGCTCTCACATTTACGTATTTTCCGGTTAGCTGGT
ATCTATGGCCCGGGAAGGAACGCTTTGGAGACGATGAGGCAGGGGTTGCA
GGGGGCGCAAGCAGGGCCAGATATCTCAAGTCTTGATGGCGACCGGTGGG
TGAGCCGCATTCATGTCGAGGATATAGTTCGAGTGCTCCAGTGTTCTATG
GAAGACGACAGCCGGGATGGTGGCCAAGTGGAGATCTATAACGTGGCTGA
CGACCAGCCTGCCTCTCGCCTGGAGGTTTTTTCCTTCGCGGCTGCTTTGC
TGGGCAATAAAGGAGCTGCCAATCTGATTGCTAACCCACCAGGATTCTCC
CCGTCCGTAACCCCTCCCTCCTCCCGTCGTGCCCGGCCTCCAGAGAGCAA
GCGGGTGGCTAACAACAAAATAAAGGAGCTTCTACTAGGTGGCAGCGCGG
CATCCTCTTCCTCGACGTCGCCTTTACGATACCCCACATATGAGGAGGGA
TTGAGGCACATATGCGAGGAAATGGACGTGTGGAGATACTAAGCTGCCTA
TTGTCAACATTAGGCTGGGACACCAAAATAGTGTGTACAATGGAATGAAT
TGAGGGTCTTCCACCTCCGGGCATAAGAAACGGTGCTAAGCATCATTTCT
TTCCCTGAATCAAATTTTTCCCTTTTCT
back to top

protein sequence of NO05G02730.1

>NO05G02730.1-protein ID=NO05G02730.1-protein|Name=NO05G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MKQGRQRLPDLTATMLLPLLLLFLCPAAIAFSMSSLPSTSSLFVFGLGYV
GSRLAQKLAPAWEVGGTVSSLSSSLPFSPQVREWEFDARPSNPTLLDAAA
LAALRQATHVLVTIPPVDGTDMVVKLYGSHLSNQCPRLRWVGYLSSTSVY
GDRGGDLVSEEDEVRPVTSKGVARVEAEAAWMELVRQVPSQLSHLRIFRL
AGIYGPGRNALETMRQGLQGAQAGPDISSLDGDRWVSRIHVEDIVRVLQC
SMEDDSRDGGQVEIYNVADDQPASRLEVFSFAAALLGNKGAANLIANPPG
FSPSVTPPSSRRARPPESKRVANNKIKELLLGGSAASSSSTSPLRYPTYE
EGLRHICEEMDVWRY*
back to top
Synonyms
Publications