NO05G02710, NO05G02710 (gene) Nannochloropsis oceanica

Overview
NameNO05G02710
Unique NameNO05G02710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1642
Alignment locationchr5:716470..718111 +

Link to JBrowse

Properties
Property NameValue
DescriptionDNA-(apurinic or apyrimidinic site) lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:716470..718111 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR004808AP_endonuc_1
IPR005135Endo/exonuclease/phosphatase
Homology
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_014156313.1 (hypothetical protein SARC_05307 [Sphaeroforma arctica JP610] >KNC82411.1 hypothetical protein SARC_05307 [Sphaeroforma arctica JP610])

HSP 1 Score: 178.7 bits (452), Expect = 4.000e-41
Identity = 140/430 (32.56%), Postives = 204/430 (47.44%), Query Frame = 0 
Query:   62 AAKMKAAEVVL--QTKRCALARNP-----ALGHPCSFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQ----ESKCSGFSKILPGYVAYWSCSKVKKGYSGVAAFVK--------EVYVRGNGDGGGDAKMGP----IGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTG-WKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGG------------------------------RGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            A K KAA+  L  Q +R    R P       G   +F  ++WNV GL        A L   +     + LV +E   D L +QE KLQ    E   +     +PGY ++W  S  KKGYSGVA F+K        +  V   GDG   A   P     GKQ +L   F  G KK      E    +ETS     +  T  ++ +  +  +NV       +   +EGRV+T+E+  F++VG YV NSG  L RL++R+  +N     ++  L  TKPV++ GD NVA  D D YN  AKH+ K  G TP+ER A +  L  G   DTFR +HP+A+G ++YW+++ N R  N+G+RLD+  +AS+ L                                 +G ++ D++I  E     SDH P+G+ + ++
Sbjct:  116 AKKAKAADARLAKQAERPMFERTPMTRKYKAGSEQAFVAVAWNVAGL-------RAVLRTPQRIESFRRLVDVE-KPDYLLIQEHKLQGKDVEEIETALEPYIPGYESHWVSSTGKKGYSGVAVFLKYPVRNTPSDKQVADAGDGKNCANAKPNKEKKGKQASLKDMF--GIKK----DVEQELVSETS-----STKTMKNSDSQMYRAINVTMPKI--EGASDEGRVITVEYPHFYMVGAYVPNSGQNLARLEYRIGGWNKSLNAYMKELEKTKPVILGGDLNVAHTDQDVYNPEAKHIPKSAGTTPQERRAFSELLSDGEMVDTFRHYHPDARGAFSYWSMRVNNRVVNRGMRLDY-FVASKILVDNTAKSSETTDQSTDATEKPALASKNATPYKTQGAQILDAWISPE--YNGSDHCPVGIAIAID 521
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: KGN59519.1 (hypothetical protein Csa_3G824160 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 8.800e-41
Identity = 124/350 (35.43%), Postives = 165/350 (47.14%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSK-ILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D DVL LQETKLQE      +K ++ GY   YW+CS  K GYSG A                                                                     S  + ++V+YG  G  + D EGRVV +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L  +KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  NKG RLD+ +++ +  E     KVHDS+IL +  VG SDH PIG+VL++
Sbjct:  242 SVKILSWNVNGLRALLKGSSAV-----------ELAERE-DFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIKPISVRYG-LGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNR--KSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERVAE-----KVHDSYILPD--VGGSDHCPIGLVLKL 501
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_011652215.1 (PREDICTED: apurinic endonuclease-redox protein [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 8.800e-41
Identity = 124/350 (35.43%), Postives = 165/350 (47.14%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSK-ILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D DVL LQETKLQE      +K ++ GY   YW+CS  K GYSG A                                                                     S  + ++V+YG  G  + D EGRVV +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L  +KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  NKG RLD+ +++ +  E     KVHDS+IL +  VG SDH PIG+VL++
Sbjct:  208 SVKILSWNVNGLRALLKGSSAV-----------ELAERE-DFDVLCLQETKLQEKDILNITKSLVDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIKPISVRYG-LGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNR--KSAGFTNEERQSFETNFLQKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERVAE-----KVHDSYILPD--VGGSDHCPIGLVLKL 467
