NO05G02260, NO05G02260 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02260
Unique Name	NO05G02260
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1800
Alignment location	chr5:600321..602120 +

Link to JBrowse

Properties


Property Name	Value
Description	Lipoyl synthase, mitochondrial

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:600321..602120 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0051536	iron-sulfur cluster binding
GO:0016740	transferase activity
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR031691	LIAS_N
IPR007197	rSAM
IPR006638	Elp3/MiaB/NifB

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0006629	lipid metabolic process
GO:0006464	cellular protein modification process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005739	mitochondrion

Homology

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: EWM28169.1 (lipoic acid synthetase [Nannochloropsis gaditana])

HSP 1 Score: 570.1 bits (1468), Expect = 5.400e-159
Identity = 283/344 (82.27%), Postives = 305/344 (88.66%), Query Frame = 0

Query:   47 SSARLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPAPRRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQ 391
            SS RL+ LR++L+EEDAA       P    +P+        P  RR+KR EPKP WLKAVPAEGENYLRLK+TVRKLKLATVCEEARCPNIGECWGGGK+GTATATIMIMGDTCTRGCSFCAVKTSRTPA LDPLEPEHVA+AI EWGLDYVVLTSVDRDDL DQGSEHFA+TVRGLK RKP+LLVECLTPDFRGQA+LIE VA SGLDVYAHNLETVER+QRRVRDHRAGYSQSLFVLEHAKK  P LLTKTSLMLGVGERPED+RATLRDLRTAGVDVVTFGQYLRPTKRHMPV+A++TP +FQ WQ EAE L FKYVASGPLVRSSYKAGEFFLKG+LK++
Sbjct:   44 SSPRLDRLREKLKEEDAA--HAGTCPTHGALPDKEVPKATFPVARRRKRSEPKPEWLKAVPAEGENYLRLKNTVRKLKLATVCEEARCPNIGECWGGGKDGTATATIMIMGDTCTRGCSFCAVKTSRTPAPLDPLEPEHVARAIAEWGLDYVVLTSVDRDDLVDQGSEHFAKTVRGLKARKPTLLVECLTPDFRGQASLIERVALSGLDVYAHNLETVERLQRRVRDHRAGYSQSLFVLEHAKKRAPKLLTKTSLMLGVGERPEDVRATLRDLRTAGVDVVTFGQYLRPTKRHMPVQAYITPAQFQAWQAEAEALNFKYVASGPLVRSSYKAGEFFLKGVLKQR 385

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: XP_008873914.1 (lipoyl synthase, mitochondrial [Aphanomyces invadans] >ETV97705.1 lipoyl synthase, mitochondrial [Aphanomyces invadans])

HSP 1 Score: 460.7 bits (1184), Expect = 4.600e-126
Identity = 226/344 (65.70%), Postives = 267/344 (77.62%), Query Frame = 0

Query:   49 ARLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPAPRRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQEE 393
            +RLE LR QL EE AA +   ++    +V             RR      KP WLKA P  GENY+RL+ TVR LKLATVCEEARCPNIGECWGGGK GTATATIM+MGDTCTRGCSFCAVKTSR P  LDP EP +V++AI +WGLDY+V TSVDRDDL D G+EHFA TVR L+   P +L+ECLTPDF G+ +L+E VA SGLDV+AHN+ETVER+QRRVRD+RA Y QSL VLE AK  +P+L+TKTS+MLGVGE PEDI  TL+DLRT+GVDVVTFGQYLRP+ +HMPV A++TPE F EWQ  AE +GF YVASGP+VRSSYKAGE+FL  LL+ +++
Sbjct:   16 SRLEALRAQLAEE-AAKVREPIVSWGDNVLRAEDLASPVKPSRRPSASNRKPDWLKAQPTTGENYIRLRDTVRSLKLATVCEEARCPNIGECWGGGKNGTATATIMLMGDTCTRGCSFCAVKTSRRPPPLDPNEPANVSKAIAQWGLDYIVFTSVDRDDLPDAGAEHFASTVRHLRAALPEILIECLTPDFSGRVDLVETVARSGLDVFAHNIETVERLQRRVRDYRANYRQSLHVLELAKAAQPSLITKTSIMLGVGESPEDIMQTLKDLRTSGVDVVTFGQYLRPSTKHMPVAAYITPEAFAEWQKVAESMGFLYVASGPMVRSSYKAGEYFLTNLLRGKKQ 358

