NO05G02400, NO05G02400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_039992257.1 (DNA polymerase I [Paraglaciecola chathamensis]) HSP 1 Score: 151.0 bits (380), Expect = 8.900e-33 Identity = 97/306 (31.70%), Postives = 162/306 (52.94%), Query Frame = 0 Query: 121 AIQPAPSSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL-PMLSSPSSSSWVSLEHLRYLGVDEVEGEALMEEAMGA 426 A P + F ++D +S L+R++ L + G+ + + L+ + NP ++A FD + FR ++ YK NR + P EL + + ++A+G E DD++GTL+ A L + T++ T DKDM LV++ +++ QI D V K G+PP LV D L L GD VD IPGV GVG ++AV LL+ GS++ +Y NLD +A + + RGAK +A+K+R+ +E + ++ + DV+++ P SP+ +++ L L E+E + ++EA A Sbjct: 7 ATTPVIPNNPFILVDGSSYLFRAFHGMPPLTNSKGQDTGAVYGVINMLRSLIKQFNPTHMAVVFDA-KGKTFRDEIYTEYKANRPSMPEELRSQIAPLHKIIQAMGLPIIVESGVEADDVIGTLADQASKL--GIPTLISTGDKDMAQLVNEH--VTLINTMNNQIMDPQGVVEKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAVGLLQGIGSINEIYQNLDKIATL-DFRGAKKMADKMREYEEQARLSYTLATIKLDVEMDCSPTSLSPTEANYSELRDL----FAELEFKRWLKEATDA 302
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_068611789.1 (flap endonuclease [Woeseia oceani] >ANO49910.1 hypothetical protein BA177_00575 [Woeseia oceani]) HSP 1 Score: 151.0 bits (380), Expect = 8.900e-33 Identity = 94/266 (35.34%), Postives = 135/266 (50.75%), Query Frame = 0 Query: 132 FILDATSLLYRSYFS-KYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQ-------GKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLELP 390 +++D + ++R++FS + D DG + + R P YVA FD FR ++P YK NRD P EL Y RA+G + + P +E DDL+GTL + + + +V+ DKD+ L+S Q GK + + + ++F GV P +AD L LAGD VD IPGV GVG +TA LL+ FGSL +YANLD+V V +RGAKTL KL + + R + +ACD + P Sbjct: 3 YLIDGSVYVFRAWFSMPDDMLDDDGNPVNAFYGFCRFLGDFMERVRPEYVAVLFDESLSGSFRTEIYPNYKANRDPAPPELKRQFDLCRQYARAMGILEYAQPGYEADDLIGTL--VTSGREQGIPSTIVSRDKDLAQLISRQDVFWDFAGKGQLRYEQIPEVF---------GVWPEQIADFLALAGDAVDNIPGVPGVGKKTAAALLQHFGSLQGIYANLDSVHEV-TVRGAKTLGAKLEMHRPAAMLARQLTGIACDAPVTNP 256
BLAST of NO05G02400 vs. NCBI_GenBank
Match: PKN59110.1 (hypothetical protein CVU56_01950 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14]) HSP 1 Score: 151.0 bits (380), Expect = 8.900e-33 Identity = 98/257 (38.13%), Postives = 133/257 (51.75%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTF-VMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL 389 +LD T+L+YR++ + DG + + A+ + + A +D D FRR + GYK +R A P LLA + RA RAL S P E DDLM TL+ A + LVT DKD+ LV D V +P + +FDEA V + +GVP D LAGD DG+PGV+GVGP+ A+ L+RAF SLD LYA LD V + LRGA + ++L + D R +VAL+ L L Sbjct: 11 VLDGTALVYRAFHGGARWTAADGSEVGAVHAFAQRLARWLGNARSRHFAVVWDAAGDS-FRRQIDAGYKAHRKAPPDALLAQLARARELTRALALTSLTVPGFEADDLMATLTVRA--RGDGLAVWLVTPDKDLYQLVDDAAPAVRVFNPVSKTVFDEARVAATLGVPARAAVDYFALAGDSSDGVPGVRGVGPRAAMELIRAFESLDGLYARLDEVPGLA-LRGAAAVQKRLDAGRADAERSRRLVALSSQAPLGL 263
