NO05G02600, NO05G02600 (gene) Nannochloropsis oceanica

Overview
NameNO05G02600
Unique NameNO05G02600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3795
Alignment locationchr5:688462..692256 +

Link to JBrowse

Properties
Property NameValue
DescriptionRNA binding protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:688462..692256 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
Homology
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: EWM28135.1 (RNA binding protein [Nannochloropsis gaditana])

HSP 1 Score: 294.7 bits (753), Expect = 6.900e-76
Identity = 186/333 (55.86%), Postives = 209/333 (62.76%), Query Frame = 0 
Query:  176 NARLLDTLLTDNYTNNPAVGVSDAGPYPPSAAMGFDATLAATTLSMGNLELRSEDIKIANAQTFLMAQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSSALFSQSAXXXXXXXXXXXXPILSQQQAFAQSVYTKYGPQCNGGYPSPLKTPGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSGMGGSIGGHGAPSSAFSASDTLSPHGSNPLMIGSGGAPAPLHALQRWQAHLASQAALQQ 509
            NA +L+ LL D Y  NP   +       PS+    DA+LA  TL MG L +R E+  + NA+ F+M                   XXXXXXXXXXXX                     GL ++LF+Q+A            P L QQQ  AQ+VY+KYG   NGGYPSPLKTPGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNN DSALQAI+AMNGFVVGHKRLKVEQKKDK+SL M G GGS+    AP+S+   S   S +   P      G   P HALQRWQ   +  A LQQ
Sbjct:  186 NAAILNNLLGDKYRQNPPGSLVSG----PSSTTDLDASLAVATLGMGGLGIRQEEAHMVNAEAFMM-------------------XXXXXXXXXXXXFMQTFHRPQGPPRVSVDGMGTGLPASLFNQNA-GLLAAQQVQPNPTLVQQQTLAQNVYSKYGIVTNGGYPSPLKTPGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNHDSALQAIKAMNGFVVGHKRLKVEQKKDKASLHMPGFGGSMAAPVAPASSPDLSHIQSMNALGP------GVSVPFHALQRWQPQFSGAAPLQQ 488
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: CCA25727.1 (CUGBP and ETR3like factor putative [Albugo laibachii Nc14])

HSP 1 Score: 149.8 bits (377), Expect = 2.800e-32
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:  340 GYPSPLKTPGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDK 444
            G+   +  PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+T+G VISARIMV+K TGRSRGFGFVSY+NP SA  AI+ MNGF VG KRLKV+ KK++
Sbjct:  128 GFAPQIAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATYGNVISARIMVEKETGRSRGFGFVSYDNPPSADAAIKGMNGFQVGRKRLKVQHKKER 231
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: XP_002903343.1 (CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4] >EEY55767.1 CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 149.8 bits (377), Expect = 2.800e-32
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSG 451
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+TFG VISARIMV+K TGRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+KS   M G
Sbjct:  133 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKSQGPMFG 235
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: XP_008605678.1 (hypothetical protein SDRG_01901 [Saprolegnia diclina VS20] >EQC40834.1 hypothetical protein SDRG_01901 [Saprolegnia diclina VS20])

HSP 1 Score: 149.1 bits (375), Expect = 4.700e-32
Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSGM--GGSIGG 458
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+TFG VISARIMV+K TGRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+K  +    M  GG++ G
Sbjct:  162 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGGMYEDDMDQGGAVAG 273
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: XP_024574275.1 (cug-bp-and etr-3-like [Plasmopara halstedii] >CEG37906.1 cug-bp-and etr-3-like [Plasmopara halstedii])

HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSG 451
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+TFG VISARIMV+K TGRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+K+   M G
Sbjct:  133 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKNQNPMFG 235
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: OQR91773.1 (CUG-BP- and ETR-3-like factor [Achlya hypogyna])

