NO05G01800, NO05G01800 (gene) Nannochloropsis oceanica

Overview
NameNO05G01800
Unique NameNO05G01800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3396
Alignment locationchr5:492295..495690 +

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Properties
Property NameValue
DescriptionCentrosomal protein of 120 kDa
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:492295..495690 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO05G01800 vs. NCBI_GenBank
Match: ETP46612.1 (hypothetical protein F442_07161 [Phytophthora parasitica P10297])

HSP 1 Score: 66.6 bits (161), Expect = 5.600e-7
Identity = 65/259 (25.10%), Postives = 115/259 (44.40%), Query Frame = 0 
Query:  552 VERKKLEFEDWRHRTEVEWSERLRAKEAERMSMLDRMHERRKKEQQEFWVKRRAEFERLEAXXXXXXXXXXXXXXXXXXXXXXXXXXAKKQVEECQALQRRLREEGKHQKEVEGLRNRELEGQLARMTQARKEAEAKIKEVQEDFARFRREARKATPTVLQQEVATLKGEKAELLVRIEREKGEKTQAFLEKEQYRAAAQRVARALKREQKRTNVNIRKHLDEMRLKYVVAEEGGTCRLDGERGELRDIKMTLDAVRQF 811
            +ER++  ++  +H  +++W  R    E  RM  L+    RR++E+       + E++RLE                            + + +E  +LQRRL  E  H   +                          K+V+ DF  +R++ RK   + L++E+A LKG  +EL  +   ++ E   A    E+ ++   ++A  L RE+K+    +   L+++R+KY+  EE     LDG+R ELR IK  LD ++ F
Sbjct:  969 LERERSAWKQEQHLHQLQWKRRFAEMEKVRMDELEEEWARREEERSNLLKAAQEEYQRLEQTLRKSLADLETRERRLAVTEAALQREQEAKRDEYDSLQRRLMSEQSHTLSLAKKXXXXXXXXXXXXXXXXXXXXXXXKQVEADFTEYRQQQRKLPESKLREEIAALKGNVSELEKQKMAKERECEIAEANVEKMKSQLDQMAGLLTREKKKHEARVVDELEKLRVKYIAREERYV--LDGDRDELRAIKKQLDDLKGF 1225
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BLAST of NO05G01800 vs. NCBI_GenBank
Match: KFQ52422.1 (Centrosomal protein of 120 kDa, partial [Nestor notabilis])

HSP 1 Score: 66.6 bits (161), Expect = 5.600e-7
Identity = 75/255 (29.41%), Postives = 125/255 (49.02%), Query Frame = 0 
Query:  557 LEFEDWRHRTEVEWSERLRAKEAERMSMLDRMHERRKKEQQEFWVKRRAEF----ERLEAXXXXXXXXXXXXXXXXXXXXXXXXXXA--KKQVEECQALQRRLREEGKHQKEVEGLRNRELEGQLARMTQARKEAEAKIKEVQEDFARFRREARKATPTVLQQEVATLKGEKAELLVRIEREKGEKTQAFLE-KEQYRAAAQRVARALKREQKRTNVNIRK---HLDEMRLKYVVAEEGGTCRLDGERGELRDIK 802
            LE E W+   E  +  +L+ KE   M +L    ++R++E++    K+ AE+    E+L+                           A  +++++E Q   RR REEG HQ E+E  + ++LE    R+ Q   EAE K K ++++F +++          LQ E+  L  EK EL    ER+    T++ L  K+Q+  A + +AR  +REQ+    +++K    L+ MRL+Y+ AEE    + D  R EL DI+
