NO05G02710, NO05G02710 (gene) Nannochloropsis oceanica

Overview
NameNO05G02710
Unique NameNO05G02710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1642
Alignment locationchr5:716470..718111 +

Link to JBrowse

Properties
Property NameValue
DescriptionDNA-(apurinic or apyrimidinic site) lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:716470..718111 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR004808AP_endonuc_1
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of NO05G02710 vs. NCBI_GenBank
Match: EWM28136.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 461.5 bits (1186), Expect = 3.100e-126
Identity = 238/390 (61.03%), Postives = 291/390 (74.62%), Query Frame = 0
Query:   62 AAKMKAAEVVLQTKRCALARNPALGHPCSFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPI-GKQRTLSSFFRAGFKKKGTATEEGAKG----AETSPCDAATADTASS----------TSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEV 437
            ++  +  E+VLQT+R  LARN       SFKVLSWNVNGLNGILNGK A +NGNK +NVLQ+LV  EG+VDV+FLQETKLQ++KC+ F  +LPGYVA+WSCSK KKGY+GVAAFV E YV+       DA  G   GKQ TL+SFF    K K T   +GA+G     +T+ C +A+  ++ S          +S  + +VL+V+ G  G+ DEDEEGRV+TLEF  FW+VGVYV NSGM+LERL++RLK +NP FQ +L+ LN  KP LV+GD NVAP   D YNAGAKHL KVPGLTPEEREAHA WL TGWKDTFRA HP+A+G YTYWNVKT AR +NKGLRLD A+I + D++GGRGV+V DSFILHEAT+G+SDHAPIGVVL++
Sbjct:   65 SSSKQVTELVLQTERDLLARNSL--PEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPT--KGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: CBJ48391.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 223.8 bits (569), Expect = 1.100e-54
Identity = 150/417 (35.97%), Postives = 203/417 (48.68%), Query Frame = 0
Query:   69 EVVLQTKRCALARNPALGHPCSFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF--SKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGG----------DAKMGPIGKQRTLSSFF----------RAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLN-DTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTG-WKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLE---------------------------GGRGVKVHDSFILHEATVGYSDHAPIGVVL 435
            E+ + TKR  + R P      +F VLSWNVNG+              K    L+ +V  E   D++ LQETK+QE          ILPGY + WSCS+ K GYSG A F  +      GDGGG          D       KQ  +S+FF                                     AD+      S F+VL+V++G  GD   + EGR +T+E+  F++V VYV NSG +L RL +R K ++   + ++  L    KPV++ GD NVA LD+D YN GAKHL K    T EER++  +W+  G   D FR  HP+A+G YTYW+V+T ARP N+GLRLD+ + ++   E                           G +G+ VHD F+L EATVG SDH PIG+ L
Sbjct:   54 ELPIFTKRDPIDRVPFPSTGTTFTVLSWNVNGVRA---------TAKKGLEPLRRMVEKEMP-DIVCLQETKIQEKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDATGNGLPSDEPARKKLKQGKISTFFSPKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSLPG-GRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITL 459          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_001745290.1 (hypothetical protein, partial [Monosiga brevicollis MX1] >EDQ89868.1 predicted protein, partial [Monosiga brevicollis MX1])

HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52
Identity = 130/342 (38.01%), Postives = 172/342 (50.29%), Query Frame = 0
Query:   93 VLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVL 435
            V+SWNVNGL  +L               L +LV  E + D+LFLQETKLQ S  + ++ +LPGY   WSCS+ KKGYSG                                                                TA +T TS F  L+V+YG       D+EGR +T+E    +++GVYV NSG  L+RL +RL  +N  F  ++  L  +KPVLV+GD NVA LD+D YNAG  HLVK  G TP+ER A   +L  G+ DTFR  +PE  G +TYW+ +T  R D+KGLRLD+A+ ++  LE    ++  DS       V  SDH PI +VL
Sbjct:    3 VVSWNVNGLRAVLKNH---------PKALPDLVQAE-NPDLLFLQETKLQASHVADYANLLPGYTGLWSCSRAKKGYSG----------------------------------------------------------------TAGATPTSDFRALSVQYG-IKSAHHDQEGRTITVELPDLFVIGVYVPNSGQDLKRLDYRLNEWNVDFLAYIRELEASKPVLVVGDLNVAHLDLDIYNAG--HLVKSAGCTPQERTAFTEFLDQGFTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLEANSPLRCLDS-------VMGSDHCPIAIVL 260          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: GAX10437.1 (AP endonuclease 1 [Fistulifera solaris])

