NO05G02390, NO05G02390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_106826536.1 (50S ribosomal protein L11 methyltransferase [Burkholderiales bacterium] >SPJ16483.1 methylase for 50S ribosomal subunit protein L11 [Burkholderiales bacterium]) HSP 1 Score: 102.4 bits (254), Expect = 3.600e-18 Identity = 69/214 (32.24%), Postives = 103/214 (48.13%), Query Frame = 0 Query: 212 FSPVSVGRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 F+P+S+GR +VP S+H+PP SA + I PG +G G+HP+T LCL +L + + G V+DYG GSGILSI A +GA + +G+D+ ALA+A++N NG + P + + T+ V+PGG +VLSG+ Q + Y + ++ FG G WV +VG R Sbjct: 110 FAPISIGRIWIVP--SWHEPPDPSA------CNVRIDPGIAFGTGTHPTTRLCLAWLDEH--LAPGSSVLDYGCGSGILSICAAVLGAADVLGVDIDPQALATARSNAERNGA--RAQYTSPEGLAVDRSRQFDLVLANILANPIVLLAPTLTRHVRPGGSIVLSGILERQAGAVMDAYRRT---------DPSLQLSVFGKDEG-WVAIVGAR 301
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_028874780.1 (50S ribosomal protein L11 methyltransferase [Tepidiphilus margaritifer]) HSP 1 Score: 101.7 bits (252), Expect = 6.100e-18 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 212 FSPVSV-GRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQW-----EEGLEKVEEVRN 409 F P+S+ GR +VP S+H+PP SA L + PG +G GSHP+T LCL +L + G+ V+DYG GSGIL+IAA ++GA VG+D+ AL +A+ N NGV +EL H RE+ + I AV+PGG L LSG+ EQ E + Y + +EG ++E +R+ Sbjct: 115 FEPISIDGRLWIVP--SWHEPPDPSA------ITLTLDPGLAFGTGSHPTTRLCLRWLLDH--VRPGDTVLDYGCGSGILAIAAAKLGAARVVGVDIDDKALEAARYNAERNGV--ALELHHAREL---PPGTFDRVVANILTKPLCVLAPIIAQAVRPGGELALSGILAEQAEEVVAAYAPWIALTLGAEDEGWIRLEGIRS 302
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_054894207.1 (MULTISPECIES: 50S ribosomal protein L11 methyltransferase [Pseudomonas] >OCT34016.1 ribosomal protein L11 methyltransferase [Pseudomonas putida] >OCT34118.1 ribosomal protein L11 methyltransferase [Pseudomonas putida] >OCT36065.1 ribosomal protein L11 methyltransferase [Pseudomonas putida] >OCT37911.1 ribosomal protein L11 methyltransferase [Pseudomonas putida]) HSP 1 Score: 101.7 bits (252), Expect = 6.100e-18 Identity = 74/231 (32.03%), Postives = 118/231 (51.08%), Query Frame = 0 Query: 197 VLNAMNWFKAAAEPGFSPVSVG-RFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGV-DQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 V+ +W ++ + GF P+ G R +VP S+H+ PE+ L + PG +G G+HP+T LCL++L +G G +V+D+G GSGIL+IAA+ +GAREAVG D+ A+ +++ N NG+ D+++ L P + ++ + G V+PGG L LSG+ EQ E + Y + + + VR+ WVR+ GRR Sbjct: 88 VIEDQDWERSWMD-GFQPMRFGQRLWIVP--SWHE------APEKDAVNLLLDPGLAFGTGTHPTTALCLEWL--DGQSLAGTQVLDFGCGSGILAIAALLLGAREAVGTDIDVQAIEASRDNAQRNGIADEKLALYLPEHM---PAMQADVLVANILAGPLVSLAPQLSGLVRPGGLLALSGILAEQGEEVAAAYAADFDLDPIV-----VRDG--------WVRISGRR 291