Sbjct:  383 LELEMWKEMQEDIFENQLKKKEMVHMQVLAEEWKKREREREALVKKKVAEYTVLEEQLQKTLRDLDKRERQLFSAESEVKVKKELQADHERKLQELQDSVRRAREEGAHQVELERSKIKQLEEDKLRLQQQLNEAENKHKILEKEFQQYKERQSSKPEVKLQSEINLLTLEKVEL----ERKLESATKSKLHYKQQWTRALKELARIKQREQENAMAHLKKXXXXLEHMRLRYLAAEEKELGKTD--RQELEDIR 631
[Close]
BLAST of NO05G01800 vs. NCBI_GenBank
Match: OWZ16313.1 (hypothetical protein PHMEG_0009908 [Phytophthora megakarya])

HSP 1 Score: 66.2 bits (160), Expect = 7.300e-7
Identity = 60/229 (26.20%), Postives = 110/229 (48.03%), Query Frame = 0 
Query:  582 MSMLDRMHERRKKEQQEFWVKRRAEFERLEAXXXXXXXXXXXXXXXXXXXXXXXXXXAKKQVEECQALQRRLREEGKHQKEVEGLRNRELEGQLARMTQARKEAEAKIKEVQEDFARFRREARKATPTVLQQEVATLKGEKAELLVRIEREKGEKTQAFLEKEQYRAAAQRVARALKREQKRTNVNIRKHLDEMRLKYVVAEEGGTCRLDGERGELRDIKMTLDAVRQF 811
            M  L+    RR++E+       + E++RLE                            + + +E ++LQRRL+ E  H   +   +    E ++A +     +AE + K+V+ DF  +R++ RK   + L++E+A LKG  +EL  +   ++ E   A    E  +   ++++  L +E+K+    +   L+++R+KY+  EE     LDG+R ELR IK  LD ++ F
Sbjct:    1 MDELEEEWARREEERSNMLKSAQEEYQRLEQTLRKSLADLETRERRLAVAEAAHQRQQEAKHDENESLQRRLKIEQTHTLSLAKKQTEAYERRIALLETQLSDAEKRTKQVEADFVEYRQQQRKLPESRLREEIAALKGSISELEKQKMAKERECEIAESNVETMKTQLEQMSSLLAQEKKKHEARVVDELEKLRVKYIAREEKYV--LDGDRDELRAIKKQLDDLKGF 227
The following BLAST results are available for this feature:
BLAST of NO05G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 13
Match NameE-valueIdentityDescription
ETP46612.15.600e-725.10hypothetical protein F442_07161 [Phytophthora para... [more]
KFQ52422.15.600e-729.41Centrosomal protein of 120 kDa, partial [Nestor no... [more]
OWZ16313.17.300e-726.20hypothetical protein PHMEG_0009908 [Phytophthora m... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003688NSK003688Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01800.1NO05G01800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|391907gene_2970Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g105gene2358Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01800.1NO05G01800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01800 ID=NO05G01800|Name=NO05G01800|organism=Nannochloropsis oceanica|type=gene|length=3396bp
ATGTCATCACGAGCATCGCCTGACGAGACAGAGGAAGAGGATTTGGAGGA
GCAGACGGCCTTCCCAATTGGACGCGGGCGGGACTACTTTCTCTTCACCG
TCGACATAGTGGGCTGGGGTGGGAACGGGGGAGGCTTGCAGCGGTTGCCT
GAGGCTGATGAGGGAGGCATGTGGCTCTCGTATGTCTTGTTCAAGTCCGT
