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Properties
| Property Name | Value |
|---|
| Description | ATPase, vacuolar ER assembly factor, Vma12 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr5 | genome | chr5:711538..716469 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR021013 | ATPase_Vma12 |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Homology
BLAST of NO05G02690 vs. NCBI_GenBank
Match: EWM28139.1 (ATPase, vacuolar ER assembly factor, Vma12 [Nannochloropsis gaditana]) HSP 1 Score: 277.3 bits (708), Expect = 4.700e-71 Identity = 150/254 (59.06%), Postives = 186/254 (73.23%), Query Frame = 0
Query: 8 DTLPLLLIRLPGLEAVALMQQACTLSS----TGDEALASYKGEKDVTPAQLRAAHAVLKEVFQEREDAFNETVIQGARPVFPRHVQRKEDLATQATAKEGWRKNLQAKHQKQEYDRMVKNVHWGGARKPDPETRPFYQASIAFNMLVAMITAGFMGWYVAGSFITKDAHRLMVGIVTAMTMLVLEMMLYIIRTTEVERYAPKRERNEQLGQQGKTIPCGYADDLTFRKPTAKKNTSNRSIVGPPNSGGVKQKVL 258
+ LPLL IRLPG +AV LM QA LS+ GDE L SY GE+DV+PAQLRAA+ V+K Q E+ F ETV++GAR V+PRH KE+LA + E WR+ L +HQ++EYDRMVKNV+WGG +KPDPETRP YQASIAFNML A TAGF+GWY AG+F++K RLMV I+ AM MLV+EM LYIIRT+E+ERYAPKRERN Q+GQ+G IP G+ DD+ F + ++ N + I +S GVKQKVL
Sbjct: 9 EPLPLLRIRLPGPQAVELMLQARKLSTEADGPGDEHLGSYGGEQDVSPAQLRAAYVVMKHQGQSHENNFIETVMRGARSVYPRHTLHKEELALRDKMSEEWRRKLHHRHQQREYDRMVKNVYWGGGKKPDPETRPVYQASIAFNMLAATFTAGFLGWYAAGAFLSKYEQRLMVAIIAAMFMLVVEMTLYIIRTSEIERYAPKRERNVQMGQKGLRIPTGFQDDIQFWRDSS-GNRKAKMI----SSEGVKQKVL 257
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02690 ID=NO05G02690|Name=NO05G02690|organism=Nannochloropsis oceanica|type=gene|length=4932bp
GTTCCGAGCCCTACTAACGCCACACTCCCCATCCCCATCCTTCTCTCTCC
ACATCTCCACCATCCCACAGCCACAATCATCTGAGACATGGCCCCGACCA
CCACCACCGACACTTTGCCCTTACTCCTAATTCGGTTGCCCGGACTCGAA
GCCGTGGCGCTTATGCAGCAAGCCTGCACACTCTCTTCTACCGGCGACGA
AGCATTGGCGTCTTACAAAGGCGAGAAAGACGTGACTCCAGCCCAGTTGC
GAGCGGCTCATGCGGTGCTGAAGGAGGTATTCCAGGAGCGGGAGGATGCC
TTTAATGAGACGGTCATACAAGGCGCCCGCCCTGTGTTTCCTCGGCACGT
GCAGCGGAAGGAGGACCTTGCGACTCAGGCCACGGCGAAGGAAGGCTGGC
GAAAGAATCTCCAAGCCAAACACCAGAAGCAAGAGTACGACCGCATGGTC
AAGAATGTGCACTGGGGCGGGGCACGAAAGCCAGACCCAGAAACCCGTCC
ATTCTACCAGGCCTCCATTGCATTCAACATGCTAGTGGCTATGATCACGG
CGGGCTTTATGGGTTGGTATGTGGCGGGCTCGTTTATAACTAAAGACGCA
CACCGTTTGATGGTGGGAATTGTAACGGCCATGACGATGCTTGTGTTGGA
AATGATGTTGTACATCATCCGAACGACAGAGGTAGAGCGGTATGCCCCCA
AGCGGGAACGGAACGAGCAGTTGGGCCAGCAAGGCAAGACCATTCCTTGC
GGCTACGCTGACGATCTCACGTTCAGAAAACCGACGGCCAAAAAGAACAC