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: EJK74832.1 (hypothetical protein THAOC_03468, partial [Thalassiosira oceanica])

HSP 1 Score: 176.0 bits (445), Expect = 2.600e-40
Identity = 125/358 (34.92%), Postives = 175/358 (48.88%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFL------QETKLQESKC---SGFSKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGL-NDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            +F V+SWNV GL   +          K  + L+ L    G  DV+ L      Q+  L + K      F + +  +   WS S  KKGYSG A F+++   +G              KQ T+ SF              G K       D   +       T   E + V+  + G K  D EGR+   EF  F+LV  YV NSG +L+RL++R + ++  F   +  L +D KPV+ +GD NVA  + D +N GAKHL K  G TPEER +    LG G+ D FR  HPE +G Y+YW+ +   R  NKGLRLD+ I + +  E G  V+V DS++L +  +  SDH PI  VLE+E
Sbjct:  286 TFTVVSWNVAGLRAFV---------KKQPDALKTLAEQYG-ADVICLQASFVAQDIHLDDPKLKLRDHFKEKIGDFEGSWSYSTKKKGYSGTAMFIRKWGKKGK-------------KQSTMDSFM-------------GQK------ADDDKSKIPPEVPTELLEPIKVETEF-GSKAHDGEGRICIAEFPLFYLVNTYVPNSGQKLDRLKYRTEEWDTDFLHKMRSLEDDGKPVIWLGDLNVAFNEKDTWNEGAKHLPKSAGTTPEERASFDRQLGAGFVDAFRHLHPEGRGHYSYWSQRAGNRGPNKGLRLDYFICSQELFEDGSKVRVRDSYMLPD--MEGSDHCPI--VLEIE 596
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_008443352.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 3.400e-40
Identity = 123/350 (35.14%), Postives = 164/350 (46.86%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSK-ILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D D+L LQETKLQE      +K ++ GY   YW+CS  K GYSG A                                                                     S  + ++V+YG  G  + D EGRVV +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L   KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  NKG RLD+ +++ +  E     KVHDS+IL +  VG SDH PIG+VL++
Sbjct:  256 SVKILSWNVNGLRALLKGSSAV-----------ELAERE-DFDILCLQETKLQEKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIKPISVRYG-LGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSDRMAE-----KVHDSYILPD--VGGSDHCPIGLVLKL 515
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_008443353.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 3.400e-40
Identity = 123/350 (35.14%), Postives = 164/350 (46.86%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSK-ILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D D+L LQETKLQE      +K ++ GY   YW+CS  K GYSG A                                                                     S  + ++V+YG  G  + D EGRVV +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L   KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  NKG RLD+ +++ +  E     KVHDS+IL +  VG SDH PIG+VL++
Sbjct:  255 SVKILSWNVNGLRALLKGSSAV-----------ELAERE-DFDILCLQETKLQEKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIKPISVRYG-LGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSDRMAE-----KVHDSYILPD--VGGSDHCPIGLVLKL 514
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_022949944.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949952.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949960.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949968.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 172.2 bits (435), Expect = 3.700e-39
Identity = 120/350 (34.29%), Postives = 162/350 (46.29%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF-SKILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D D+L LQETKLQE       + ++ GY   YW+CS  K GYSG A                                                                     S  E ++V+YG  G  + D EGR+V +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L   KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  N+G RLD+ +++    E     KVH+S+IL +  VG SDH PIG+VL++