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: CCI49885.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 459.9 bits (1182), Expect = 7.800e-126
Identity = 225/344 (65.41%), Postives = 273/344 (79.36%), Query Frame = 0

Query:   50 RLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPAP-RRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQEE 393
            RLE LR+QL +E   G+  +       V  T  +++ +  P R+   +  KPSWLKA P  G NY RLK TV +L LATVCEEARCPNIGECWGGGK+G ATATIM+MGDTCTRGCSFCAVKTSR PA LDP EP  V++AI++WGLDYVV TSVDRDD ED G+ HFA+TVR L+ RKP +++ECLTPDF+GQ  L+E VATSGLDV+AHN+ETVER+QRRVRDHRA Y QSL VL++AK+C PTL+TKTS+MLG+GE+ +D+ ATL DLR   VDVVTFGQYLRP+ +HMPVK ++TP++F+EWQ  AE +GF YVASGPLVRSSYKAGEFF+  LL+K  +
Sbjct:   52 RLEALRQQLAKEFHEGVTFT--DYAFSVSTTAQNEERSNKPSRKPTALNRKPSWLKAQPTLGPNYERLKKTVNELGLATVCEEARCPNIGECWGGGKDGVATATIMLMGDTCTRGCSFCAVKTSRKPAPLDPEEPNKVSKAISDWGLDYVVFTSVDRDDYEDFGANHFAETVRLLRRRKPGIIIECLTPDFQGQKELVEIVATSGLDVFAHNVETVERLQRRVRDHRANYQQSLAVLQYAKQCVPTLVTKTSIMLGLGEKADDVVATLGDLRAHSVDVVTFGQYLRPSVKHMPVKEYITPQQFEEWQKLAEKMGFLYVASGPLVRSSYKAGEFFMTKLLQKSNK 393

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: CCA20116.1 (lipoic acid synthetase putative [Albugo laibachii Nc14])

HSP 1 Score: 459.1 bits (1180), Expect = 1.300e-125
Identity = 223/341 (65.40%), Postives = 272/341 (79.77%), Query Frame = 0

Query:   50 RLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPAP-RRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKK 390
            RLE LR+QL +E   G + +     + V      +D +  P R+      KP WLKA+P  G NY RLK TV++L LATVCEEARCPNIGECWGGGK+G ATATIM+MGDTCTRGCSFCAVKTSR PA LDP EP  V++AI++WGLDYVV TSVDRDD ED G+ HFA+TV  L+ RKP +++ECLTPDF+GQ  L+E VA+SGLDV+AHN+ETVER+QRRVRDHRA Y QSL VL++AK+C PTL+TKTSLMLG+GE+ E++ ATLRDLR   VDVVTFGQYLRP+ +H+PVK ++TP++F+EWQ  AEG+GF YVASGPLVRSSYKAGEFF+  LL++
Sbjct:   57 RLEALRQQLAKEYQVGTSFN--DCVLSVSNNSPKEDKSGKPSRKPTASNRKPDWLKALPTSGPNYERLKKTVKELGLATVCEEARCPNIGECWGGGKDGVATATIMLMGDTCTRGCSFCAVKTSRKPAPLDPDEPHKVSKAISDWGLDYVVFTSVDRDDYEDFGANHFAETVGLLRNRKPGIIIECLTPDFQGQRGLVEIVASSGLDVFAHNVETVERLQRRVRDHRANYRQSLMVLQYAKQCVPTLVTKTSLMLGLGEQAEEVLATLRDLRAHNVDVVTFGQYLRPSVKHLPVKEYITPQQFEEWQEIAEGMGFLYVASGPLVRSSYKAGEFFMTKLLQR 395

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: XP_009836562.1 (lipoyl synthase, mitochondrial [Aphanomyces astaci] >ETV74049.1 lipoyl synthase, mitochondrial [Aphanomyces astaci])

HSP 1 Score: 458.0 bits (1177), Expect = 3.000e-125
Identity = 228/348 (65.52%), Postives = 269/348 (77.30%), Query Frame = 0