CAGCAATAGATCTATCGTGGGCCCACCAAACTCGGGAGGAGTCAAACAAA
AGGTGTTATGAGCGCGgtaagagaaacagattgtaccatagaatccacag
tgagaaagggtgaggacagacacggcgaatccactcggagaaaaaagaca
ctcgaaaacgaagaccttttatagattgcatggagagcatcatttcgttt
aatcagcgatggaataaagcacagattttgtagaacaaaatcaaaggagc
agtgagttgcgctttttacaagttgtacaatacttttgtttccttcattt
tttacaggtgtctgtctacacaatgatcattccctcttatcaaaccccat
ctcctccttctcttccttatactctcacaccatacgaacagTCGGAATTC
GTTTCAAGCCCGGCGCCGAAACAACCAGAATATCGCGAGGCCCTACCCAC
CTGACATAGCTCTTTCTCCTACTCCTGGGAGAGACAGCAGCACGCACGTC
CACCGGCTCAAACGTTAGAACAGGACAGGCGAGCAAGCCCGCACGAACAG
GCACCAACTTGCATTCCACCACCACCCGAGCAAATGTCTGCTGCTGTTTG
TCGCTCCCTTCACCGGTAGCCGGCGACCGTGCTTCCACTGTACCCTTCGT
CATGCCCCACACGGCCCAGTCCGCCGGGTCAGCAGCAACCTCATAAACCA
ATCGAAATCGCTCCCGTTCCCTACCCTCCTGCTTCGCTATGGCGGCTGCC
GCAGTCGCTGCCACAGCTTCACGGGCTGCCTCTTCTGAGAGCTCCACGGC
CAACTCAAGGCGTAAAGCAACGCCGACGACTCCCTCTGTGACCCGATTTT
GGAAGTATCCTACCACCACCCCTCGATCTTCCACGTCCCCCGGAATGGCT
GGTGCACAGGCAGGCAGCAACAAATGCTGCTGGTTCTCTTTGTCCACAAC
CGTGACAGCAGCTGCAATGACATCATCTCCATAGTCTCGGGATGAAAGGA
AGGAGGAGGGAGGCAGGGTAGCGGGTACGAGCTGCGCACGCACAACAAAC
GTACGGAGGGTATCACCACGGCTGCGCATGGCTGAGTCTTGAAAATAGCG
TTCAAAGTTCTGTCGCTGCTGCGGAGGGTGGTGGCACCGGAAACGAGCTT
TATTGATAGGTCTCGGGCTCTCCAAAGTGTAGTCTGCGCTAACGGACATC
TTGCTGGGGGATTCGCGGAAGGCGGATGACGACGAGGCTGCTGCATTACT
TCCTACTGCTGCGGCAGAAACCATCCGTTCGATCAGATAAGCGTAACGCA
CCTCTTGTCCGGGGGCAAGGAGGAGATTGCGGAGGTGGGTCCCTTGCTTG
CCGCTTCTGCTGAAACTATCTCCGTCCTCGTCGTCCTGCACCACGATGTG
ATAGAAAGGAGAGGGGCGAAGGCGACACGCATGGAGTATTACAGGTAAGG
GGGCGCGGTTCCGGAGTAGGACTTGCACGAAGTACCGACGGGAGGAATGC
CAGTGTGAACAGTCTTGCACGGAGATGACGACAGTGAGAGGTTGTTGGAT
GACAATTTCGCACCCTGTTCGGAGGGTATTTCGACAAAGGGCTTCTTCGC
GGACGTCATGGCCCCACGTGCCCGTGGTAAGGGAGAGACTGCGGCGTCTT
TGATTTGGGACGACAGCGCGGGGGGTGTTGGAAGAGGAGGAGGAGATAGA
GAAGGAGCGTGGCGAAACGGCGTCTGAGGCAGTAGATGTGCAAGCTGCTG
GTGCTACTGCTAGTGCTCCTGCTGCTGCTGCTGTTATTACTTCTCGCTCA
GCGTCCACGGGGCGACGGAGAATATTGTCTTTGTTGAATTCCGCGGTGAG
CTGTACCTGTACCGAAACTAGGCGTTGATGGTCTTGCCGGCTTCGAACAA
AGGCGTCGACTACATCGGGTGACGGGTGCAAGGCGACAGTAAGAATTAGA
GAGGTGCTTGGGGGCAAGATGGGTGGAAGAACCAATGTTGCTGTCGCACC
ATTCCAGGCCACTTCCACTTCTTCTTCGTGGAGTGGTGCATCTTCTCCTA
GATCTTCGTTGTCCGTCTTTTTCTGTGGGTAGAAAGAAAGATAGGCTGGG
CCCTTTACTTCAAAAGCTTTGAGAGCAGGTTGGGTGAGGGTGAGCATGGG
GGATGTCAGCGTGTCAGAGTACGTGTCCAGAAGCACCGAGAGGTGATGCA
CATGTTCGCTATCCGGAGGGGAAACAGGCGAGGTTAGCACTGTTAGAGTC
GTAGCGGGAGGTTTGACGACTACAGTTAGACCCACCGCGCGCCGAACTGG