HSP 1 Score: 187.2 bits (474), Expect = 1.100e-43
Identity = 132/353 (37.39%), Postives = 181/353 (51.27%), Query Frame = 0
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSKILP-----GYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            +FK+ +WNV GL G+L          K    L+ L   + D+DVL LQETKLQES  +     L      GY A++SCSK +KGYSG A FVK              +     +Q TL SFF+    +K        KG E++    A  D +  + T   E+L       G +  D+EGR+V L+F  F LV VYV NSG +LERL +R + ++  F +F+    +    L  GD NVA  +++ +N GAKHL    G+T +ER +    L TG+ D FR  HP A G YTYW+ +   R  NKGLRLD+ I     LE    + V DS++  E     SDH P  V +E++
Sbjct:  117 TFKIATWNVAGLRGLL---------TKDPEALKNL-CQKHDLDVLCLQETKLQESHVTDLKLNLTQHHPIGYDAHYSCSKARKGYSGTAVFVK--------------RQAVTKQQTTLDSFFQPKTSEK--------KGKESTKYVPANFDRSLLSPT---EIL----FDMGIEKHDQEGRMVVLKFPHFTLVNVYVPNSGQKLERLLYRTEEWDVDFLKFMQSQPN---ALWCGDLNVAHTNLEVWNDGAKHLATQAGVTEQERASFTHQLETGFIDVFRHLHPTAAGHYTYWSQRAGNREPNKGLRLDYFICHPSLLEESSNIIVRDSYMDPEQM--GSDHCPAIVEMEIK 425          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: PRW45261.1 (apurinic endonuclease-redox [Chlorella sorokiniana])

HSP 1 Score: 187.2 bits (474), Expect = 1.100e-43
Identity = 138/361 (38.23%), Postives = 173/361 (47.92%), Query Frame = 0
Query:   83 PALGHPCSFKVLSWNVNGLNGILNGKHATLNGNKTTNV--LQELVALEGDVDVLFLQETKLQESKCSGF--SKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWL--GTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            P  G   + ++LSWNV GL  +L        G    NV  L  LV  E   DVL LQE KLQ   C G      LPG+   W+CSK KKGYSG A   K+                                                SP                   L+V  G  GD D D EGRVVT EF  F+LV  YV NSG  L+RL +R++ ++  F  +L GL   KPV++ GD NVAP DID +N   K  +K  G TPEER + A  L  G G  DTFRA HPEA G YTYW+ + NAR +N+G RLD  ++ SQ L      +VHD ++L    V  SDH P+G+VL+++
Sbjct:    5 PLAGDAKACRILSWNVAGLRALLKKVKEAQEGRLEQNVPSLPALVEAE-KADVLCLQEIKLQADHCEGVLAELGLPGWHVTWNCSKDKKGYSGTAILSKD------------------------------------------------SP-------------------LSVSCG-IGDPDHDGEGRVVTAEFDQFFLVNTYVPNSGEGLKRLDYRVQQWDKEFAAYLQGLQQRKPVVLTGDLNVAPTDIDIHN--PKGNLKSAGFTPEERASFADNLLAGCGLVDTFRAQHPEAVG-YTYWSYRFNARANNRGWRLDHFLV-SQALH----ERVHDCYLL--PGVMGSDHCPLGLVLKMD 286          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: GAX16694.1 (AP endonuclease 1 [Fistulifera solaris])

