NO05G01870, NO05G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_011582575.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X4 [Aquila chrysaetos canadensis]) HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9 Identity = 89/370 (24.05%), Postives = 157/370 (42.43%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 +F++ME +++KLK+L + A R + P + Q +F T+A+WL + + + A++++ LS L+ G + LK GYG+ VC +LD L AL GF W+ P Y P+EE TLNK EE A E + + + L+ + + AK+ + S + W+ ++ LK +++K+ R V Q+ + E++ + +G +D L E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 37 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKL--EEDVAEEESDNEEDFIDLSVLKAQTYRSDMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 399
BLAST of NO05G01870 vs. NCBI_GenBank
Match: OXB71867.1 (hypothetical protein H355_011228 [Colinus virginianus]) HSP 1 Score: 72.0 bits (175), Expect = 4.600e-9 Identity = 85/343 (24.78%), Postives = 146/343 (42.57%), Query Frame = 0 Query: 40 FLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAE---SEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQREEEEALRWEHPSGEEGSTWQTGGGSGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 F++ME +++K+K+L + A R + P + Q +F T+A+WL + + + A+++ LS L+ G + LK G G+ C +LD L AL GF W+ PVY P++E TLNK E +EE + E ++L T + + K + K E +S + D AE W+ ++ LK +++K+ R + HQ K G +LK R+ + +++++E EE G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 22 FVLMEELLDKMKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGRHFEQPQEYDDPNAVISKILSELRSLGRPVDFPPSKLKAGCGEQACYVLDCLAEEALKYSGFSWKRPVY-PTDELEEEEITEDDKELTLNKLEEDVAEEESDNEEDFIDLNVLKAQTYRSDVKDSTKQEEILQS----TTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI------------HVDQMHQHKDGIESSLKET--RITELLEKVKQETEEK------------------------GSSMTDGTPLVRIKQALTKLKQETVQMDIQIGVMEHTLL 318
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_002192561.1 (PREDICTED: intraflagellar transport protein 57 homolog [Taeniopygia guttata]) HSP 1 Score: 71.2 bits (173), Expect = 7.900e-9 Identity = 84/367 (22.89%), Postives = 156/367 (42.51%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---VPSEETLNKAES-------EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 +F++ME +++KLK+L + A RP + P + Q +F T+A+WL ++ + + A+++ LS L+ G + LK G G+ VC +LD L AL GF W+ P Y P EE + + ++ EE A E + + L+ + + + AK+ + S + W+ ++ LK +++K+ R V Q+ + +++ + +G +D L E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 29 MFVLMEDLLDKLKLLSYEEEALRPHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGRPFEQPQEYDDPNAVISSVLSELRSFGRPVDFPPSKLKTGCGEQVCYVLDCLAEEALKNTGFSWKRPAYPTEEPEEEEITEDDAELTLSKLEEDVAEEESDNEEDYIDLNVLKAQTYRSNMNSTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 391
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_015486427.1 (PREDICTED: intraflagellar transport protein 57 homolog [Parus major]) HSP 1 Score: 71.2 bits (173), Expect = 7.900e-9 Identity = 90/366 (24.59%), Postives = 151/366 (41.26%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGE-SDPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLP-LKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 +F++ME +++KLK+L + A R + P + Q +F T+A+WL ++ P C + LS L+ G S + LK G G+ VC +LD L AL GF W+ PVY P+EE TLNK E + A + L+ Q + T+ +E T+ + LP LK +++K+ R V Q+ + +++ + +G +D L E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 31 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGHPFEQPQECDDPNAVISNVLSELRSFGRSVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFTWKRPVY-PTEEPEEEEITEDDAELTLNKLEEDVAEEESDNEEDYIDLNVLKAQTYRSNMSDTTKQEEILQSTTDAAEWNLEVERVLPQLKVIVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 393
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_005038841.1 (PREDICTED: intraflagellar transport protein 57 homolog [Ficedula albicollis]) HSP 1 Score: 69.7 bits (169), Expect = 2.300e-8 Identity = 84/367 (22.89%), Postives = 154/367 (41.96%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRL-KGESDPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---VPSEETLNKAES-------EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 +F++ME +++KLK+L + A R + P + Q +F T+A+WL ++ + P C + + LS L+ G + LK G G+ VC +LD L AL GF W+ P Y P EE + + ++ EE A E + + + L+ + + AK+ + S + W+ ++ LK +++K+ R V Q+ + +++ + +G +D L E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 29 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGRPFEQPQECDDPNAVISSVLSQLRSFGRPVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFSWKRPAYPTEEPEEEEITEDDAELTLSRLEEDVAEEESDNEENYIDLNVLKAQTYRSNMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 391
