NO05G01910, NO05G01910 (gene) Nannochloropsis oceanica

Overview
NameNO05G01910
Unique NameNO05G01910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1180
Alignment locationchr5:522448..523627 -

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Properties
Property NameValue
DescriptionAlkylated dna repair protein alkb-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:522448..523627 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR027450AlkB-like
Homology
BLAST of NO05G01910 vs. NCBI_GenBank
Match: EWM28175.1 (alkylated dna repair protein alkb-like protein [Nannochloropsis gaditana])

HSP 1 Score: 402.5 bits (1033), Expect = 1.300e-108
Identity = 206/347 (59.37%), Postives = 251/347 (72.33%), Query Frame = 0
Query:    1 MPYCPSPQPSNTLCLLGVGAG----QQQPLETCLRSLFPT---ATAVDVKTTKSFVCFATQQTAEDVLKQWQKQILPLGLSQHPVKITFGRFYEAKSNPQPEDVQADPITGAPFPDAHLPPGLQILPFLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVARGRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            MPYCPS Q S+TLC LGVG       +   ET  RSLF T     AV +   K+++ F + +TAE V ++WQ ++LP  LS+HPV + FGR YEAK NP+PE+V  DP+     P   LP GLQ+  FL+EAEE++LL L+DS +WD   V RRTQHYGAAAIDF+++ L    P  PIP  C+ LL R R+QQ+A GV+W SGPLA  +  C  RDQMTVNEY+PG GIA HID HSLFEDG LI+SLGSA VMDFR+QR     + L++GE   RCSLLLPRRSLLVLQGEARY W+HGLASRKTDKVNG+LV+RGRRVSLSFRR+R G+P +C+C FP +CD R
Sbjct:    1 MPYCPSVQSSDTLCFLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRH----NDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKR 343          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_005856367.1 (2og-fe oxygenase, partial [Nannochloropsis gaditana CCMP526] >EKU19994.1 2og-fe oxygenase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 378.6 bits (971), Expect = 2.100e-101
Identity = 191/317 (60.25%), Postives = 234/317 (73.82%), Query Frame = 0
Query:   27 ETCLRSLFPT---ATAVDVKTTKSFVCFATQQTAEDVLKQWQKQILPLGLSQHPVKITFGRFYEAKSNPQPEDVQADPITGAPFPDAHLPPGLQILPFLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVARGRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            ET  RSLF T     AV +   K+++ F + +TAE V ++WQ ++LP  LS+HPV + FGR YEAK NP+PE+V  DP+     P   LP GLQ+  FL+EAEE++LL L+DS +WD   V RRTQHYGAAAIDF+++ L    P  PIP  C+ LL R R+QQ+A GV+W SGPLA  +  C  RDQMTVNEY+PG GIA HID HSLFEDG LI+SLGSA VMDFR+QR     + L++GE   RCSLLLPRRSLLVLQGEARY W+HGLASRKTDKVNG+LV+RGRRVSLSFRR+R G+P +C+C FP +CD R
Sbjct:   17 ETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRH----NDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKR 329          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_024382034.1 (alkylated DNA repair protein alkB homolog 8-like [Physcomitrella patens] >PNR49730.1 hypothetical protein PHYPA_011626 [Physcomitrella patens])