Sbjct:  204 SVKILSWNVNGLRALLKGFSAV-----------ELAERE-DFDILCLQETKLQEKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIEPISVRYG-VGISEHDSEGRLVMVEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTDEERQSFETSYLEKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNRGWRLDYFLVSGTIAE-----KVHESYILPD--VGGSDHCPIGLVLKL 463
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_022949935.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 172.2 bits (435), Expect = 3.700e-39
Identity = 120/350 (34.29%), Postives = 162/350 (46.29%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF-SKILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D D+L LQETKLQE       + ++ GY   YW+CS  K GYSG A                                                                     S  E ++V+YG  G  + D EGR+V +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L   KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  N+G RLD+ +++    E     KVH+S+IL +  VG SDH PIG+VL++
Sbjct:  241 SVKILSWNVNGLRALLKGFSAV-----------ELAERE-DFDILCLQETKLQEKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIEPISVRYG-VGISEHDSEGRLVMVEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTDEERQSFETSYLEKGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNRGWRLDYFLVSGTIAE-----KVHESYILPD--VGGSDHCPIGLVLKL 500
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_022973325.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita maxima] >XP_022973327.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 172.2 bits (435), Expect = 3.700e-39
Identity = 120/350 (34.29%), Postives = 162/350 (46.29%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF-SKILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D D+L LQETKLQE       + ++ GY   YW+CS  K GYSG A                                                                     S  E ++V+YG  G  + D EGR+V +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L   KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  N+G RLD+ +++    E     KVH+S+IL +  VG SDH PIG+VL++
Sbjct:  241 SVKILSWNVNGLRALLKGFSAV-----------ELAERE-DFDILCLQETKLQEKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIEPISVRYG-VGISEHDSEGRLVMVEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTDEERQSFETSYLEKGFVDTFRRKHPDVVG-YTYWGYRHGGRKTNRGWRLDYFLVSGTIAE-----KVHESYILPD--VGGSDHCPIGLVLKL 500
[Close]
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_022973328.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita maxima] >XP_022973329.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita maxima] >XP_022973330.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita maxima] >XP_022973331.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 172.2 bits (435), Expect = 3.700e-39
Identity = 120/350 (34.29%), Postives = 162/350 (46.29%), Query Frame = 0 
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF-SKILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHAT-WLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            S K+LSWNVNGL  +L G  A            EL   E D D+L LQETKLQE       + ++ GY   YW+CS  K GYSG A                                                                     S  E ++V+YG  G  + D EGR+V +EF  F+L+ VYV NSG  L+RL +R+  ++P    ++  L   KPV++ GD N A  +ID YN       K  G T EER++  T +L  G+ DTFR  HP+  G YTYW  +   R  N+G RLD+ +++    E     KVH+S+IL +  VG SDH PIG+VL++
Sbjct:  204 SVKILSWNVNGLRALLKGFSAV-----------ELAERE-DFDILCLQETKLQEKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAII-------------------------------------------------------------------SRIEPISVRYG-VGISEHDSEGRLVMVEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTDEERQSFETSYLEKGFVDTFRRKHPDVVG-YTYWGYRHGGRKTNRGWRLDYFLVSGTIAE-----KVHESYILPD--VGGSDHCPIGLVLKL 463
The following BLAST results are available for this feature:
BLAST of NO05G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_014156313.14.000e-4132.56hypothetical protein SARC_05307 [Sphaeroforma arct... [more]
