NO05G01870, NO05G01870 (gene) Nannochloropsis oceanica

Overview
NameNO05G01870
Unique NameNO05G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1316
Alignment locationchr5:512792..514107 -

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Properties
Property NameValue
DescriptionIntraflagellar transport protein 57 homolog
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:512792..514107 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019530Intra-flagellar_transport_57
Homology
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_011582575.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X4 [Aquila chrysaetos canadensis])

HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9
Identity = 89/370 (24.05%), Postives = 157/370 (42.43%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK   EE  A  E +     +  + L+ +   +     AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   37 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKL--EEDVAEEESDNEEDFIDLSVLKAQTYRSDMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 399          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: OXB71867.1 (hypothetical protein H355_011228 [Colinus virginianus])

HSP 1 Score: 72.0 bits (175), Expect = 4.600e-9
Identity = 85/343 (24.78%), Postives = 146/343 (42.57%), Query Frame = 0
Query:   40 FLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAE---SEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQREEEEALRWEHPSGEEGSTWQTGGGSGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            F++ME +++K+K+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A+++  LS L+  G       + LK G G+  C +LD L   AL   GF W+ PVY P++E             TLNK E   +EE +   E     ++L   T + + K + K  E  +S    + D AE   W+ ++      LK    +++K+ R               +  HQ K G   +LK    R+ +  +++++E EE                         G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   22 FVLMEELLDKMKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGRHFEQPQEYDDPNAVISKILSELRSLGRPVDFPPSKLKAGCGEQACYVLDCLAEEALKYSGFSWKRPVY-PTDELEEEEITEDDKELTLNKLEEDVAEEESDNEEDFIDLNVLKAQTYRSDVKDSTKQEEILQS----TTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI------------HVDQMHQHKDGIESSLKET--RITELLEKVKQETEEK------------------------GSSMTDGTPLVRIKQALTKLKQETVQMDIQIGVMEHTLL 318          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_002192561.1 (PREDICTED: intraflagellar transport protein 57 homolog [Taeniopygia guttata])

HSP 1 Score: 71.2 bits (173), Expect = 7.900e-9
Identity = 84/367 (22.89%), Postives = 156/367 (42.51%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---VPSEETLNKAES-------EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A RP +  P      +       Q  +F T+A+WL ++     +    +    A+++  LS L+  G       + LK G G+ VC +LD L   AL   GF W+ P Y    P EE + + ++       EE  A  E +     +    L+ +   +   + AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  +++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   29 MFVLMEDLLDKLKLLSYEEEALRPHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGRPFEQPQEYDDPNAVISSVLSELRSFGRPVDFPPSKLKTGCGEQVCYVLDCLAEEALKNTGFSWKRPAYPTEEPEEEEITEDDAELTLSKLEEDVAEEESDNEEDYIDLNVLKAQTYRSNMNSTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 391          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_015486427.1 (PREDICTED: intraflagellar transport protein 57 homolog [Parus major])

HSP 1 Score: 71.2 bits (173), Expect = 7.900e-9
Identity = 90/366 (24.59%), Postives = 151/366 (41.26%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGE-SDPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLP-LKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL ++       P  C      +   LS L+  G S     + LK G G+ VC +LD L   AL   GF W+ PVY P+EE             TLNK E + A    +       L+    Q      +  T+ +E    T+         +  LP LK    +++K+ R    V Q+    +  +++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   31 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGHPFEQPQECDDPNAVISNVLSELRSFGRSVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFTWKRPVY-PTEEPEEEEITEDDAELTLNKLEEDVAEEESDNEEDYIDLNVLKAQTYRSNMSDTTKQEEILQSTTDAAEWNLEVERVLPQLKVIVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 393          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_005038841.1 (PREDICTED: intraflagellar transport protein 57 homolog [Ficedula albicollis])

HSP 1 Score: 69.7 bits (169), Expect = 2.300e-8
Identity = 84/367 (22.89%), Postives = 154/367 (41.96%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRL-KGESDPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---VPSEETLNKAES-------EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL ++  +    P  C      + + LS L+  G       + LK G G+ VC +LD L   AL   GF W+ P Y    P EE + + ++       EE  A  E +   + +    L+ +   +     AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  +++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   29 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGRPFEQPQECDDPNAVISSVLSQLRSFGRPVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFSWKRPAYPTEEPEEEEITEDDAELTLSRLEEDVAEEESDNEENYIDLNVLKAQTYRSNMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 391          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_005425674.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Geospiza fortis])