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_005425674.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Geospiza fortis]) HSP 1 Score: 68.9 bits (167), Expect = 3.900e-8 Identity = 84/367 (22.89%), Postives = 157/367 (42.78%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---VPSEETLNKAES-------EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 +F++ME +++KLK+L + A R + P + Q +F T+A+WL ++ + + A++++ LS L+ G + LK G G+ VC +LD L AL GF W+ P Y P EE + + ++ EE A E + + + L+ + + AK+ + S + W+ ++ LK +++K+ R V Q+ + +++ + +G +D L E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +EI D++IGVM+H LL Sbjct: 31 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGHPFEQPQEYDDPNAVISNVLSKLRSFGRPVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFNWKRPAYPTEEPEEEEITEDDAELTLSKLEEDVAEEESDNEENYIDLNVLKAQTYRSNMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQEIIQMDIQIGVMEHTLL 393
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_416624.4 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Gallus gallus]) HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8 Identity = 90/370 (24.32%), Postives = 156/370 (42.16%), Query Frame = 0 Query: 40 FLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEA-KLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 F++ME +++KLK+L + A R + P + Q +F T+A+WL + + + A+++ LS L+ G LK GYG+ C +LD L AL GF W+ PVY P++E TLNK EE A E + + + L+ + + K T +E ++ D AE W+ ++ LK +++K+ R V Q+ + E++ + +G +D E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 144 FVLMEELLDKLKLLSYEEEALRRHNVRPLSRHYFALPTNPGEQFFVFCTLAAWLITKAGHHFEQPQEYDDPNAIISKILSELRSFGRPVDFPPTKLKAGYGEQACYVLDCLAEEALKCSGFSWKRPVY-PTDELEEEEITEDDTELTLNKL--EEDVAEEESDNEENFIDLNVLKAQTYRSDVKDTTKQEEILQSTTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKFHNEISRTLEKINSREKYINNQLEHLIQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLEKVKQETEEKGSSMTDGTPLVRIKQALTKLKQETIQMDIQIGVMEHTLL 505
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_005524032.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Pseudopodoces humilis]) HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8 Identity = 88/366 (24.04%), Postives = 150/366 (40.98%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGE-SDPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLP-LKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360 +F++ME +++KLK+L + A R + P + Q +F T+A+WL ++ P C + LS L+ G S + LK G G+ VC +LD L AL GF W+ P Y P+EE TL+K E + A + L+ Q + T+ +E T+ + LP LK +++K+ R V Q+ + +++ + +G +D L E R ++ + ++ + E L E+ S E +Q G G + G M +P+V +++ L K+ +E D++IGVM+H LL Sbjct: 31 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGHPFEQPQECDDPNAVISNVLSELRSFGRSVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFTWKRPAY-PTEEPEEEEITEDDAELTLSKLEEDVAEEESDNEEDYIDLNILKAQTYRSNMSDTTKQEEILQSTTDAAEWNLEVERVLPQLKVIVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 393
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_002716765.1 (PREDICTED: intraflagellar transport protein 57 homolog [Oryctolagus cuniculus]) HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8 Identity = 72/264 (27.27%), Postives = 122/264 (46.21%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDLKGAG-RPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---------VPSEE---TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEA-KLAAKLTEAKESKSCTSPDVAE-GKSWDPKLP-LKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDR 286 +FL+ME +VEKLK+L + R + PP + Q +F T+A+WL N+ + + A +++ L+ L+ G + + LK GYG+ VC +LD L AAL IGF W+ P Y VP ++ TLNK + E E + + + L+ + +L + +E+ ++ D AE + LP LK +++K+ R V Q+ + E+A + +G +D L E R ++ Sbjct: 40 MFLVMEDLVEKLKLLRYEEEFLRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLLNKAGHPFEQPQEYDDPNATISNILAELRSLGRAADFPPSKLKSGYGEHVCYVLDCLAEAALKYIGFTWKRPAYPVEELEEETVPEDDAELTLNKVDEE--FVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEAILESTTDAAEWSLEVERVLPQLKVTIRTDNKDWRI--HVDQMHQHRSGIESALKETKGFLDKLHNEISRTLEK 299
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_021524739.1 (LOW QUALITY PROTEIN: intraflagellar transport protein 57 homolog [Aotus nancymaae]) HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8 Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0 Query: 39 LFLMMESIVEKLKVLDLKGAG-RPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEETLNKAESEEAA 182 +F++ME +VEKLK+L + R + P + Q +F T+A+WL N+ + + A +++ LS L+ G + + LK G G+ VC +LD L AL IGF W+ PVY P EE ++ +E+ A Sbjct: 40 MFVVMEDLVEKLKLLRFEEEFLRKSNLKAPSRHYFALPTNPGEQFYMFSTLAAWLINKAGHPFEQPQEYDDPNATISNILSELRSFGRTADFPPSKLKSGCGEHVCYVLDCLAEEALKYIGFTWKRPVY-PVEELEEESVAEDDA 183 The following BLAST results are available for this feature:
BLAST of NO05G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01870 ID=NO05G01870|Name=NO05G01870|organism=Nannochloropsis oceanica|type=gene|length=1316bpback to top protein sequence of NO05G01870.1 >NO05G01870.1-protein ID=NO05G01870.1-protein|Name=NO05G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bpback to top Synonyms
Publications
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