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_027920813.1 (MULTISPECIES: 50S ribosomal protein L11 methyltransferase [Pseudomonas] >SMF22212.1 [LSU ribosomal protein L11P]-lysine N-methyltransferase [Pseudomonas sp. URMO17WK12:I5]) HSP 1 Score: 101.3 bits (251), Expect = 7.900e-18 Identity = 75/231 (32.47%), Postives = 117/231 (50.65%), Query Frame = 0 Query: 197 VLNAMNWFKAAAEPGFSPVSVG-RFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGV-DQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 V+ +W ++ + GF P+ G R +VP S+HD PE+ L + PG +G G+HP+T LCL++L +G G +V+D+G GSGIL+IAA+ +GAREAVG D+ A+ +++ N NG+ D ++ L P + ++ + G V+PGG L LSG+ EQ E + Y + + + VR+ WVR+ GRR Sbjct: 88 VIEDQDWERSWMD-GFQPMRFGQRLWIVP--SWHD------APEKDAVNLLLDPGLAFGTGTHPTTALCLEWL--DGQQLQGTQVLDFGCGSGILAIAALLLGAREAVGTDIDVQAIEASRDNAQRNGIADDKLALYLPEHM---PAMQADVLVANILAGPLVSLAPQLSGLVRPGGLLALSGILAEQGEEVAAAYAADFDLDPIV-----VRDG--------WVRISGRR 291
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_054620268.1 (50S ribosomal protein L11 methyltransferase [Rhodocyclaceae bacterium Paddy-1]) HSP 1 Score: 101.3 bits (251), Expect = 7.900e-18 Identity = 67/190 (35.26%), Postives = 97/190 (51.05%), Query Frame = 0 Query: 202 NWFKAAAEPGFSPVSV-GRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKY 391 NW + + F P+ + GR +VP S+H+ P +A L + PG +G GSHP+T LCL++L E + GGE ++DYG GSGIL+IAA ++GA VG+D+ A+ +A AN N V ++ H + + + VKPGGWLVLSG+ EQ E + Y Sbjct: 100 NWVQ-LTQSQFDPIPISGRLWIVP--SWHEAPDPAA------VNLILDPGMAFGTGSHPTTRLCLEWL--EANLKGGETLLDYGCGSGILAIAAAKLGAARVVGVDIDPQAVDAAIANAERNAVS---DVSHFHDSAQAVQGQFDVVVANILSNPLKMLAPALASHVKPGGWLVLSGILAEQAEEMVALY 275
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_055422608.1 (50S ribosomal protein L11 methyltransferase [Tepidiphilus thermophilus] >CUB05156.1 [LSU ribosomal protein L11P]-lysine N-methyltransferase [Tepidiphilus thermophilus]) HSP 1 Score: 101.3 bits (251), Expect = 7.900e-18 Identity = 76/215 (35.35%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 212 FSPVSV-GRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 F P+ + GR +VP S+H+PP SA L + PG +G GSHP+T LCL +L + G+ V+DYG GSGIL IAA ++GA VG+D+ AL +A+ N NGV +EL H R++ + I AV+PGG L LSG+ EQ E + Y + EG E W+RL G R Sbjct: 114 FDPIPIDGRLWIVP--SWHEPPDPSA------ITLTLDPGLAFGTGSHPTTRLCLRWLLAH--VRPGDTVLDYGCGSGILGIAAAKLGAARVVGVDIDDKALETARYNAERNGV--ALELHHARDL---PPGTFDRVVANILTKPLCVLAPLIAQAVRPGGELALSGILAEQAEEVVAAYAPWIALTEGAEDEG-------------WIRLEGMR 300
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_060485311.1 (50S ribosomal protein L11 methyltransferase [Pseudomonas sp. NBRC 111123]) HSP 1 Score: 101.3 bits (251), Expect = 7.900e-18 Identity = 75/231 (32.47%), Postives = 117/231 (50.65%), Query Frame = 0 Query: 197 VLNAMNWFKAAAEPGFSPVSVG-RFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGV-DQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 V+ +W ++ + GF P+ G R +VP S+HD PE+ L + PG +G G+HP+T LCL++L +G G +V+D+G GSGIL+IAA+ +GAREAVG D+ A+ +++ N NG+ D ++ L P + ++ + G V+PGG L LSG+ EQ E + Y + + + VR+ WVR+ GRR Sbjct: 88 VIEDQDWERSWMD-GFQPMRFGQRLWIVP--SWHD------APEKNAVNLLLDPGLAFGTGTHPTTALCLEWL--DGQQLQGTQVLDFGCGSGILAIAALLLGAREAVGTDIDVQAIEASRDNAQRNGIADDKLALYLPEHM---PAMQADVLVANILAGPLVSLAPQLSGLVRPGGLLALSGILAEQGEEVAAAYAADFDLDPIV-----VRDG--------WVRISGRR 291