CGTTTTGTTGAGAGCAGAGAAGCGGCGCGGGGGTGGGCATTGCTTGATCG
CTGCATCTAAGGTGTCGGGGTCGAGGGCCGCGAGTCGATCTTGTTCCAGG
ATCAGGCTACCCCATCGGAGGATAAGCTTCTCGTAGACATATGTGCCGGG
TGGAGGGAGGGAGGTGGTGACGAGCTCTAGCTCATTTACACCCGGCTCGA
GGGTCAAGGGCCCTGCTAGAGTCCAGACTAGGTTATCTTCGGGCTGCTGC
CCCTCCTCTGTCGCTGAAGCAGCAGCTGCGCTTCCCGTCATGGTCATGTC
AGAGGGAAGGTTTGACGAAGAATACAGCAAAGACACATTGCTCACATTAC
TTGTGCTGTCGATACTCCCCAAAGAATTGCTAGTCGCCGCTAGGTCTATA
TTACGACGAGGGCTGGGGCTGCGCGGAGTTATCGCAGGAGGGGAAAGGAC
TAAACCCCCATCTATATCATTTCCGGTTGTGGCCGCGGCAGATGCGTTTG
CGGGCGAGCTCACTGCTATCCACCCATAATCAGCTCCGAGCCGTCGTTGA
TCCCGCAGTTGCGCCACCCCCCCCAAAGTCAATGTCAGGCCATCAACAGG
TAAGGGGTGTTGGAGAGCTAAATGCAGCCAGACGACTACCGAGGCTGTCT
TGCCCAGCTCCACTGATGGAGGAATAGAAACAAGGTCTCTTGGAGTAGTT
TTAATGCGGGCGGTAACCAGCAGACTTAAAGGGCGGGTCAAACGAGGACT
GCTGCTGCTGGTGCTGCTGCCTGGCATCCGTTGCCGGACGTACTCATCAA
GTTCCGATCTGTAGTAAGCTCCTGTCGCCTCATCTAAACACTGCAACGAC
AAAATCTGCAACAGCGTCCCGACATACGCCTTCGCATTCCCCCGCTCCTT
CTCACAGCGTGCCAAGTTTCGCAAGACTTGGGAGAGCAACGGCACCCAGA
AATCCCTTCTCAGATTATACTCCGCCACACGCCGCAACACTTTACGAGCT
TCCTCCCATTCCCCTTTTCGTAGCAAGATACTCGCCCGCTCCGCCTGGAC
ACGGCCCACGAACCGCTCTCGACCGCCGTCTTCCAGGTAGCGGACTAATA
CCTCGGTCATTCTCAAATATTGCTCGTCGAAAGCCACGACAGAGTCCAGC
GTCATCGGCAACCAGGGAGCGGCCCGGGCAAAAAGCGCGACTGGGGACAA
GGGTACGCGGCGAGGGTCATCCAAATCTACGGACTTCCCACCATCGTTGT
CGCTGCTGCTGCCACTGTTGGGGAAGAAGGAAGAGGAGGGGGAAGAGCGA
AGGTAGGCATCAATGTCGCTTAAAGAGGTCAGGACAGGAAGCGAGGAGGA
AGAGGAAGATGACGGAGAAGGGAAAGGACTTCGTCGACGTGGTGACGGTG
CAGAACCAAGACCGGCTGTGTACTTCGTCGATGCATTTCGCCTTGCAGCA
CAGACAATTGACTTTTCGTCAAATTTCTGTAGACCTAACAACGACAGACC
CAGATCCCAAAACCGCATTCGAATAAAATCTAGCAATTCTGCTAAATTCC
GCGCCATAAGTCCGGGCTCTAAAATAATCATTTTGGACACAGCATTGCAA
ACTCTACTGCTGCCATGGGGTCCTGCTGATAAGGCAGAAGAAGCACACAG
GGTGCTGCTCAGGGAGGGAGGATGTGCCCCCGCTGTCGTCTCCGGTTGGG
GGACCGCAACGGCTGGCAGCGGGAACGGAGAGAAGGAGGAAGAGGCCAAG
TTGGGAAGAGCGGATGGTTGCATTTGCTGCCGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTTGTTGTTGTTGTTGTTGTTGT back to topprotein sequence of NO05G02690.1 >NO05G02690.1-protein ID=NO05G02690.1-protein|Name=NO05G02690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp
MAPTTTTDTLPLLLIRLPGLEAVALMQQACTLSSTGDEALASYKGEKDVT
PAQLRAAHAVLKEVFQEREDAFNETVIQGARPVFPRHVQRKEDLATQATA
KEGWRKNLQAKHQKQEYDRMVKNVHWGGARKPDPETRPFYQASIAFNMLV
AMITAGFMGWYVAGSFITKDAHRLMVGIVTAMTMLVLEMMLYIIRTTEVE
RYAPKRERNEQLGQQGKTIPCGYADDLTFRKPTAKKNTSNRSIVGPPNSG
GVKQKVL* back to top
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