HSP 1 Score: 157.1 bits (396), Expect = 9.700e-35
Identity = 104/289 (35.99%), Postives = 143/289 (49.48%), Query Frame = 0
Query:   92 PQPEDVQADPITGAPFPDAHLPPGLQILPFLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDA----------------------------------RCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVARG-RRVSLSFRRMRKGSPLVCDCSFPEACDSRAATAG 346
            PQ +    + +      D  +P       F++ +EE  LL  VD   W T+   RR QHYG   + +KTR + LS  +  +P+  + LLN+I    E          +A  E P    DQ+TVNEY  G G++ HID HS FE   L +SLG  C+M+FRK  +R  G+ L +G+                                     R +L LP RSLL+L GEARYAW H +   K D VNGQ++ RG RRVS +FR++R G+   C+C F E CDS+ + AG
Sbjct:  103 PQTQSSVEEQVVFTSSADVGVPGLTLYTDFVTLSEEQELLREVDERSWQTL-AKRRVQHYGYEFL-YKTRNVDLSQKLGELPASLEPLLNKISLVPE----------IASAEEPTLPFDQLTVNEYPRGVGLSPHIDTHSAFEGSILSLSLGGPCIMEFRKYIKR--GNSLVDGDAHTSTSISQQNDESNENAEAIVVRNDDSVPTGSVYIIRKALFLPPRSLLILSGEARYAWHHYIPHHKIDNVNGQVLDRGTRRVSFTFRKVRPGA---CNCPFIEHCDSQVSDAG 374          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_004341494.1 (methyltransferase domain containing protein [Acanthamoeba castellanii str. Neff] >ELR19408.1 methyltransferase domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 156.0 bits (393), Expect = 2.200e-34
Identity = 101/263 (38.40%), Postives = 139/263 (52.85%), Query Frame = 0
Query:   86 YEAKSNPQPEDVQADPITGAPFPDAHLPPGLQIL-PFLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNR------IRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVAR-GRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            +E     Q E  QA+ +      +     GL +   F+ E EE  LLA V    W+T+   RR QH+G    D+KTR + ++ P+  +P     ++ R      + ++ EA G       + +  +P  E DQ+TVNEYE G GI  HID HS F DG + +SLGS+CVM             L   +     S+ LPRRSLLV+ G ARY W H +  R+ D V+GQL+ R G+RVS +FRR+R G P  CDC F E CDS+
Sbjct:  139 FEYAELKQSEKAQAEDVALTQHVEVE---GLYVFYDFIDETEEQRLLAAVKDKSWNTLP-RRRVQHWG-YEFDYKTRNIDITKPLGGLPDFVSEVVKRMNDAAVVEEEDEATGTK-----VQRRRWP--ESDQLTVNEYEEGVGIGAHIDTHSAFHDGIISLSLGSSCVMT------------LSLPDSSQHKSVFLPRRSLLVMTGAARYQWRHAIPFRRYDCVHGQLIKREGKRVSFTFRRVR-GHP--CDCRFAEECDSQ 374          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: GAQ85696.1 (hypothetical protein KFL_002490140 [Klebsormidium nitens])

HSP 1 Score: 155.2 bits (391), Expect = 3.700e-34
Identity = 99/257 (38.52%), Postives = 141/257 (54.86%), Query Frame = 0
Query:  103 TGAPFPDAHLP------PGLQILP-FLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQ-----QEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQ-RRRQAGDG-----LEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVARG-RRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            TG P P+  +       PGL  +P F+SE EE  L+A VD   W  +   RR QHYG     +++R +  +A +   P   Q++  R+ +      ++      ++G    E       DQ+TVNEY  G G++ H+D HS F    + +SL    VM+FR+Q +  QA DG       +G ++ RC  L P RSLLVL GEARYAW H +  RK+D V G++V RG RRVSL+FR++R G    C C +PE+CDS+
Sbjct:  105 TGPPLPEVCVSGEQVGIPGLVCIPDFVSEEEERELVAAVDDGNWHRL-AKRRVQHYG-YEFKYQSRNVDPTAELGAFPPPLQSVSQRVERLLTGECEQVCSEDDATGGKQTEAEQSWPLDQLTVNEYPAGVGLSPHVDTHSAFHGAIVSLSLAGPTVMEFRRQCQEAQAPDGSSSTDTTDGLLERRCLFLAP-RSLLVLTGEARYAWQHYIPHRKSDLVRGEIVLRGRRRVSLTFRKVRTGP---CRCEYPESCDSQ 355          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_002776895.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER08711.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983])