GGCCTGTACTGACCGTGTGTATGCGCTCGAGGAAGAGGTCAAAGGTGGAA
GCGGACGGCGGAGCACGGACGTTTTTCGCTTGCGTAGTGCTGCGTGCGGG
GCAGACCTAGCGGCCTGGTTCTCGGGTCGCGATGATGCCGACACCAGCAA
TGGCAGCATCGGGGATGAGGAGAGTAATCGATGGCTGCAAATCTTTTTGT
GTGCACCCAAACGGTTCGTGGCTGTGGCGAGATTGGACTTGCATGACTTA
CTCTTCCAGGGAAGGGCACCCGAAGACATGACAGTAGACTTCTTTCCGCA
TGAATCTTTCGGGCGCTTCGAAATGGAGGAATGGGGGGAGAATGGGCCAC
TAGGTATGCCGAGTGGGGTGTGGGTAGATGTACGTGTCAGACTGGAGAGG
GATTTTGGGGAGGGATCCATAGTGGAGGGAATGGGGGAGGAGAGAGGAAG
GCAGGCACGACAGATATCCCCTCCAGCGGCCGATAAGGGCTTGTCTGGTA
TACCGCATGCTGCCTCAGCGACACATACTGTTAGAAATATAAGGGAAGGG
GAGGGGGAAGAGGAAGATGAGGAGGAGGAAGAGACGGGAGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAGAGGACTCCCTGCTGG
CCCAACAAGAGGAAGACGAGGCTCACCTCCGTCCAGCAGGCCGACGGAAT
TTCCGACTCTCAGTAGATTTGCGGGCTGTCGTTGGTTTGAGTCGAGCCCA
TCAGATTTACCTTGCGTACCATTATCCGCATCTTAAAGCTGCCGATGCAT
CACGCGCAGGAGGGAGGGAGCGAGAGACTTCGGCATTGGATCGACCTGTT
GTCTCGACGCCTGTCTGGGCTGCGGCCAGGGTGGAGACGCCGATGATGCG
TGCGTGTTGTACGTTTGATTTTCCGGGGAGTTATGAAGGGTTGGATGAGG
TAGCGGAGGGGCATCCTTTTGAAGTAAGAGTTAAGGCGAAGGATACTGGA
GGAAGAATAGGAGGAGGAGGAGTGGAAATTGGGCGGGTGATGCTTCCTCT
GCTGGAATTAATGCAGGATACCTCGGTGAGTTTCCGAAGTGTGATAAAAC
CGAGGGTATTTAAGTCGTATGATGCGTGCCGACGGTTTGATGCCCGGCAA
CGCACCTCTTCCTCTGCTGCTGCTCCTCCTCCTGTAGTAATGCGCGTGCT
CGATAGGTACTTGCCTCTCATTGACACCAGCAGCAGCGGCAGTGGTGGCG
AAGACGGGGCGTCCTTGCGAGCTGTCCTAGTGCTAGAGGACTTGGGAGCC
GCCGACCCCGTCTCACCGGCAGCAACTGAGGCACCAGCAGCATCAGCAGC
ATCAGCAGAAACAGCGGCAGTCAACATGGTCCAACAACAAGCACAACAAC
CCCACCTATCCACCCTTCCTCCCTCCTTCCCCCTTGCATTGACCCTATTG
GATGTGGAAAGGAAAAAATTGGAATTTGAGGATTGGAGGCATCGGACCGA
GGTGGAGTGGTCCGAGAGGCTACGAGCCAAAGAGGCCGAACGAATGTCGA
TGCTGGACAGGATGCATGAGAGGAGAAAGAAGGAGCAGCAGGAGTTTTGG
GTGAAGAGACGGGCAGAATTTGAGAGGTTGGAGGCGGAGCTGAAGAGGAG
GGTGGGCAAAGTGGAGGAGAGGGAGAGGACGGTGGATGGGAGGGAGGAGG
AGCTGAAAGCACGCGCGAAGAAGCAGGTGGAGGAGTGTCAGGCCTTGCAG
CGGAGGTTGAGGGAGGAGGGGAAACATCAGAAGGAGGTAGAGGGGCTGAG
GAATAGGGAGTTGGAGGGACAGCTGGCGCGCATGACGCAAGCGAGGAAGG
AGGCGGAGGCGAAGATAAAAGAGGTCCAGGAGGACTTTGCTCGCTTTCGA
CGGGAGGCACGCAAAGCGACACCAACTGTATTGCAACAGGAGGTTGCAAC
ACTCAAGGGGGAAAAAGCGGAATTACTCGTCCGAATAGAGCGTGAAAAGG
GAGAGAAAACACAGGCTTTCCTAGAAAAAGAACAGTACAGGGCCGCGGCC
CAGCGGGTAGCTCGGGCGCTGAAACGGGAGCAAAAAAGGACGAACGTCAA
TATTCGGAAACATTTGGATGAGATGCGGCTGAAATACGTGGTGGCGGAGG
AGGGAGGGACGTGTCGGCTGGATGGGGAAAGAGGCGAGCTGCGGGACATC
AAAATGACCTTGGACGCTGTGAGGCAGTTTGGGGGCATGCCGACGGGGGA