Query:   49 ARLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSS--DDVAPAP-RRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQEER 394
            +RLE LR+QL EE     A  +  P +   + V S  D VA  P RR      KP WLKA P  GENY+RL+ TVR LKLATVCEEARCPNIGECWGGGK GTATATIM+MGDTCTRGCSFCAVKTSR P  LDP EP +V++AI +WGLDY+V TSVDRDDL D G+EHFA TVR L+   P +L+ECLTPDF G+ +L+E VA SGLDV+AHN+ETVER+QRRVRD+RA Y QSL VLE AK  +P+L+TKTS+MLGVGE PED+  TL+DLR +GVDVVTFGQYLRP+ +HMPV A++TP+ F  WQ  AE LGF YVASGP+VRSSYKAGE+FL  LL+  + +
Sbjct:   16 SRLEALREQLAEE-----ASKVRDPIVSWGDNVLSAEDLVATKPSRRPSASNRKPDWLKAQPTTGENYIRLRDTVRSLKLATVCEEARCPNIGECWGGGKNGTATATIMLMGDTCTRGCSFCAVKTSRRPPPLDPNEPANVSKAIAQWGLDYIVFTSVDRDDLPDAGAEHFASTVRQLRAALPEILIECLTPDFSGRVDLVETVARSGLDVFAHNIETVERLQRRVRDYRANYRQSLAVLELAKAAQPSLITKTSIMLGVGETPEDVMQTLQDLRASGVDVVTFGQYLRPSTKHMPVAAYITPDAFAHWQKVAESLGFLYVASGPMVRSSYKAGEYFLTNLLRGHKNK 358

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: OWZ02741.1 (Lipoyl synthase, mitochondrial [Phytophthora megakarya])

HSP 1 Score: 454.5 bits (1168), Expect = 3.300e-124
Identity = 230/365 (63.01%), Postives = 271/365 (74.25%), Query Frame = 0

Query:   33 ALPRSCKARGLA-----SYSSARLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPAP-RRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQE 392
            AL   C +   A     S   +RL  LR++LEEE   G   +     + + +     DV   P R+      KP WLKA P EG NY RL+ TV+ L L+TVCEEA+CPNIGECWGGGK+G ATATIM+MGDTCTRGCSFCAVKTS+ PA LDP EP +VA+AI  WGLDY+V TSVDRDD ED G+ HFAQTV  L+ + P +L+ECLTPDF+G  NLI+ VATSGLDV+AHNLETVER+QRRVRD+RA Y QSL VLE  K   P L+TKTSLMLGVGER ED+  TLRDLR +GVDVVTFGQYLRP+ +HMPVK++VTPE F EWQ  AE +GF YVASGP+VRSSYKAGEFF+K LLK ++
Sbjct:   10 ALQHRCMSSAAAVQVTHSERGSRLAALRQRLEEEAHQG--PTFAEQALSLEDFAFETDVGTKPSRKPNASNRKPKWLKAQPTEGANYERLRKTVKSLGLSTVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAVKTSKKPAPLDPEEPNNVAEAIAAWGLDYIVFTSVDRDDYEDLGAGHFAQTVSTLRAKLPEILIECLTPDFQGHNNLIDQVATSGLDVFAHNLETVERLQRRVRDYRANYKQSLHVLERVKVAAPHLVTKTSLMLGVGERNEDVFQTLRDLRNSGVDVVTFGQYLRPSTKHMPVKSYVTPEAFAEWQKVAEQMGFLYVASGPMVRSSYKAGEFFMKNLLKNRK 372

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: OQR86898.1 (lipoic acid synthetase, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 450.7 bits (1158), Expect = 4.800e-123
Identity = 226/365 (61.92%), Postives = 272/365 (74.52%), Query Frame = 0

Query:   44 ASYSSARLENLRKQLEEEDAAGIAMSLIPPTIH---------------VPETVSSDDVAPAPRRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQEER 394
            A+  S+RL  LR+QL +E     A++L     H               +   ++S D     R+      KPSWLKA P  G+NY+RL+ TVR L LATVCEEARCPNIGECWGGGK GTATATIM+MGDTCTRGCSFCA+KTS+ P  LD  EP+ V++AI  WGLDYVV TSVDRDDL D G+ HFA TV  L+ R P +L+ECLTPDF G+ +LIE VATSGLDV+AHN+ETVERMQRRVRDHRA Y QSL VLE AKK +PTL+TKTSLMLGVGE+P ++  TL+DLR++GVDVVTFGQYLRP+ RHMPV  +V+PE F+EWQ   E +GF YVASGP+VRSSYKAGEFFL  LL+ ++++
Sbjct:   12 AAQRSSRLTALREQLAQE-----ALALEEAKKHQLDASWGDNIIKAEDLDALMTSPDSVKPSRKPNASNRKPSWLKAQPTSGDNYIRLRDTVRSLGLATVCEEARCPNIGECWGGGKNGTATATIMLMGDTCTRGCSFCAIKTSKCPPPLDQDEPDKVSRAIASWGLDYVVFTSVDRDDLPDAGAHHFASTVSLLRERLPEILIECLTPDFSGRVDLIEQVATSGLDVFAHNVETVERMQRRVRDHRANYRQSLAVLEAAKKVKPTLVTKTSLMLGVGEKPAEVLQTLKDLRSSGVDVVTFGQYLRPSTRHMPVAEYVSPEAFEEWQKVGESMGFLYVASGPMVRSSYKAGEFFLTNLLRDKKKQ 371