HSP 1 Score: 186.0 bits (471), Expect = 2.500e-43
Identity = 131/353 (37.11%), Postives = 181/353 (51.27%), Query Frame = 0
Query:   90 SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSKILP-----GYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            +FK+ +WNV GL G+L          K    L+ L   + D+DVL LQETKLQES  +     L      GY  ++SCSK +KGYSG A FVK              +     +Q TL SFF+    +K        K  E++    A  D +  + T   EVL       G +  D+EGR+V L+F  F LV VYV NSG +LERL +R + ++  F +F+   ++   V+  GD NVA  +++ +N GAKHL    G+T +ER +    L TG+ D FR  HP A G YTYW+ +   R  NKGLRLD+ I     LE    + V DS++  E     SDH P  V +E++
Sbjct:   92 TFKIATWNVAGLRGLL---------TKDPEALKHL-CQKHDLDVLCLQETKLQESHVTDLKLNLTQHHPIGYDVHYSCSKARKGYSGTAVFVK--------------RQTTTKQQTTLDSFFQPKTSEK--------KEKESTKHVPANFDRSLLSPT---EVL----FDMGIEKHDQEGRMVVLKFPLFTLVNVYVPNSGQKLERLSYRTEEWDVDFLKFMQSQSN---VMWCGDLNVAHTNLEVWNDGAKHLATQAGVTEQERASFTQQLETGFIDVFRHLHPTAAGHYTYWSQRAGNREPNKGLRLDYFICHPSLLEESSNIIVRDSYMDPEQM--GSDHCPAIVEIEIK 400          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_022838498.1 (Exodeoxyribonuclease III xth [Ostreococcus tauri] >CEF97122.1 Exodeoxyribonuclease III xth [Ostreococcus tauri])

HSP 1 Score: 184.9 bits (468), Expect = 5.500e-43
Identity = 130/385 (33.77%), Postives = 185/385 (48.05%), Query Frame = 0
Query:   66 KAAEVVLQTKRCALARNPALGHPC------SFKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF----SKILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWL-GTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEG-GRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            K  E   + ++  +ARN A G         +FK +SWNV GL   +    A L            +  E   DV+ LQE KLQ S    F     ++ PGY    ++ S  KKGYSG+ A  +E                                +K G  T E   G  + P   A +D         F+ ++   G  G     +EGR +T+E+  F++V  YV NSG  L+RL +R+K +    +  L  L+  KPV+ IGD NVA LD D +N  A H+ K  G TP+ER A    L   G  D+FR FH +A G ++YW+V+   RP NKGLRLD+A+ + +  +G   GV+V D+FIL + T   SDHAP+G+ L ++
Sbjct:   20 KTKEPAKRFEQTEIARNVAPGAKTTRDGRETFKAISWNVAGLRSFVEKSGAKLRA----------LVEEERPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVAVSRE-------------------------------GRKGGQVTIEAMLGGASKP---AVSD--------GFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAIK 350          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: OUS43864.1 (ARP protein, partial [Ostreococcus tauri])