GGGAGGAGGGGGGAAGAAGGGGCGATGGCAGCACCACAAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCACCAACAGCAGTATCAGGTCGAT
GTGAGGAGGGAAAGGGGGGATGGTCAGGGTGGTGATAAAGGAGGAGAAAG
AGGAGGCGGAGTGGAAGAAGGACCAAGCCGACGACAGCATCGCGCAAGCC
CTACCTCTTCCTCCCCACCCCGGAATGAGAATAAAGAGAACTTTGGAGTC
TCCACTCGGTGGGGGCATAATTCCACTTCCTCTGGTGCTGTATGTGGTTC
TGCTGGTGGTGCTGCTAGTGGTAGAGGTGCTGCTGGTGGTGGAGACAGTG
GAAGGCTATCGCCGGTGCCAGGGCCACTTCCTATCGCCTTCGGGATGGGA
GGAGGAGGAGGGCAGTCACGGGAAGCTCCTCAAGCAGCAGCAACCGTAAC
AGGAGTGGCGAGAGCAGCCCTGCTTGAGCAAATAGCCGCCAACCGCCGAC
GACACCAGAAAAATAATCAGCTGATGCGTCTGATGATGAGTGAGGGTGAT
GACGAGGAGGGTGAGGGGGGGGACGAGGAAGAGGTGACGTTACTTGACCC
TCATCCACTTGATCGTGCCGGCGCAGACAGTCAAAGCCGCCTTTTGTTGG
ACGAGACTCATCGGTTGAGAACAGAGAGAGAGCTGCTTTTGTCCACCAAG
AGGTATACCCTCGACGATCCAGTTATTCAGACTCTCAATCGCTTGATTCT
CGAGAGGGAGAGTGCCAATGCTGCAAGGGCTGCAGGGGAGAGGGAGGGGG
AGGGGTTGGGGATGGAGTCACAGGCATCGACGATTACATTTGAGGCGGCG
CAATCGCGAGAATTTCATCTGCATCGGAAGGAGCAGGAGCAGGAGCAGGA
TAAGGAGGAGGAAGAGGAGGGGGGAAAGAAGCTGCAACGGGTGTGA
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protein sequence of NO05G01800.1

>NO05G01800.1-protein ID=NO05G01800.1-protein|Name=NO05G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1132bp
MSSRASPDETEEEDLEEQTAFPIGRGRDYFLFTVDIVGWGGNGGGLQRLP
EADEGGMWLSYVLFKSVACTDRVYALEEEVKGGSGRRSTDVFRLRSAACG
ADLAAWFSGRDDADTSNGSIGDEESNRWLQIFLCAPKRFVAVARLDLHDL
LFQGRAPEDMTVDFFPHESFGRFEMEEWGENGPLGMPSGVWVDVRVRLER
DFGEGSIVEGMGEERGRQARQISPPAADKGLSGIPHAASATHTVRNIREG
EGEEEDEEEEETGEEEEEEEEEEEEEVGEDSLLAQQEEDEAHLRPAGRRN
FRLSVDLRAVVGLSRAHQIYLAYHYPHLKAADASRAGGRERETSALDRPV
VSTPVWAAARVETPMMRACCTFDFPGSYEGLDEVAEGHPFEVRVKAKDTG
GRIGGGGVEIGRVMLPLLELMQDTSVSFRSVIKPRVFKSYDACRRFDARQ
RTSSSAAAPPPVVMRVLDRYLPLIDTSSSGSGGEDGASLRAVLVLEDLGA
ADPVSPAATEAPAASAASAETAAVNMVQQQAQQPHLSTLPPSFPLALTLL
DVERKKLEFEDWRHRTEVEWSERLRAKEAERMSMLDRMHERRKKEQQEFW
VKRRAEFERLEAELKRRVGKVEERERTVDGREEELKARAKKQVEECQALQ
RRLREEGKHQKEVEGLRNRELEGQLARMTQARKEAEAKIKEVQEDFARFR
REARKATPTVLQQEVATLKGEKAELLVRIEREKGEKTQAFLEKEQYRAAA
QRVARALKREQKRTNVNIRKHLDEMRLKYVVAEEGGTCRLDGERGELRDI
KMTLDAVRQFGGMPTGEGGGGKKGRWQHHKQQQQQQQQQQQQHQQQYQVD
VRRERGDGQGGDKGGERGGGVEEGPSRRQHRASPTSSSPPRNENKENFGV
STRWGHNSTSSGAVCGSAGGAASGRGAAGGGDSGRLSPVPGPLPIAFGMG
GGGGQSREAPQAAATVTGVARAALLEQIAANRRRHQKNNQLMRLMMSEGD
DEEGEGGDEEEVTLLDPHPLDRAGADSQSRLLLDETHRLRTERELLLSTK
RYTLDDPVIQTLNRLILERESANAARAAGEREGEGLGMESQASTITFEAA
QSREFHLHRKEQEQEQDKEEEEEGGKKLQRV*
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Synonyms
Publications