KGN59519.18.800e-4135.43hypothetical protein Csa_3G824160 [Cucumis sativus... [more]
XP_011652215.18.800e-4135.43PREDICTED: apurinic endonuclease-redox protein [Cu... [more]
EJK74832.12.600e-4034.92hypothetical protein THAOC_03468, partial [Thalass... [more]
XP_008443352.13.400e-4035.14PREDICTED: DNA-(apurinic or apyrimidinic site) lya... [more]
XP_008443353.13.400e-4035.14PREDICTED: DNA-(apurinic or apyrimidinic site) lya... [more]
XP_022949944.13.700e-3934.29DNA-(apurinic or apyrimidinic site) lyase, chlorop... [more]
XP_022949935.13.700e-3934.29DNA-(apurinic or apyrimidinic site) lyase, chlorop... [more]
XP_022973325.13.700e-3934.29DNA-(apurinic or apyrimidinic site) lyase, chlorop... [more]
XP_022973328.13.700e-3934.29DNA-(apurinic or apyrimidinic site) lyase, chlorop... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003604NSK003604Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02710.1NO05G02710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584455gene_3074Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g43gene2430Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02710.1NO05G02710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02710 ID=NO05G02710|Name=NO05G02710|organism=Nannochloropsis oceanica|type=gene|length=1642bp
GCTGCATTCGATTTCTTTCTCACAATACGAAAGCATAACCGACACAACCG
TAGAAGTCATGCCAAAGCGCAAGCAGGAGGAGGAAAGGGAGACGAATGGA
CAGGAGCAGGAGCAGGAGGGCAACGAGCTGTCTGAAGAGAAGGAAGGGGT
GTTGATGAAGAAGCAGGAGGGGAATCGGGAGGAGGAGCAGCAGCAGCTCG
AGGAGAGTGACGCTGACCAGCACGAGCGGCCGCAGAAGAAGGCGGCGAAG
ATGAAGGCTGCAGAGGTCGTGTTACAGACGAAACGTTGTGCCTTGGCCCG
GAATCCAGCTCTCGGCCACCCGTGCTCTTTTAAGGTTCTTTCTTGGAATG
TGAACGGCCTTAATGGCATCCTGAATGGAAAGCATGCCACGCTCAACGGC
AACAAGACTACCAACGTGTTGCAAGAACTGGTAGCCCTTGAAGGAGATGT
GGATGTGTTGTTCCTCCAAGAGACTAAGCTGCAAGAGAGCAAATGTTCTG
GCTTTAGCAAAATTCTTCCCGGATACGTGGCATATTGGTCCTGTTCAAAA
GTCAAGAAGGGGTATTCGGGGGTGGCTGCGTTTGTAAAGGAGGTGTATGT
GCGCGGAAATGGTGATGGCGGTGGGGATGCAAAAATGGGACCGATAGGGA
AGCAACGGACACTGTCAAGCTTTTTTCGGGCCGGCTTCAAGAAGAAGGGA
ACCGCGACGGAAGAGGGGGCCAAGGGCGCTGAGACATCCCCGTGTGATGC
TGCTACCGCTGATACTGCTTCTTCCACTTCGACTTCCTCGTTCGAAGTCT
TGAATGTGAAGTACGGCTATTGCGGAGACAAAGACGAGGACGAGGAAGGT
CGTGTGGTGACCCTGGAATTTGCATGCTTTTGGTTGGTGGGGGTGTACGT
AGCGAATAGTGGGATGAGGCTTGAGCGGCTGCAGCATCGCCTCAAGACTT
TCAATCCACGTTTTCAAGAGTTTCTTTCCGGCCTGAATGACACTAAGCCT
GTATTAGTCATTGGAGATTTTAATGTGGCCCCGTTGGATATAGATTGCTA
CAATGCAGGGGCTAAGCATTTGGTGAAGGTGCCAGGGTTGACACCGGAGG
AGCGGGAGGCGCATGCTACGTGGTTAGGTACCGGATGGAAGGATACATTC
AGgttcgttttcagatttctacgaaaaaaaaaaatcttgacttccttttc
tcttcgcctcacctatcaattttacattctcgtcttcatgtatctcatca
tttacatccgccgttttttcagGGCCTTTCATCCGGAAGCCAAGGGGCAG
TACACCTACTGGAACGTCAAGACAAATGCAAGGCCTGACAACAAGGGACT
GCGACTAGACTTTGCCATAATTGCTTCGCAAGACCTGGAAGGAGGAAGAG
GAGTCAAGGTGCATGACTCGTTCATTCTGCACGAAGCGACGGTGGGCTAT
TCGGATCATGCGCCCATTGGCGTTGTCCTGGAGGTGGAGGGGGGAGGGAG
GGAAGAGATGTCTTCGTGACGAAGAGATGAACAAATTGTTCAATAAACGT
GCCAAAATGGTCATATCTGGCACGATAAACGAACAAAGGTCACGAAGAGT
AACAATCAACCGCACGAATGAATGTCACTCTTAACATTGCAG
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protein sequence of NO05G02710.1

>NO05G02710.1-protein ID=NO05G02710.1-protein|Name=NO05G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MPKRKQEEERETNGQEQEQEGNELSEEKEGVLMKKQEGNREEEQQQLEES
DADQHERPQKKAAKMKAAEVVLQTKRCALARNPALGHPCSFKVLSWNVNG
LNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFS
KILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQR
TLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNV
KYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNP
RFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEERE
AHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIAS
QDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVEGGGREEMSS*
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Synonyms
Publications