HSP 1 Score: 183.7 bits (465), Expect = 1.200e-42
Identity = 128/372 (34.41%), Postives = 180/372 (48.39%), Query Frame = 0
Query:   79 LARNPALGHPCS------FKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGF----SKILPGY-VAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWL-GTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEG-GRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            +ARN A G   +      FK +SWNV GL   +    A L            +  E   DV+ LQE KLQ S    F     ++ PGY    ++ S  KKGYSG+ A  +E                                +K G  T E   G  + P   A +D         F+ ++   G  G     +EGR +T+E+  F++V  YV NSG  L+RL +R+K +    +  L  L+  KPV+ IGD NVA LD D +N  A H+ K  G TP+ER A    L   G  D+FR FH +A G ++YW+V+   RP NKGLRLD+A+ + +  +G   GV+V D+FIL + T   SDHAP+G+ L ++
Sbjct:  142 IARNVAPGAKTTRDGREIFKAISWNVAGLRSFVEKSGAKLRA----------LVEEERPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVAVSRE-------------------------------GRKGGQVTIEAMLGGASKP---AVSD--------GFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAIK 459          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: GBG28833.1 (DNA-apurinic or apyrimidinic site lyase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 183.3 bits (464), Expect = 1.600e-42
Identity = 116/341 (34.02%), Postives = 159/341 (46.63%), Query Frame = 0
Query:   91 FKVLSWNVNGLNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFSKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTK--PVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWL-GTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDF-----AIIASQDLEGGRGVKVHDSFILHEATVG 424
            FKVLSWNVNGL  +   + A L            +A E    ++ LQETK+QES    F K+LPGY ++WSCS VKKGY+G A FV + Y                                                                 E   V YG   DK E  EGR +T       LV +YV N+G  L+RL++R K ++   + +L  L      P +V GD NVA  D+D +N  AKH+ K  G TPEER +   +L    + D FR  H +AKG +TYW+++TN RP N+G RLD+      +  +   +    V++HD+++LHE TVG
Sbjct:  152 FKVLSWNVNGLRAMARKQPAML----------ATLAQEEKPQIVCLQETKIQESHVGDFEKLLPGYTSFWSCSTVKKGYAGTALFVADGY-----------------------------------------------------------------EKCEVSYGIGMDKHEG-EGRAITARLPFCNLVSLYVPNAGQDLKRLEYRTKEWDLDLRSYLRDLEAETGLPCIVCGDLNVAHRDLDVWNPDAKHVPKTAGSTPEERASFTEFLHEMEYVDAFRYLHGDAKGHFTYWSMRTNGRPFNRGNRLDYFCMPRRVAEAAATDADTPVRLHDTYVLHEPTVG 416          
BLAST of NO05G02710 vs. NCBI_GenBank
Match: XP_002181718.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46932.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 181.0 bits (458), Expect = 8.000e-42
Identity = 133/358 (37.15%), Postives = 181/358 (50.56%), Query Frame = 0
Query:   90 SFKVLSWNVNGLNGIL-NGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQES-------KCSGFSKILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQRTLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNVKYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNPRFQEFLSGLNDTK--PVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEEREAHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIASQDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVE 438
            + ++ SWNV GL  ++ N  HA          L + V  E +VDVL LQETKLQES       K  G      G+ +Y+SCS  +KGYSG + FVK    R    G   AK     KQ+TL S+F  G   +   +    KG E    D             SF+ +NV      DK  D EGR+V ++F  F +  VYV NSG +LERL +R + ++  F  F+      +  PVL +GD NVA  +++ +N GAKHL K  G+T EER +    L  G+ D FR  HP AKG Y+YW+ +   R  NKGLRLD+ I      +      V DS++L       SDH P+ + LE++
Sbjct:  166 TMRIASWNVAGLRALMRNSPHA----------LSDFVR-EHNVDVLCLQETKLQESHLDDPKLKIRGHLLEKEGFDSYYSCSTARKGYSGTSVFVKR---RQLIKGSKVAK-----KQKTLGSYF--GKNDERETSSNSLKGTEELSIDPHLL----VPEGVSFQ-MNV------DK-HDSEGRIVVVDFPSFTMCNVYVPNSGQKLERLSYRTEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHLAKQAGVTAEERASFEAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFICDPSLFDEESKTIVRDSYVL--PLQQGSDHCPVVLELEIK 488          