HSP 1 Score: 154.1 bits (388), Expect = 8.300e-34
Identity = 100/240 (41.67%), Postives = 138/240 (57.50%), Query Frame = 0
Query:  106 PFPDAHLPPGLQILP-FLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKT--RKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKV--NGQLVARGRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            P     LPPGL ++P F++E EE  LL LVD+ EWD   + RR QH+G  A D+ +   K       A +P+  + L+ RIR +  A          A++  P    DQ+T+NEY PG GI+ H+D HS FE   +I+S+G   V++FRK          EEG       L LPRRSL V+ GE+R+ W HG+A RKTD+V  +G LV R RR+SL+FR+M K SP  C+C +   CD++
Sbjct:   99 PTTTDELPPGLTLIPDFITEEEEEKLLGLVDAGEWDH-SIRRRVQHFG-HAFDYTSLRAKDAFLDGEARMPAYTEELVRRIRAESVA---------EARDFRP----DQLTINEYIPGVGISFHVDTHSAFEGPIVILSIGGGIVLEFRKS---------EEGRA---LPLWLPRRSLAVMGGESRFGWVHGIAGRKTDRVGPDGDLVERQRRISLTFRQM-KNSP--CECEWAALCDTQ 308          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: CBN75873.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 154.1 bits (388), Expect = 8.300e-34
Identity = 94/237 (39.66%), Postives = 130/237 (54.85%), Query Frame = 0
Query:  114 PGLQILP-FLSEAEEAALL---ALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVARGRRVSLSFRRMRKGSPLVCDCSFPEACDSRAATAGA 347
            PGL ++  F++E EE +LL      D   W T  + RR QH+G    D+ TR +   AP  P+P   + L + +R+             +       ++ DQ+T+NEY+PG GI+ H+D HS FEDG   +SLGS CVMD R        DG+         +L LPR SLLV++G ARY WSHG+ASRKTD V+G L  R  R+S +FRR+R  + + C C F ++CD     A A
Sbjct:  139 PGLTLIKGFVTEEEEGSLLKHFVQGDDVRW-TGPLKRRVQHFG-RVFDYHTRHVDFDAPAPPLP---ECLTDVVRE-------------MGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHP------DGVRVK------NLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRATRISFTFRRVRDPA-VACGCDFAKSCDRETPVATA 344          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_015963138.1 (alkylated DNA repair protein alkB homolog 8 isoform X2 [Arachis duranensis])

HSP 1 Score: 153.3 bits (386), Expect = 1.400e-33
Identity = 114/321 (35.51%), Postives = 160/321 (49.84%), Query Frame = 0
Query:   39 AVDVKTTKSFVCFATQQTAEDVLKQWQKQILPLGLSQHPVKITFGRFYEAKSN---PQPEDVQADPITGAPFPDAHLPPGLQIL-PFLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAER---DQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRR-----RQAGDGLEEG---EVDA---RCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVAR-GRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            A D   T+  V F+ + +A+   K          L   P     GR    + +   P P+D  +D +  +        PGL ++  F+S  EE  LL  VDS  W+++   RR QHYG     +  R +     +  +PS    +L RI           SS P     F  AE    DQ+TVNEY PG G++ HID HS FED    +SL   C+M+FRK        + A   + EG   E D+   R ++ LP RSLL+L GEARYAW+H +   K DKVNG+++ R  RRVS +FR++R G+   C+C FP+ CDS+
Sbjct:   50 AADESGTRVIVSFSEEGSAQSAFK---------ALDGTPCPELGGRSLHIRYSVIQPTPKDEVSDMVPVSINASELSIPGLYLVHNFISAKEEEELLQAVDSRPWNSL-AKRRVQHYG-YEFRYDIRNVNTRHCLGELPSFVSPILERI-----------SSCP----TFKSAEHIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRKYENGDWHTKVASSAVSEGGSPEDDSNFLRKAIYLPPRSLLLLSGEARYAWNHYIPHHKIDKVNGRVIRRASRRVSFTFRKVRTGA---CECEFPQYCDSQ 341          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_002680685.1 (predicted protein [Naegleria gruberi] >EFC47941.1 predicted protein, partial [Naegleria gruberi])