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_036948662.1 (DNA polymerase I [Providencia alcalifaciens] >ETT03046.1 DNA-directed DNA polymerase [Providencia alcalifaciens PAL-3] >EUC98205.1 DNA-directed DNA polymerase [Providencia alcalifaciens PAL-1]) HSP 1 Score: 150.2 bits (378), Expect = 1.500e-32 Identity = 93/257 (36.19%), Postives = 140/257 (54.47%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLELP 390 ++D +S LYR+Y + L + G+ + + L+ ++ P++VA FD + FR LF YK +R P +L A + + A+G P E DD++GTL+ A S + ++ T DKDM LV + +++ T I VE+K GVPPSL+ D L L GD D IPGV GVG +TA+ LL+ GSLD++Y NLDA+A + RG+KTLA K+ + +E + + + DV+LE P Sbjct: 11 LVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYTPSHVAVVFDA-KGKTFRDELFESYKSHRPPMPDDLRAQIAPLHEMVEAMGLPLLVVPGVEADDVIGTLAREAS--SKGMPVLISTGDKDMAQLV--EPNITLINTMTNTILGPEEVEAKYGVPPSLIIDFLALMGDSSDNIPGVPGVGEKTALALLQGIGSLDDIYKNLDAIAPL-GFRGSKTLAPKMEENRELALLSYQLATIKTDVELEKP 261
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_071978144.1 (DNA polymerase I [Alteromonas sp. RW2A1] >APE04372.1 DNA polymerase I [Alteromonas sp. RW2A1]) HSP 1 Score: 150.2 bits (378), Expect = 1.500e-32 Identity = 85/264 (32.20%), Postives = 144/264 (54.55%), Query Frame = 0 Query: 124 PAPSSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLE 388 P F ++D +S L+R++ L + G+ + + L+ ++NP ++A FD + FR ++P YK NR A P EL + + T ++A+G P E DD++GT + A + T++ T DKDM LV+ +++ T Q+ D V++K G+PP LV D L L GD VD IPGV GVG ++A LL G +D++Y NLD +A + + RG+K++A K+ + +E + ++ ++ D++L+ Sbjct: 2 PESKKSPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAVVFDA-KGKTFRDDIYPEYKANRPAMPDELRSQIEPLHTIIKAMGLPVIVEPGVEADDVIGTFAKHA--TEKGIDTVISTGDKDMAQLVNQH--ITLINTMTNQVMDVEGVKTKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYQNLDKIADL-SFRGSKSMAAKMAEYEEQARLSYTLATISVDLELD 259
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_100970659.1 (DNA polymerase I [Alteromonas sp. MB-3u-76] >AUC86777.1 DNA polymerase I [Alteromonas sp. MB-3u-76]) HSP 1 Score: 150.2 bits (378), Expect = 1.500e-32 Identity = 85/264 (32.20%), Postives = 144/264 (54.55%), Query Frame = 0 Query: 124 PAPSSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLE 388 P F ++D +S L+R++ L + G+ + + L+ ++NP ++A FD + FR ++P YK NR A P EL + + T ++A+G P E DD++GT + A + T++ T DKDM LV+ +++ T Q+ D V++K G+PP LV D L L GD VD IPGV GVG ++A LL G +D++Y NLD +A + + RG+K++A K+ + +E + ++ ++ D++L+ Sbjct: 2 PESKKSPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAVIFDA-KGKTFRDDIYPEYKANRPAMPDELRSQIEPLHTIIKAMGLPVIVEPGVEADDVIGTFAKHA--TEKGIDTVISTGDKDMAQLVNQH--ITLINTMTNQVMDVEGVKTKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYQNLDKIADL-SFRGSKSMAAKMAEYEEQARLSYTLATISVDLELD 259
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_108478749.1 (DNA polymerase I [Providencia alcalifaciens]) HSP 1 Score: 150.2 bits (378), Expect = 1.500e-32 Identity = 93/257 (36.19%), Postives = 140/257 (54.47%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLELP 390 ++D +S LYR+Y + L + G+ + + L+ ++ P++VA FD + FR LF YK +R P +L A + + A+G P E DD++GTL+ A S + ++ T DKDM LV + +++ T I VE+K GVPPSL+ D L L GD D IPGV GVG +TA+ LL+ GSLD++Y NLDA+A + RG+KTLA K+ + +E + + + DV+LE P Sbjct: 11 LVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYTPSHVAVVFDA-KGKTFRDELFESYKSHRPPMPDDLRAQIAPLHEMVEAMGLPLLVVPGVEADDVIGTLAREAS--SKGMPVLISTGDKDMAQLV--EPNITLINTMTNTILGPEEVEAKYGVPPSLIIDFLALMGDSSDNIPGVPGVGEKTALALLQGIGSLDDIYKNLDAIAPL-GFRGSKTLAPKMEENRELALLSYQLATIKTDVELEKP 261