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_067169143.1 (50S ribosomal protein L11 methyltransferase [Sterolibacterium denitrificans] >KYC29047.1 ribosomal protein L11 methyltransferase [Sterolibacterium denitrificans] >SMB21296.1 methylase for 50S ribosomal subunit protein L11 [Sterolibacterium denitrificans]) HSP 1 Score: 101.3 bits (251), Expect = 7.900e-18 Identity = 78/227 (34.36%), Postives = 108/227 (47.58%), Query Frame = 0 Query: 202 NWFKAAAEPGFSPVSVG-RFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGL--WVRLVGRR 426 NW + + F P+ + R +VP S+H+PP +A L + PG +G GSHP+T LCL++L G + GGE V+DYG GSGIL+IAA ++GA +G+D+ +ALA+A+ N N V E+ L H RE + + V PGG LVLSG+ Q E + Y + GA L WVRL G R Sbjct: 102 NWVQ-LTQAQFDPIRINERLWIVP--SWHEPPDPAA------VNLLLDPGMAFGTGSHPTTRLCLEWLC--GALRGGESVLDYGCGSGILAIAAARLGAAPVLGVDIDENALAAARDNAAANRV--ELALRHSRE---PLEETFDCVVANILTNPLCVLAPLLAARVAPGGRLVLSGVLESQSEQVIAAYAPFI---------------ALRAGAVLDGWVRLEGER 297
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_085315117.1 (50S ribosomal protein L11 methyltransferase [Derxia lacustris]) HSP 1 Score: 100.9 bits (250), Expect = 1.000e-17 Identity = 87/305 (28.52%), Postives = 141/305 (46.23%), Query Frame = 0 Query: 98 LKEQQHYRVT--FVKEIKELGE-----LTDALIEQGALEVSYFTAEPLSFSLTLPVEGTIEVEAIMHLAWT---MIERQQXXXXXXXXXXXXXXXXXXXXXGWKYEKEIV--LNAMNWFKAAAEPGFSPVSVGRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKY 391 L +QH + T + + + +GE L DA+++ GAL V+ A+ L P+ G +E + AWT M+ G + ++E + ++ +W + A + F P+ +GR +VP S+H+P P + + + PG +G GSHP+T LCL++L +E + G RV+DYG GSGIL+IAA +GA E G+D+ +A+ +A+ N N V+ H E + ++ VKPGG LVLSG+ Q + + Y Sbjct: 119 LTGRQHAKETPMYAELVYRMGEAEAEALGDAMLDAGALSVTVEDAD-LDTDAEAPIFGEPGLEPQV-AAWTNNLMVVLIDAGESAEHAALALEARLAEVYAGRQPQREAIRLVDEQDWVR-ATQAQFDPIGIGRLWIVP--SWHEP------PAGAEHVMVLDPGMAFGTGSHPTTRLCLEWLERE--LPAGARVLDYGCGSGILAIAARLLGAGETEGLDIDLNAVIAARDNAARNRVEAR---FHDAET-SVSAGGFDVVVANILSNPLKVLAPALVAQVKPGGALVLSGVLERQADEVAAVY 406
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_027614880.1 (MULTISPECIES: 50S ribosomal protein L11 methyltransferase [Pseudomonas] >SOC96206.1 [LSU ribosomal protein L11P]-lysine N-methyltransferase [Pseudomonas sp. LAIL14HWK12:I3]) HSP 1 Score: 100.5 bits (249), Expect = 1.400e-17 Identity = 73/231 (31.60%), Postives = 119/231 (51.52%), Query Frame = 0 Query: 197 VLNAMNWFKAAAEPGFSPVSVG-RFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGV-DQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 V+ +W ++ + F P+ G R +VP S+HD PE+ L + PG +G G+HP+T LCL++L + + G +V+D+G GSGIL+IAA+ +GAREAVG D+ A+ +++ N NG+ D+++ L P ++ ++ + G V+PGG L LSG+ EQ E + Y + + + + VR+ WVR+ GRR Sbjct: 88 VIEDQDWERSWMD-NFQPMRFGQRLWIVP--SWHD------APEKDAVNLLLDPGLAFGTGTHPTTALCLEWLDAQQM--EGTQVLDFGCGSGILAIAALLLGAREAVGTDIDVQAIEASRDNAQRNGIADEKLALYLPEQM---PAMQADVLVANILAGPLVSLAPQLSGLVRPGGLLALSGILAEQGEEVAAAYAADFELDPIV-----VRDG--------WVRISGRR 291 The following BLAST results are available for this feature:
BLAST of NO05G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02390 ID=NO05G02390|Name=NO05G02390|organism=Nannochloropsis oceanica|type=gene|length=3117bpback to top protein sequence of NO05G02390.1 >NO05G02390.1-protein ID=NO05G02390.1-protein|Name=NO05G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=442bpback to top Synonyms
Publications
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