HSP 1 Score: 152.9 bits (385), Expect = 1.800e-33
Identity = 87/225 (38.67%), Postives = 128/225 (56.89%), Query Frame = 0
Query:  121 FLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRI-----RKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVARGRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            F++E EEA ++  V+   W  +++ RR QHYG    D+  R +  +  V PIP     ++NR+     +K++E      S   ++  +F     DQ+T+NEY+PG GI  HIDVH+ F DG  IVS+  + VM F K    +    +E+  VD      LPRRSLL+L GEARY W H +  R+ D+VNG++  R RRVSL+ R +RK    +C C + + CDS+
Sbjct:    7 FITEEEEAKIMEQVEPKNW-VIELQRRVQHYG-FKFDYDIRSIDFNTQVEPIPEYTTNIMNRMKEAMKKKKEENDSTIMSDEFISTFDFETYNPDQLTINEYQPGQGIRPHIDVHTPFNDGLFIVSMLGSAVMYFSKCVGEEV---VEKKYVD------LPRRSLLILVGEARYLWRHAIMCRELDRVNGKIRKRQRRVSLTIRSVRKEG--LCTCKYTDVCDSQ 218          
BLAST of NO05G01910 vs. NCBI_GenBank
Match: XP_003534335.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X2 [Glycine max] >KRH39749.1 hypothetical protein GLYMA_09G217100 [Glycine max] >KRH39750.1 hypothetical protein GLYMA_09G217100 [Glycine max] >KRH39751.1 hypothetical protein GLYMA_09G217100 [Glycine max] >KRH39752.1 hypothetical protein GLYMA_09G217100 [Glycine max] >KRH39753.1 hypothetical protein GLYMA_09G217100 [Glycine max] >KRH39754.1 hypothetical protein GLYMA_09G217100 [Glycine max])