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_005600570.1 (DNA polymerase I [Actinobacillus pleuropneumoniae] >EFL79114.1 DNA polymerase I [Actinobacillus pleuropneumoniae serovar 2 str. 4226] >EFM88140.1 hypothetical protein appser2_4750 [Actinobacillus pleuropneumoniae serovar 2 str. S1536]) HSP 1 Score: 149.8 bits (377), Expect = 2.000e-32 Identity = 94/256 (36.72%), Postives = 140/256 (54.69%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL 389 ++D +S LYR++ + L + +G+ + + LV++ P+++A FD + FR LF YK +R P +L A V T ++ALG E DD++GTL+ A NV ++ T DKDM LV+D +++ + D V K G+PP L+ D L L GD D IPGVKGVG +TA+ LL+ GSL +YANLD VA + + RGAKTLA KL +K+ + + + DV+LE+ Sbjct: 11 LVDGSSYLYRAFHAFPPLTNKNGEPTGAMYGVLNMLKSLVAQVEPSHIAVVFDA-KGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEADDVIGTLAVQAANAGKNV--LISTGDKDMAQLVNDH--IMLINTMNNTLLDREGVIEKYGIPPELIIDYLALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANLDQVATL-SFRGAKTLAPKLEAEKDAAALSYLLATIKTDVELEV 260
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_005607242.1 (DNA polymerase I [Actinobacillus pleuropneumoniae] >EFL81037.1 DNA polymerase I [Actinobacillus pleuropneumoniae serovar 6 str. Femo] >EFM92512.1 hypothetical protein appser6_5490 [Actinobacillus pleuropneumoniae serovar 6 str. Femo]) HSP 1 Score: 149.8 bits (377), Expect = 2.000e-32 Identity = 94/256 (36.72%), Postives = 140/256 (54.69%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL 389 ++D +S LYR++ + L + +G+ + + LV++ P+++A FD + FR LF YK +R P +L A V T ++ALG E DD++GTL+ A NV ++ T DKDM LV+D +++ + D V K G+PP L+ D L L GD D IPGVKGVG +TA+ LL+ GSL +YANLD VA + + RGAKTLA KL +K+ + + + DV+LE+ Sbjct: 11 LVDGSSYLYRAFHAFPPLTNKNGEPTGAMYGVLNMLKSLVAQVEPSHIAVVFDA-KGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEADDVIGTLAVQAANAGKNV--LISTGDKDMAQLVNDH--IMLINTMNNTLLDREGVIDKYGIPPELIIDYLALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANLDQVATL-SFRGAKTLAPKLEAEKDAAALSYLLATIKTDVELEV 260
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_005596603.1 (DNA polymerase I [Actinobacillus pleuropneumoniae] >EFM85870.1 hypothetical protein appser1_5170 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] >ASU16422.1 DNA polymerase I [Actinobacillus pleuropneumoniae]) HSP 1 Score: 149.8 bits (377), Expect = 2.000e-32 Identity = 94/256 (36.72%), Postives = 140/256 (54.69%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL 389 ++D +S LYR++ + L + +G+ + + LV++ P+++A FD + FR LF YK +R P +L A V T ++ALG E DD++GTL+ A NV ++ T DKDM LV+D +++ + D V K G+PP L+ D L L GD D IPGVKGVG +TA+ LL+ GSL +YANLD VA + + RGAKTLA KL +K+ + + + DV+LE+ Sbjct: 11 LVDGSSYLYRAFHAFPPLTNKNGEPTGAMYGVLNMLKSLVAQVEPSHIAVVFDA-KGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEADDVIGTLAVQAANAGKNV--LISTGDKDMAQLVNDH--IMLINTMNNTLLDREGVIDKYGIPPELIIDYLALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANLDQVATL-SFRGAKTLAPKLEAEKDAAALSYLLATIKTDVELEV 260 The following BLAST results are available for this feature:
BLAST of NO05G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02400 ID=NO05G02400|Name=NO05G02400|organism=Nannochloropsis oceanica|type=gene|length=2141bpback to top protein sequence of NO05G02400.1 >NO05G02400.1-protein ID=NO05G02400.1-protein|Name=NO05G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bpback to top Synonyms
Publications
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