HSP 1 Score: 148.3 bits (373), Expect = 8.000e-32
Identity = 70/99 (70.71%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSL 447
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+TFG VISARIMV+K TGRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+K  +
Sbjct:  150 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGGM 248
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: CCI45842.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 147.9 bits (372), Expect = 1.000e-31
Identity = 73/111 (65.77%), Postives = 86/111 (77.48%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSGMGGSIGGH 459
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+T+G VISARIMV+K TGRSRGFGFVSY+NP SA  AI+ MNGF VG KRLKV+ KK++       M G + GH
Sbjct:  136 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATYGNVISARIMVEKETGRSRGFGFVSYDNPPSADAAIKGMNGFQVGRKRLKVQHKKERDP--NQAMYGDMCGH 244
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: XP_009821437.1 (hypothetical protein H257_00439 [Aphanomyces astaci] >ETV89037.1 hypothetical protein H257_00439 [Aphanomyces astaci])

HSP 1 Score: 147.5 bits (371), Expect = 1.400e-31
Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLG 448
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F TFG VISARIMV+K +GRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+K S G
Sbjct:  155 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFQTFGNVISARIMVEKESGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGSGG 254
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: XP_002903339.1 (CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4] >EEY55763.1 CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 147.5 bits (371), Expect = 1.400e-31
Identity = 78/119 (65.55%), Postives = 88/119 (73.95%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSG---MGGSIGGHGAPSS 464
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+TFG VISARIMV+K TGRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+KS   M G   M  S     A SS
Sbjct:  128 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKSQGQMFGEMPMDNSANDMAAQSS 246
[Close]
BLAST of NO05G02600 vs. NCBI_GenBank
Match: XP_012200994.1 (hypothetical protein SPRG_06214 [Saprolegnia parasitica CBS 223.65] >KDO28167.1 hypothetical protein SPRG_06214 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 146.7 bits (369), Expect = 2.300e-31
Identity = 73/111 (65.77%), Postives = 86/111 (77.48%), Query Frame = 0 
Query:  348 PGAPIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSGMG-GSIGG 458
            PG PI+TT+S +GP GCNLFVFHIPNDMTN DL+  F+TFG VISARIMV+K TGRSRGFGFVSY+N  SA  AI+ MNGF VG KRLKV+ KK+K  +    M  G++ G
Sbjct:  158 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGGMYEDDMDQGAVAG 268
The following BLAST results are available for this feature:
BLAST of NO05G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28135.16.900e-7655.86RNA binding protein [Nannochloropsis gaditana][more]
CCA25727.12.800e-3267.31CUGBP and ETR3like factor putative [Albugo laibach... [more]
XP_002903343.12.800e-3270.87CUG-BP- and ETR-3-like factor, putative [Phytophth... [more]
XP_008605678.14.700e-3266.07hypothetical protein SDRG_01901 [Saprolegnia dicli... [more]
XP_024574275.16.100e-3269.90cug-bp-and etr-3-like [Plasmopara halstedii] >CEG3... [more]
OQR91773.18.000e-3270.71CUG-BP- and ETR-3-like factor [Achlya hypogyna][more]
CCI45842.11.000e-3165.77unnamed protein product [Albugo candida][more]
XP_009821437.11.400e-3171.00hypothetical protein H257_00439 [Aphanomyces astac... [more]
XP_002903339.11.400e-3165.55CUG-BP- and ETR-3-like factor, putative [Phytophth... [more]
XP_012200994.12.300e-3165.77hypothetical protein SPRG_06214 [Saprolegnia paras... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003594NSK003594Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02600.1NO05G02600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G02600.2NO05G02600.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G02600.3NO05G02600.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584427gene_3062Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g33gene2439Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02600.1NO05G02600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G02600.2NO05G02600.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G02600.3NO05G02600.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02600 ID=NO05G02600|Name=NO05G02600|organism=Nannochloropsis oceanica|type=gene|length=3795bp
GGGGGGGGGGGGGGGGGAAAGGGTCTTTATGGTTGACCCTACAGTACCCG
TTTTAAAAGAGTATTTTCACGCAGCGTAAGTGACAAAATCTCTTTAATTG
TAGAGATCTGTGTCCATTTTAATTTAGTTGTGTTGTCCCCTCCTCCCTGC
TGGCAGTATATCGATCGCCGAAGATGAGAAGGGGGGGGGGAGAGACGAAC
AGTTTTCGTCTTTCATTCTTGCATTTCTACGGATGAATCATTTCTTGTTA
GTTCCCCTCCATGCATGCATGGAACCACTTCACATTGCACTGTGATGACT
GGTGACTTTGCGACCTGGAGTTAGAGCTTTCAGTCTGGCTGTGATCGTAA
TCTTCCCATACGCCGTAGTCTTCTTTGCTTGTTCCACATCACCTTCTGTT
TCCTTATCTGTTTGAAATCCTCTCCACCCATTTCAGGGCAACCCAAGGGA
CATTGCAGCCGACTCGGGAGCATCGAACACAATTTCGCAGTCGGTAGGTA
CCACACGGCGCCTTCTCTGCAAGGGCCACATTACAAATCCGAAAACGCTC
TCACCGGGGCTTGCGGGACAGTCTTCTTTCTGAGGAGCTGAGAAAGGTGG
AAAAGGGCTTTCTTCTGCACTAATTCTTGTTTTATCCCAGCAGTGCGACA
CTGAGCTTGGCGCCTACGACCATGGACACCGCCAGCACCACCACCATGCC
CGGTCCTACAGGGTCAACAGGTCCTGCTGGCGAGGGCGGCAACAATTTTA
ATGCCTTCGTCACGCCAACGGGGGGCGGACTCTTTGCCTACGAGCCTCCC
TTTCCCAAGGGTAGCCCCACCCCTTCTTCGTCCTCGTCGCCACCACCCAC
GAATCCAGGTCATGAGAATGTTCTTGGGGCCACAGGGAATGTATCTGGTG
GTTCGCGGCCTGATTCCTCATCCCCGTCCTTGGACGCGGCTGAGGATTCT
TCGTCGCCCGCCGCTGTCCCCCCCCAGGGTTCTCTCTCGTCGAGTCAGCA
CCAAAAGCAAGAGGATGATGGCATTTCACCCTCGGTGCCACCATCGGAAG
AGGCACAGCAGATGGCCGATAAGAGCAGTAAAGGAAAGCAGAACAGTCAC