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: KUF90588.1 (Thioredoxin reductase 1 [Phytophthora nicotianae])

HSP 1 Score: 449.1 bits (1154), Expect = 1.400e-122
Identity = 222/350 (63.43%), Postives = 263/350 (75.14%), Query Frame = 0

Query:   45 SYSSARLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPA---PRRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQE 392
            S   +RL  LR++L EE   G         + + +     D AP     R+      KP WLKA P +G NY RL+ TV+ L L+TVCEEA+CPNIGECWGGGK+G ATATIM+MGDTCTRGCSFCAVKTS+ P  LDP EP  VA+AI  WGLDY+V TSVDRDD ED G+ HFA+TV  L+ + P +L+ECLTPDF+G  NLI+ VATSGLDV+AHN+ETVER+QRRVRD+RA Y QSL VLE AK   P L+TKTSLMLGVGER ED+  TLRDLR +GVDVVTFGQYLRP+ +HMPVK++VTPE F EWQ  AE +GF YVASGP+VRSSYKAGEFF+K LLK ++
Sbjct:   31 SEPGSRLAALRERLAEESRQGPTFE--EQALSLEDFAFEADAAPGTKPSRKPNASNRKPKWLKAQPTQGANYERLRKTVKSLGLSTVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAVKTSKKPKPLDPEEPNKVAEAIAAWGLDYIVFTSVDRDDYEDLGARHFAKTVSTLRAKLPEILIECLTPDFQGHDNLIDQVATSGLDVFAHNMETVERLQRRVRDYRANYKQSLHVLERAKVAAPHLVTKTSLMLGVGERNEDVFQTLRDLRNSGVDVVTFGQYLRPSTKHMPVKSYVTPEAFAEWQKVAEQMGFLYVASGPMVRSSYKAGEFFMKNLLKNRK 378

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: XP_008608559.1 (lipoyl synthase, mitochondrial [Saprolegnia diclina VS20] >EQC38232.1 lipoyl synthase, mitochondrial [Saprolegnia diclina VS20])

HSP 1 Score: 448.4 bits (1152), Expect = 2.400e-122
Identity = 223/360 (61.94%), Postives = 270/360 (75.00%), Query Frame = 0

Query:   44 ASYSSARLENLRKQLEEEDAA----------GIAMSLIPPTIHVPETVSSDDVAPAPRRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQEER 394
            A+  S+RL  LR+QL EE  A                +     +   ++S +     R+      KPSWLKA P  G+NYLRL+ TVR L LATVCEEARCPNIGECWGGGK GTATATIM+MGDTCTRGCSFCA+KTS+ P ALD  EP+ V++AI  WGLDYVV TSVDRDDL D G++HFA TV  L+ R P +L+ECLTPDF G+ +LIE VA SGLDV+AHN+ETVERMQRRVRDHRA Y QSL VLE AKK +PTL+TKTS+MLGVGE+P ++  TL+DLR++GVDVVTFGQYLRP+ RHMPV  +++PE F+EWQ   E +GF YVASGP+VRSSYKAGEFFL  LL+ ++++
Sbjct:   13 AAKRSSRLVALREQLAEEAIALNEAKKNKLDATWGDNVIKAEDLDSLMASPESVKPSRKPNASNRKPSWLKAQPTSGDNYLRLRDTVRSLGLATVCEEARCPNIGECWGGGKNGTATATIMLMGDTCTRGCSFCAIKTSKRPPALDLEEPDKVSRAIASWGLDYVVFTSVDRDDLPDAGAQHFASTVSLLRERLPEILIECLTPDFSGRVDLIEQVALSGLDVFAHNVETVERMQRRVRDHRANYRQSLAVLEAAKKVKPTLVTKTSIMLGVGEKPAEVLQTLKDLRSSGVDVVTFGQYLRPSTRHMPVAEYISPEAFEEWQKVGESMGFLYVASGPMVRSSYKAGEFFLTNLLRDKKKQ 372