HSP 1 Score: 150.2 bits (378), Expect = 1.200e-32
Identity = 110/318 (34.59%), Postives = 154/318 (48.43%), Query Frame = 0
Query:   39 AVDVKTTKSFVCFATQQTAEDVLKQWQKQILPLGLSQHPVKITFGRFYEAKSNPQPEDVQADPI-TGAPFPDAHLPPGLQILPFLSEAEEAALLALVDSAEWDTVQVFRRTQHYGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLAKEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDFRKQRRRQAGDGL--------------EEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKTDKVNGQLVAR-GRRVSLSFRRMRKGSPLVCDCSFPEACDSR 341
            A D   T+  V +  + +A+  LK    Q  P  L    + I +     +   P P+D  +D +       D  +P    +  F+S  EE  LL  VD   W+++   RR QHYG     +  R +     +  +PS    +L+RI           SS P   E       DQ+TVNEY PG G++ HID HS FED    +SL   C+M+F   RR + GD L              E+     R ++ LP RSLL+L GEARYAW H +   K DKVNG+++ R  RRVS +FR++R+G   +C C FP+ CDSR
Sbjct:   50 AADESGTRVIVAYVEEGSAQAALKALHGQSCP-ELGGRSLHIRY-----SVLQPTPQDQASDLVPVSITASDVSIPGLFLVHDFISAKEEEELLQAVDCRPWNSLSK-RRVQHYG-YEFRYDIRNVNTRHCLGELPSFVSPILDRI-----------SSCP-TFENVKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEF---RRYENGDWLPRVASSAVAKIENPEDQSNFIRRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGKVIRRASRRVSFTFRKVREG---LCKCEFPQYCDSR 341          
The following BLAST results are available for this feature:
BLAST of NO05G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28175.11.300e-10859.37alkylated dna repair protein alkb-like protein [Na... [more]
XP_005856367.12.100e-10160.252og-fe oxygenase, partial [Nannochloropsis gaditan... [more]
XP_024382034.19.700e-3535.99alkylated DNA repair protein alkB homolog 8-like [... [more]
XP_004341494.12.200e-3438.40methyltransferase domain containing protein [Acant... [more]
GAQ85696.13.700e-3438.52hypothetical protein KFL_002490140 [Klebsormidium ... [more]
XP_002776895.18.300e-3441.67conserved hypothetical protein [Perkinsus marinus ... [more]
CBN75873.18.300e-3439.66conserved unknown protein [Ectocarpus siliculosus][more]
XP_015963138.11.400e-3335.51alkylated DNA repair protein alkB homolog 8 isofor... [more]
XP_002680685.11.800e-3338.67predicted protein [Naegleria gruberi] >EFC47941.1 ... [more]
XP_003534335.11.200e-3234.59PREDICTED: alkylated DNA repair protein alkB homol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003678NSK003678Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01910.1NO05G01910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100004g116gene2367Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01910.1NO05G01910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01910 ID=NO05G01910|Name=NO05G01910|organism=Nannochloropsis oceanica|type=gene|length=1180bp
AACCACAGGCGTAGAGGATGCCATATTGTCCATCTCCGCAGCCCTCTAAC
ACGCTTTGCCTCTTGGGCGTGGGTGCGGGTCAACAACAGCCTTTAGAGAC
CTGTCTCCGCTCCCTCTTTCCAACCGCAACGGCCGTCGACGTGAAAACTA
CCAAGAGCTTTGTCTGCTTTGCGACTCAGCAGACTGCTGAAGATGTCCTG
AAACAATGGCAGAAACAGATACTTCCACTTGGGCTTTCGCAGCACCCAGT
TAAAATCACGTTCGGACGATTTTACGAGGCTAAGTCTAATCCACAGCCGG
AAGACGTGCAAGCGGACCCTATCACAGGTGCCCCTTTCCCCGATGCCCAC
CTCCCACCCGGCCTGCAAATACTCCCATTTTTATCCGAAGCAGAGGAGGC
GGCACTCCTAGCTCTAGTAGATAGCGCGGAATGGGATACCGTCCAAGTCT
TTCGAAGGACGCAGCACTATGGTGCAGCGGCCATTGATTTCAAAACCCGG
AAACTTGGGCTGTCTGCGCCCGTCGCTCCCATTCCTTCTATATGCCAAGC
CTTACTTAATCGTATTCGAAAGCAACAGGAGGCATTGGGTGTGTCCTGGT
CGAGTGGACCGTTGGCAAAGGAGGAGTTTCCTTGTGCGGAGAGAGATCAG
ATGACAGTGAATGAATATGAGCCGGGATCGGGCATAGCTAATCATATCGA
TGTGCACTCGCTATTCGAGGACGGCTTTTTGATTGTATCTTTGGGGAGTG
CTTGTGTTATGGATTTTAGGAAGCAAAGAAGGAGACAGGCCGGTGATGGA
CTGGAAGAGGGAGAAGTGGATGCACGCTGCTCTCTACTGCTGCCACGAAG
GTCTTTGCTTGTGCTGCAGGGAGAGGCCCGGTACGCATGGAGTCATGGAT
TGGCGAGTCGGAAAACAGACAAGGTAAATGGTCAGCTCGTCGCGCGGGGC
CGCCGCGTCTCACTTAGTTTTCGGAGGATGCGTAAGGGAAGCCCGCTAGT
GTGTGATTGTTCTTTCCCCGAGGCCTGCGATAGTCGGGCGGCCACTGCTG
GGGCCTGTGGCAGCTATACCAATTGAGAGAGGGGACTTGGATCGCACGCG
TGAGATAGTGTACAGAGAAATATATTCACGGAATGGCTGAATTGAGACGA
GGACGACGAGTGACAGAAGCAAAGACGACA
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protein sequence of NO05G01910.1

>NO05G01910.1-protein ID=NO05G01910.1-protein|Name=NO05G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MPYCPSPQPSNTLCLLGVGAGQQQPLETCLRSLFPTATAVDVKTTKSFVC
FATQQTAEDVLKQWQKQILPLGLSQHPVKITFGRFYEAKSNPQPEDVQAD
PITGAPFPDAHLPPGLQILPFLSEAEEAALLALVDSAEWDTVQVFRRTQH
YGAAAIDFKTRKLGLSAPVAPIPSICQALLNRIRKQQEALGVSWSSGPLA
KEEFPCAERDQMTVNEYEPGSGIANHIDVHSLFEDGFLIVSLGSACVMDF
RKQRRRQAGDGLEEGEVDARCSLLLPRRSLLVLQGEARYAWSHGLASRKT
DKVNGQLVARGRRVSLSFRRMRKGSPLVCDCSFPEACDSRAATAGACGSY
TN*
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Synonyms
Publications