ACCACTGCCAGCACCAGTGAAACATTGGATACCACGGCTGCGGCCGCTGC
TGCGGCCGCCGGTGAGAAGCAACATCAGGACCAGCCAGGAGAGCAGAACG
CCCGTCTTTTGGATACTTTACTGACCGACAACTACACCAATAACCCAGCG
GTGGGTGTCTCGGACGCGGGCCCTTACCCTCCTTCGGCTGCTATGGGATT
TGACGCGACTCTAGCAGCGACAACCTTGAGCATGGGCAACCTGGAGCTGC
GCTCTGAGGACATCAAAATAGCCAATGCACAGACATTTTTGATGGCTCAG
CGGCAGCAACAGCACCTACAGCACTTGCAACAGGGGCCGCAGGGGCAGCA
GGGACAACAGCAGCAATCCCTTTTCCATCATTTCCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAAATAGCCGCCACCGCAGGGGGAATGGGTGCG
GGTTTGTCGTCTGCGCTTTTTAGTCAAAGTGCTGGTCTCTTGGCCGCTCA
GCAGgtatgtatgtgtatgcatgtatgtttatgtatgtgtatgtatgttt
gtgtgtttacgtatgtgtatgtatgtgtttgcaattaattccgcccgggc
ttttatatccggtccgtcagtatgtatctgcctatagcccacttattccg
cctacgctttcttcttctcccacgctcatgctatatgtcttggctctgtc
gtgtgcacgtcacatgctgccctattttggtcatggtggatcaagtcacg
cttccctctgttctcgaccctcaaacagGCGCAGCAGCAGAATCCCATCC
TATCCCAGCAGCAAGCATTTGCCCAGAGCGTGTACACCAAGTATGGACCG
CAATGTAACGGGGGGTACCCTAGCCCGCTCAAAACACCCGGGGCGCCTAT
CAAGACCACAGACAGCGACAAGGGCCCGGAGGGATGCAATTTGTTTGTCT
TTCACATCCCTAACGACATGACGAACCTCGACTTATACCAGgcacgacaa
ttccttccttttatttctccctccccctgcactcccttccctggtcgctg
tttatgggactctaatttctcattcggttttgattttcgtggccttttat
actcgatcaattcgaagcactcacccgcgaaccctcccttctttcttccc
tccatcccccttcccttcagATGTTCTCTACCTTCGGTCAAGTCATCTCC
GCCCGCATCATGGTCGACAAGGTCACAGGCCGCTCGCGTGGCTTCGGCTT
CGTCAGCTACAACAACCCTGACTCGGCACTCCAAGCCATCGAGGCAATGA
ATGGTTTCGTGGTCGGACATAAGCGACTCAAGGTGGAGCAGAAAAAAGAC
AAGTCATCCCTGGGAATGTCCGGCATGGGTGGATCCATAGGGGGACACGG
AGCCCCTTCCTCAGCCTTCTCTGCCTCTGATACGTTGTCCCCTCACGGCA
GTAACCCTTTAATGATTGGCTCAGGTGGAGCGCCCGCCCCTCTCCACGCG
CTGCAGCGGTGGCAAGCGCACTTGGCTAGTCAGGCCGCGCTTCAGCAGCA
GCAGGTTCAATATGGCGGCATGCCTTTGCCGCAGCACCAACAGCACCAGC
ACCAGCAGGCACATGTGAACATCACGCAGCCGCCGCACCAGCATCAACAA
CAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACA
CCAATACCAGCAGCAGCAGCAGAAGCAGCAGCAGGCCGGTGGTTTGATGG
TTGGCGATGGGGGCCCTGAGTTTGGAAGCATGGGTGGAGGAGAAGTGGGG
CCAGGACAGGCCAGGAATTTCAACAGCGGGTCGATGGCAGCGGATCGGCC
TTCTTCCCAGTACATTTCGCATGTTGCGGGGCTGTATCAAGGCTAGATTG
CTAGAAGCTGATATGATATGTGAGGAATTTTCAGGAAGGTAGACAAGGAC
GAATTGAAGCGAAACGAGGAGTAAGACTTGATTGAGTACAAAAAGGCGCC
Ggtacgtgcgtcctactcctgtccattctttgtgtagccggcatctattc
attctcacgctgacacacctacaaactttccctgttcccccaattgtttt
ttatcacacgccgatctagAAAGTAGAATCGATAGAAGGATATCAGGCGT
GGGCTTGCACTAGGGACACCGATAATTTGGGAAGCAGCCGATGAGACCAC
CGAGGTGGACAAGGGAACAGTACATTTAAATTCATGTGAAGAATGAGAGA
AAGAGATATAGGCAGGCTACGTATTGGTGTTTTTTGTGCTCTTTTATGAG
TGAAAGAGGGATAATTCTTAGTATATTACTTGAGCATTGCGTATGTGTCC
TTGCGCTATAAACGATAGGGAGGGCTCAGTGACAAAGGAGAAATTAGCAA
GGTTGCAGGTGACTTTGAAGGAAGAAAGGGAGAAGCGAGAGGGCCTGCCA
CCGATGGAGGGATATGTATGTTCGCGCGCGGAGTTGCTCTTTTGCTGTCA
GCACCCTTTGGTGGGTCGCCCGTCGTATTTGTATTTTAGGTCTCTCCTCC
TTATCTTCACTTTCTTTTTCTCCCTTTTATAAAACAACTTGTGTATGAGA
GTGTGTGTCTTTGTGTGTATGAGAATTCGTTTGTTTGAAAGTAAGAGAAA
GAGAAAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAG
back to top