HSP 1 Score: 68.9 bits (167), Expect = 3.900e-8
Identity = 84/367 (22.89%), Postives = 157/367 (42.78%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---VPSEETLNKAES-------EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL ++     +    +    A++++ LS L+  G       + LK G G+ VC +LD L   AL   GF W+ P Y    P EE + + ++       EE  A  E +   + +    L+ +   +     AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  +++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +EI   D++IGVM+H LL
Sbjct:   31 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGHPFEQPQEYDDPNAVISNVLSKLRSFGRPVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFNWKRPAYPTEEPEEEEITEDDAELTLSKLEEDVAEEESDNEENYIDLNVLKAQTYRSNMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQEIIQMDIQIGVMEHTLL 393          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_416624.4 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Gallus gallus])

HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8
Identity = 90/370 (24.32%), Postives = 156/370 (42.16%), Query Frame = 0
Query:   40 FLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEA-KLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A+++  LS L+  G         LK GYG+  C +LD L   AL   GF W+ PVY P++E             TLNK   EE  A  E +   + +    L+ +  +   K T  +E    ++ D AE   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D    E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:  144 FVLMEELLDKLKLLSYEEEALRRHNVRPLSRHYFALPTNPGEQFFVFCTLAAWLITKAGHHFEQPQEYDDPNAIISKILSELRSFGRPVDFPPTKLKAGYGEQACYVLDCLAEEALKCSGFSWKRPVY-PTDELEEEEITEDDTELTLNKL--EEDVAEEESDNEENFIDLNVLKAQTYRSDVKDTTKQEEILQSTTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKFHNEISRTLEKINSREKYINNQLEHLIQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLEKVKQETEEKGSSMTDGTPLVRIKQALTKLKQETIQMDIQIGVMEHTLL 505          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_005524032.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Pseudopodoces humilis])

HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8
Identity = 88/366 (24.04%), Postives = 150/366 (40.98%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGE-SDPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLP-LKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL ++       P  C      +   LS L+  G S     + LK G G+ VC +LD L   AL   GF W+ P Y P+EE             TL+K E + A    +       L+    Q      +  T+ +E    T+         +  LP LK    +++K+ R    V Q+    +  +++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   31 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLISKAGHPFEQPQECDDPNAVISNVLSELRSFGRSVDFPPSKLKTGCGEQVCYVLDCLAEEALKHTGFTWKRPAY-PTEEPEEEEITEDDAELTLSKLEEDVAEEESDNEEDYIDLNILKAQTYRSNMSDTTKQEEILQSTTDAAEWNLEVERVLPQLKVIVRTDNKDWRI--HVDQMHQHKDGIDSSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEALEKVKQETEEKGSSMTDGAPLVKIKQALTKLRQETIQMDIQIGVMEHTLL 393          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_002716765.1 (PREDICTED: intraflagellar transport protein 57 homolog [Oryctolagus cuniculus])

HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8
Identity = 72/264 (27.27%), Postives = 122/264 (46.21%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDLKGAG-RPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---------VPSEE---TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEA-KLAAKLTEAKESKSCTSPDVAE-GKSWDPKLP-LKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDR 286
            +FL+ME +VEKLK+L  +    R  +  PP     +       Q  +F T+A+WL N+     +    +    A +++ L+ L+  G +     + LK GYG+ VC +LD L  AAL  IGF W+ P Y         VP ++   TLNK + E      E +   + +    L+ +  +L    +  +E+   ++ D AE     +  LP LK    +++K+ R    V Q+    +  E+A +  +G +D L  E  R  ++
Sbjct:   40 MFLVMEDLVEKLKLLRYEEEFLRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLLNKAGHPFEQPQEYDDPNATISNILAELRSLGRAADFPPSKLKSGYGEHVCYVLDCLAEAALKYIGFTWKRPAYPVEELEEETVPEDDAELTLNKVDEE--FVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEAILESTTDAAEWSLEVERVLPQLKVTIRTDNKDWRI--HVDQMHQHRSGIESALKETKGFLDKLHNEISRTLEK 299          
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_021524739.1 (LOW QUALITY PROTEIN: intraflagellar transport protein 57 homolog [Aotus nancymaae])