[Close]

BLAST of NO05G02260 vs. NCBI_GenBank
Match: ETI37440.1 (lipoyl synthase, mitochondrial [Phytophthora parasitica P1569] >ETM37533.1 lipoyl synthase, mitochondrial [Phytophthora parasitica])

HSP 1 Score: 448.4 bits (1152), Expect = 2.400e-122
Identity = 222/350 (63.43%), Postives = 263/350 (75.14%), Query Frame = 0

Query:   45 SYSSARLENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPA---PRRQKRMEPKPSWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTATATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVLTSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVATSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTSLMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPERFQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQE 392
            S   +RL  LR++L EE   G         + + +     D AP     R+      KP WLKA P +G NY RL+ TV+ L L+TVCEEA+CPNIGECWGGGK+G ATATIM+MGDTCTRGCSFCAVKTS+ P  LDP EP  VA+AI  WGLDY+V TSVDRDD ED G+ HFA+TV  L+ + P +L+ECLTPDF+G  NLI+ VATSGLDV+AHN+ETVER+QRRVRD+RA Y QSL VLE AK   P L+TKTSLMLGVGER ED+  TLRDLR +GVDVVTFGQYLRP+ +HMPVK++VTPE F EWQ  AE +GF YVASGP+VRSSYKAGEFF+K LLK ++
Sbjct:   31 SERGSRLAALRERLTEESRQGPTFE--EQALSLEDFAFEADAAPGTKPSRKPNASNRKPKWLKAQPTQGANYERLRKTVKSLGLSTVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAVKTSKKPKPLDPEEPNKVAEAIAAWGLDYIVFTSVDRDDYEDLGAGHFAKTVSTLRAKLPEILIECLTPDFQGHDNLIDQVATSGLDVFAHNMETVERLQRRVRDYRANYKQSLHVLERAKVAAPHLVTKTSLMLGVGERNEDVFQTLRDLRNSGVDVVTFGQYLRPSTKHMPVKSYVTPEAFAEWQKVAEQMGFLYVASGPMVRSSYKAGEFFMKNLLKNRK 378

The following BLAST results are available for this feature:

BLAST of NO05G02260 vs. NCBI_GenBank

BLAST of NO05G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28169.1	5.400e-159	82.27	lipoic acid synthetase [Nannochloropsis gaditana]	[more]
XP_008873914.1	4.600e-126	65.70	lipoyl synthase, mitochondrial [Aphanomyces invada...	[more]
CCI49885.1	7.800e-126	65.41	unnamed protein product [Albugo candida]	[more]
CCA20116.1	1.300e-125	65.40	lipoic acid synthetase putative [Albugo laibachii ...	[more]
XP_009836562.1	3.000e-125	65.52	lipoyl synthase, mitochondrial [Aphanomyces astaci...	[more]
OWZ02741.1	3.300e-124	63.01	Lipoyl synthase, mitochondrial [Phytophthora megak...	[more]
OQR86898.1	4.800e-123	61.92	lipoic acid synthetase, mitochondrial precursor [A...	[more]
KUF90588.1	1.400e-122	63.43	Thioredoxin reductase 1 [Phytophthora nicotianae]	[more]
XP_008608559.1	2.400e-122	61.94	lipoyl synthase, mitochondrial [Saprolegnia diclin...	[more]
ETI37440.1	2.400e-122	63.43	lipoyl synthase, mitochondrial [Phytophthora paras...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003640	NSK003640	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G02260.1	NO05G02260.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584250	gene_3028	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g150	gene2396	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G02260.1	NO05G02260.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G02260 ID=NO05G02260|Name=NO05G02260|organism=Nannochloropsis oceanica|type=gene|length=1800bp
ACCAACAGGAGGTGCAGTCGTACCCACGACGTAAAATCGTTGCCGTCTGC
TTGCTACACCAAGAGCAGCACTCTTCAAGCGTCATGAGAGCTGTTGCTCG
CCATGCACCGTGTCGAAGTCTGCCTTATGGACAGATCCTCACCCGGCCAG
CACCAGCGGCAGCAACATTACCAGAAGCAGCATTACCGCGTAGTTGCAAG
GCCAGGGGCTTGGCTTCTTATTCGTCCGCACGCCTGGAAAACCTGCGCAA
GCAGCTGGAAGAAGAGGACGCCGCGGGGATTGCCATGTCCCTTATCCCAC
CTACCATTCATGTGCCAGAGACTGTCAGTTCCGACGATGTTGCCCCTGCT
CCACGACGACAAAAGCGCATGGAACCGAAGCCTAgtacgtgatgggatca
ttgtggttgcacagcttgatggcatggtgctgaccctcgatgtccccccc
ccaacccctccgacctcctcacttcagGTTGGCTGAAGGCCGTGCCCGCC
GAAGGCGAGAACTACCTCCGGTTGAAGAGTACGgtacgtattgatgaata
tcgaattgagtatgtcattataccctggcttctcaaaatcgccaatcccc
ttctcgtattctcatctcccattctatcccgcgccgcctagGTCCGGAAG
CTTAAGCTGGCAACGGTGTGCGAGGAGGCACGCTGCCCAAACATCGGGGA
GTGTTGGGGAGGTGGTAAGGAGGGCACGGCGACGGCGACGATCATGATTA
TGGGCGACACGTGCACGCGAGGCTGCAGCTTTTGCGCCGTTAAGACAAGC
CGAACACCAGCGGCACTGGgtacgtagatgaaggcgtataaatggacaga
gacgaagaaacgacggatttgtttaccaaattgccttgtttcctcatttt
acttcgaattgacacgatgcagACCCATTGGAGCCGGAGCACGTTGCACA
AGCCATAACAGAGTGGGGCTTGGACTACGTCGTCTTGACCAGgtaaggat
acgccgactctccatttcttttcacgacaccaccccacctccatgtctac
aaaaccaaccattgtctttcattgcaattgtcatcctcacagCGTGGATC
GGGACGACTTGGAAGACCAAGGTTCAGAGCATTTCGCCCAAACCGTTCGA
GGGCTCAAGACCCGCAAGCCCTCGCTGCTCGTGGAATGCCTGACACCTGA
TTTTCGCGGCCAAGCTAATCTCATCGAGCATGTGGCCACCTCGGGCCTGG
ACGTATATGCACACAACCTTGAGACGGTGGAGCGGATGCAGCGCCGCGTG
CGGGACCACCGGGCAGGCTACTCCCAATCACTCTTCGTTCTGGAGCACGC
CAAGAAGTGTGAGCCGACCCTCTTGACCAAAACCTCGCTCATGCTCGGCG
TGGGGGAACGGCCCGAGGACATCCGTGCCACTCTGCGAGATCTGAGGACA
GCAGGCGTGGACGTCGTCACCTTCGGACAGTACCTGCGGCCTACCAAGCG
ACACATGCCTGTTAAAGCTTTCGTCACACCGGAGCGATTCCAGGAGTGGC
AGGTGGAGGCGGAGGGGCTGGGGTTCAAGTATGTCGCCTCGGGACCGCTC
GTCCGCTCTTCCTACAAAGCGGGGGAGTTTTTTTTGAAGGGGCTTCTCAA
GAAGCAAGAAGAAAGATGAAGACGGCGCCCTCCCAGAAGAGGAGCAGTGG
CAAAAGGAGCAGGAGCGTGTTGGCAAAATGTAAACAAATCAAGACTACGA
AATAAGGAATCATAGGTGACATACAAAAACACAACCACACGGTGTATCAT

protein sequence of NO05G02260.1

>NO05G02260.1-protein ID=NO05G02260.1-protein|Name=NO05G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MRAVARHAPCRSLPYGQILTRPAPAAATLPEAALPRSCKARGLASYSSAR
LENLRKQLEEEDAAGIAMSLIPPTIHVPETVSSDDVAPAPRRQKRMEPKP
SWLKAVPAEGENYLRLKSTVRKLKLATVCEEARCPNIGECWGGGKEGTAT
ATIMIMGDTCTRGCSFCAVKTSRTPAALDPLEPEHVAQAITEWGLDYVVL
TSVDRDDLEDQGSEHFAQTVRGLKTRKPSLLVECLTPDFRGQANLIEHVA
TSGLDVYAHNLETVERMQRRVRDHRAGYSQSLFVLEHAKKCEPTLLTKTS
LMLGVGERPEDIRATLRDLRTAGVDVVTFGQYLRPTKRHMPVKAFVTPER
FQEWQVEAEGLGFKYVASGPLVRSSYKAGEFFLKGLLKKQEER*

Synonyms

Publications