protein sequence of NO05G02600.1

>NO05G02600.1-protein ID=NO05G02600.1-protein|Name=NO05G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MDTASTTTMPGPTGSTGPAGEGGNNFNAFVTPTGGGLFAYEPPFPKGSPT
PSSSSSPPPTNPGHENVLGATGNVSGGSRPDSSSPSLDAAEDSSSPAAVP
PQGSLSSSQHQKQEDDGISPSVPPSEEAQQMADKSSKGKQNSHTTASTSE
TLDTTAAAAAAAAGEKQHQDQPGEQNARLLDTLLTDNYTNNPAVGVSDAG
PYPPSAAMGFDATLAATTLSMGNLELRSEDIKIANAQTFLMAQRQQQHLQ
HLQQGPQGQQGQQQQSLFHHFQQQQQQQQQQQQIAATAGGMGAGLSSALF
SQSAGLLAAQQAQQQNPILSQQQAFAQSVYTKYGPQCNGGYPSPLKTPGA
PIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQARQFLPFISPSPCTPFPG
RCLWDSNFSFGFDFRGLLYSINSKHSPANPPFFLPSIPLPFRCSLPSVKS
SPPASWSTRSQAARVASASSATTTLTRHSKPSRQ*
back to top

protein sequence of NO05G02600.2

>NO05G02600.2-protein ID=NO05G02600.2-protein|Name=NO05G02600.2|organism=Nannochloropsis oceanica|type=polypeptide|length=624bp
MDTASTTTMPGPTGSTGPAGEGGNNFNAFVTPTGGGLFAYEPPFPKGSPT
PSSSSSPPPTNPGHENVLGATGNVSGGSRPDSSSPSLDAAEDSSSPAAVP
PQGSLSSSQHQKQEDDGISPSVPPSEEAQQMADKSSKGKQNSHTTASTSE
TLDTTAAAAAAAAGEKQHQDQPGEQNARLLDTLLTDNYTNNPAVGVSDAG
PYPPSAAMGFDATLAATTLSMGNLELRSEDIKIANAQTFLMAQRQQQHLQ
HLQQGPQGQQGQQQQSLFHHFQQQQQQQQQQQQIAATAGGMGAGLSSALF
SQSAGLLAAQQAQQQNPILSQQQAFAQSVYTKYGPQCNGGYPSPLKTPGA
PIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKV
TGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSG
MGGSIGGHGAPSSAFSASDTLSPHGSNPLMIGSGGAPAPLHALQRWQAHL
ASQAALQQQQVQYGGMPLPQHQQHQHQQAHVNITQPPHQHQQQQQQQQQQ
QQQQQQQQHQYQQQQQKQQQAGGLMVGDGGPEFGSMGGGEVGPGQARNFN
SGSMAADRPSSQYISHVAGLYQG*
back to top

protein sequence of NO05G02600.3

>NO05G02600.3-protein ID=NO05G02600.3-protein|Name=NO05G02600.3|organism=Nannochloropsis oceanica|type=polypeptide|length=624bp
MDTASTTTMPGPTGSTGPAGEGGNNFNAFVTPTGGGLFAYEPPFPKGSPT
PSSSSSPPPTNPGHENVLGATGNVSGGSRPDSSSPSLDAAEDSSSPAAVP
PQGSLSSSQHQKQEDDGISPSVPPSEEAQQMADKSSKGKQNSHTTASTSE
TLDTTAAAAAAAAGEKQHQDQPGEQNARLLDTLLTDNYTNNPAVGVSDAG
PYPPSAAMGFDATLAATTLSMGNLELRSEDIKIANAQTFLMAQRQQQHLQ
HLQQGPQGQQGQQQQSLFHHFQQQQQQQQQQQQIAATAGGMGAGLSSALF
SQSAGLLAAQQAQQQNPILSQQQAFAQSVYTKYGPQCNGGYPSPLKTPGA
PIKTTDSDKGPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKV
TGRSRGFGFVSYNNPDSALQAIEAMNGFVVGHKRLKVEQKKDKSSLGMSG
MGGSIGGHGAPSSAFSASDTLSPHGSNPLMIGSGGAPAPLHALQRWQAHL
ASQAALQQQQVQYGGMPLPQHQQHQHQQAHVNITQPPHQHQQQQQQQQQQ
QQQQQQQQHQYQQQQQKQQQAGGLMVGDGGPEFGSMGGGEVGPGQARNFN
SGSMAADRPSSQYISHVAGLYQG*
back to top
Synonyms
Publications