HSP 1 Score: 68.2 bits (165), Expect = 6.600e-8
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   39 LFLMMESIVEKLKVLDLKGAG-RPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEETLNKAESEEAA 182
            +F++ME +VEKLK+L  +    R  +   P     +       Q  +F T+A+WL N+     +    +    A +++ LS L+  G +     + LK G G+ VC +LD L   AL  IGF W+ PVY P EE   ++ +E+ A
Sbjct:   40 MFVVMEDLVEKLKLLRFEEEFLRKSNLKAPSRHYFALPTNPGEQFYMFSTLAAWLINKAGHPFEQPQEYDDPNATISNILSELRSFGRTADFPPSKLKSGCGEHVCYVLDCLAEEALKYIGFTWKRPVY-PVEELEEESVAEDDA 183          
The following BLAST results are available for this feature:
BLAST of NO05G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_011582575.12.100e-924.05PREDICTED: intraflagellar transport protein 57 hom... [more]
OXB71867.14.600e-924.78hypothetical protein H355_011228 [Colinus virginia... [more]
XP_002192561.17.900e-922.89PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_015486427.17.900e-924.59PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_005038841.12.300e-822.89PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_005425674.13.900e-822.89PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_416624.46.600e-824.32PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_005524032.16.600e-824.04PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_002716765.16.600e-827.27PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_021524739.16.600e-831.72LOW QUALITY PROTEIN: intraflagellar transport prot... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01870.1NO05G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|664247gene_2978Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g112gene2364Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01870.1NO05G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01870 ID=NO05G01870|Name=NO05G01870|organism=Nannochloropsis oceanica|type=gene|length=1316bp
ATGTCACCGCAGCCGCTACAGCTACAGACCTCCTCTGCGTCATCGACCAC
ATCTGCTGCTGCTGATGCTGCTGCTTCTGTCCCAGCGCAAGACTGGAGAA
GAGTCGAGgtaggggtacacttgatgcagggctacgcggcaaagaaaaaa
tgtaccagtagtcgataacaataaatttaccacattacaaaaccatcagG
GAACGCTTTTTCTTATGATGGAGTCCATCGTCGAGAAGCTAAAAGTGCTC
GATTTAAAGGGTGCCGGTAGACCCCTGTCGTGTCCTCCTCCTCGCCTGGA
CAGGTTGTCCTTCGTAGTAAAGCAGCCGCGACAGCACGCGCTGTTTCTCA
CGGTAGCATCATGGCTGTGCAATCGATTGAAGGGTGAATCCGATCCTACA
CACTGCCACACCACCGTTGAGGCACTCGTCGCCGACCTCAGCAACCTGCA
GCTTTGCGGCATGTCAACGGGAGAAGAGATGGCTGCACTAAAGCTAGGAT
ACGGAAAGGACGTATGCCGATTGTTGGACATTCTTTGCAATGCTGCTCTG
GCTAAAATTGGATTTGTATGGCAAGCTCCAGTGTACGTGCCATCGGAAGA
GACTTTGAATAAGGCTGAGAGCGAGGAGGCAGCAGCAGCACCCGAAAAGA
ACGGATCCACAAGCATGTTGTCTTTCACGACTCTCCAACCAGAAGCTAAA
TTGGCAGCTAAATTGACAGAAGCCAAAGAATCCAAGAGTTGCACAAGTCC
AGATGTCGCCGAGGGCAAGAGCTGGGACCCCAAACTCCCACTGAAGCACG
ACGAGGAGAGTGAAAGCAAAGAGCAGCGGTGCAGGGAGCGAGTGGGACAA
GTCAAGGTTCAAATTAATGAAGCTGAAAACGCGCACCAGATTAAACAAGG
ACGGGTGGACACTCTCAAGATAGAGTTCGGGCGGCTCCAAGATCGATGCG
ACCGTTTGCAGCGCGAAGAAGAGGAGGCTCTCCGATGGGAACACCCATCA
GGAGAGGAAGGCTCGACGTGGCAGACAGGAGGAGGAAGTGGAGGAAAGGG
AGGAGAAAGAATGGCATATGACTCTCCAATGGTAATGATGAGACGAGGCT
TGGAAAAGGTGAATGAAGAAATTAAGGCATTTGACGTACGAATAGGGGTG
ATGCAGCACATACTGCTGCATCGAGCTGGCCGCTTGAGGGCACTGGAGGA
GGAAGAGGAGGAGGACGAGGAGGAGGAGACAAGGAGGGGAAGAGAGAATG
AGCAGGCTATGAGGCTATATTGAGCGGGAAAAAGGAGCAAACGTCTCCAA
GCGAGTGTTTGTGCTT
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protein sequence of NO05G01870.1

>NO05G01870.1-protein ID=NO05G01870.1-protein|Name=NO05G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MSPQPLQLQTSSASSTTSAAADAAASVPAQDWRRVEGTLFLMMESIVEKL
KVLDLKGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGES
DPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCN
AALAKIGFVWQAPVYVPSEETLNKAESEEAAAAPEKNGSTSMLSFTTLQP
EAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLPLKHDEESESKEQRCRER
VGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQREEEEALRWE
HPSGEEGSTWQTGGGSGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVR
IGVMQHILLHRAGRLRALEEEEEEDEEEETRRGRENEQAMRLY*
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