The following BLAST results are available for this feature:
BLAST of NO05G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28136.13.100e-12661.03Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
CBJ48391.11.100e-5435.97conserved unknown protein [Ectocarpus siliculosus][more]
XP_001745290.18.500e-5238.01hypothetical protein, partial [Monosiga brevicolli... [more]
GAX10437.11.100e-4337.39AP endonuclease 1 [Fistulifera solaris][more]
PRW45261.11.100e-4338.23apurinic endonuclease-redox [Chlorella sorokiniana... [more]
GAX16694.12.500e-4337.11AP endonuclease 1 [Fistulifera solaris][more]
XP_022838498.15.500e-4333.77Exodeoxyribonuclease III xth [Ostreococcus tauri] ... [more]
OUS43864.11.200e-4234.41ARP protein, partial [Ostreococcus tauri][more]
GBG28833.11.600e-4234.02DNA-apurinic or apyrimidinic site lyase [Aurantioc... [more]
XP_002181718.18.000e-4237.15predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003604NSK003604Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02710.1NO05G02710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584455gene_3074Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g43gene2430Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02710.1NO05G02710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02710 ID=NO05G02710|Name=NO05G02710|organism=Nannochloropsis oceanica|type=gene|length=1642bp
GCTGCATTCGATTTCTTTCTCACAATACGAAAGCATAACCGACACAACCG
TAGAAGTCATGCCAAAGCGCAAGCAGGAGGAGGAAAGGGAGACGAATGGA
CAGGAGCAGGAGCAGGAGGGCAACGAGCTGTCTGAAGAGAAGGAAGGGGT
GTTGATGAAGAAGCAGGAGGGGAATCGGGAGGAGGAGCAGCAGCAGCTCG
AGGAGAGTGACGCTGACCAGCACGAGCGGCCGCAGAAGAAGGCGGCGAAG
ATGAAGGCTGCAGAGGTCGTGTTACAGACGAAACGTTGTGCCTTGGCCCG
GAATCCAGCTCTCGGCCACCCGTGCTCTTTTAAGGTTCTTTCTTGGAATG
TGAACGGCCTTAATGGCATCCTGAATGGAAAGCATGCCACGCTCAACGGC
AACAAGACTACCAACGTGTTGCAAGAACTGGTAGCCCTTGAAGGAGATGT
GGATGTGTTGTTCCTCCAAGAGACTAAGCTGCAAGAGAGCAAATGTTCTG
GCTTTAGCAAAATTCTTCCCGGATACGTGGCATATTGGTCCTGTTCAAAA
GTCAAGAAGGGGTATTCGGGGGTGGCTGCGTTTGTAAAGGAGGTGTATGT
GCGCGGAAATGGTGATGGCGGTGGGGATGCAAAAATGGGACCGATAGGGA
AGCAACGGACACTGTCAAGCTTTTTTCGGGCCGGCTTCAAGAAGAAGGGA
ACCGCGACGGAAGAGGGGGCCAAGGGCGCTGAGACATCCCCGTGTGATGC
TGCTACCGCTGATACTGCTTCTTCCACTTCGACTTCCTCGTTCGAAGTCT
TGAATGTGAAGTACGGCTATTGCGGAGACAAAGACGAGGACGAGGAAGGT
CGTGTGGTGACCCTGGAATTTGCATGCTTTTGGTTGGTGGGGGTGTACGT
AGCGAATAGTGGGATGAGGCTTGAGCGGCTGCAGCATCGCCTCAAGACTT
TCAATCCACGTTTTCAAGAGTTTCTTTCCGGCCTGAATGACACTAAGCCT
GTATTAGTCATTGGAGATTTTAATGTGGCCCCGTTGGATATAGATTGCTA
CAATGCAGGGGCTAAGCATTTGGTGAAGGTGCCAGGGTTGACACCGGAGG
AGCGGGAGGCGCATGCTACGTGGTTAGGTACCGGATGGAAGGATACATTC
AGgttcgttttcagatttctacgaaaaaaaaaaatcttgacttccttttc
tcttcgcctcacctatcaattttacattctcgtcttcatgtatctcatca
tttacatccgccgttttttcagGGCCTTTCATCCGGAAGCCAAGGGGCAG
TACACCTACTGGAACGTCAAGACAAATGCAAGGCCTGACAACAAGGGACT
GCGACTAGACTTTGCCATAATTGCTTCGCAAGACCTGGAAGGAGGAAGAG
GAGTCAAGGTGCATGACTCGTTCATTCTGCACGAAGCGACGGTGGGCTAT
TCGGATCATGCGCCCATTGGCGTTGTCCTGGAGGTGGAGGGGGGAGGGAG
GGAAGAGATGTCTTCGTGACGAAGAGATGAACAAATTGTTCAATAAACGT
GCCAAAATGGTCATATCTGGCACGATAAACGAACAAAGGTCACGAAGAGT
AACAATCAACCGCACGAATGAATGTCACTCTTAACATTGCAG
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protein sequence of NO05G02710.1

>NO05G02710.1-protein ID=NO05G02710.1-protein|Name=NO05G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MPKRKQEEERETNGQEQEQEGNELSEEKEGVLMKKQEGNREEEQQQLEES
DADQHERPQKKAAKMKAAEVVLQTKRCALARNPALGHPCSFKVLSWNVNG
LNGILNGKHATLNGNKTTNVLQELVALEGDVDVLFLQETKLQESKCSGFS
KILPGYVAYWSCSKVKKGYSGVAAFVKEVYVRGNGDGGGDAKMGPIGKQR
TLSSFFRAGFKKKGTATEEGAKGAETSPCDAATADTASSTSTSSFEVLNV
KYGYCGDKDEDEEGRVVTLEFACFWLVGVYVANSGMRLERLQHRLKTFNP
RFQEFLSGLNDTKPVLVIGDFNVAPLDIDCYNAGAKHLVKVPGLTPEERE
AHATWLGTGWKDTFRAFHPEAKGQYTYWNVKTNARPDNKGLRLDFAIIAS
QDLEGGRGVKVHDSFILHEATVGYSDHAPIGVVLEVEGGGREEMSS*
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Synonyms
Publications