NO05G01800.1, NO05G01800.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G01800.1
Unique Name	NO05G01800.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3396
Alignment location	chr5:492295..495690 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:492295..495690 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G01800.1 vs.
Match: EWM28232.1 (hypothetical protein Naga_100004g105 [Nannochloropsis gaditana])

HSP 1 Score: 700.7 bits (1807), Expect = 7.600e-198
Identity = 481/979 (49.13%), Postives = 605/979 (61.80%), Query Frame = 0

Query:   11 EEEDLEEQTAFPIGRGRDYFLFTVDIVGWGGNGGGLQRLPEADEGGMWLSYVLFKSVACTDRVYALEEEVKGGSGRRSTDVFRLRSAACGADLAAWFSG----RDDADTSNGSIG---DEESNRWLQIFLCAPKRFVAVARLDLHDLLFQGRAPEDMTVDFFPHESFGRFEMEEWGENGPLGMPSGVWVDVRVRLERDFGEGSIVEGMGEERGRQARQISPPAADKGLSGIPHAASATHTVRNIREG--------------EGEEEDEEEEETGEEEEEEEEEEEEEVGEDSLLAQQEEDEAHL------RPAGRRNFRLSVDLRAVVGLSRAHQIYLAYHYPHLKAADASRAGGRERETSALDRPVVSTPVWAAARVETPMMRACCTFDFPGSYEGLDEVAEGHPFEVRVKAKDTGGRIGGGGVEIGRVMLPLLELMQDTSVSFRSVIKPRVFKSYDACRRFDARQRTSSSAAAPPPVVMRVLDRYLPLIDTSSSGSGGEDGASLRAVLVLEDLGAA--DPVSPAAT---EAPAASAASAETAAVNMVQQQAQQPHLSTLP------------------PSFPLALTLLDVERKKLEFEDWRHRTEVEWSERLRAKEAERMSMLDRMHERRKKEQQEFWVKRRAEFERLEAELKRRVGKVEERERTVDGREEELKARAKKQVEECQALQRRLREEGKHQKEVEGLRNRELEGQLARMTQARKEAEAKIKEVQEDFARFRREARKATPTVLQQEVATLKGEKAELLVRIEREKGEKTQAFLEKEQYRAAAQRVARALKREQKRTNVNIRKHLDEMRLKYVVAEEGGTCRLDGERGELRDIKMTLDAVRQFGGMPTGEGGGGKKGRWQHHKQQQQQQQQQQQQHQQQYQVDVRRERGDGQGGDKGGERGGGVEEGPSRRQHR--ASPTSSSPPRNENKENFGV-STRWGHNSTSSGAVCGSA----------GGAASGRG 927
            E E  +EQ AF IGRGRD+FLFTVDI GWGG+G GLQ LP+A E G+WLSY+LFKSVACTDRVY+L+++VK GSGRRSTD+FRLRS   GADLAAWFSG    ++  +  NG  G   D  SNRWLQ+FLCAP+RF+A+ RLDL +LL +GR PE+MT DFFPHES GRF+ME WGE GP G   GVWVDVR+RLERD GEG   E   E  G        P+   G S    A S  +T+    +G              EG +E   E+E G++ EEEEEEEEE+V E   +A   +   H       RP GRR FRLS+DLRA+  LS A  +YLAYHYP L + D   + G +++  ALD+ V S PV   A  E  M R+C T++ PG Y+ L+++A  HP  V V  +  G +  G  +E+G+V LPL  L++  +V++RS + PRVFK+Y ACRRF   +R S   AAPPP+ MRV+D YLP+       SGG+  ASLRAVLVLEDLG A   P   A+T   + P  ++ SA + A    Q   +    +TLP                  P    AL+LL+V R+KLEFEDWRHRTEVEWSERLRA+EAER+++LD++HE+R+ EQ+    + +A   RLE EL+RR+G VE  ER    +EEE+KARA +QVEECQ+LQRRLR E K+QKEVE LR RELEGQL R+ +AR+EAE + KEVQE++ARFRRE RK  P  LQ EVA LKGEKAEL  R ERE+ EK QA LEKEQYR A QR ARA +R+ ++  + +R+   ++RL+Y+  E  G  R+DG   EL DIK TLDAVRQ    P             ++K+  + QQQ  Q        D      +G GG     RG  V   P +   R   SP SSSP    +KEN G  STRW   S+SS +  G +           GAA GRG
Sbjct:   11 EGEQDDEQAAFSIGRGRDFFLFTVDITGWGGDGAGLQVLPDATEEGVWLSYILFKSVACTDRVYSLDKDVKNGSGRRSTDIFRLRSEGNGADLAAWFSGTSVWQEQLEDGNGGSGKEVDAGSNRWLQLFLCAPQRFLAMVRLDLWELLLEGRRPEEMTADFFPHESSGRFQMEGWGEEGPSGQGCGVWVDVRMRLERDGGEGLSREVFEEGCGL-------PSLSSGSSPQRQALSV-YTIAGAGQGKKSTTGSHPQGWPEEGGQEKGGEDEGGQDAEEEEEEEEEDVKERISMASAGDRHEHESSWTRDRPVGRRRFRLSLDLRAIRDLSEARLLYLAYHYPFLNSIDPEGSDGSDKK--ALDQAVASDPVLVPAGSEMAMDRSCWTYELPGRYDALEDMAARHPLIVSVMERQAGRK--GADIEVGQVQLPLRALLKQ-AVTYRSAVHPRVFKTYAACRRFV--ERRSPLKAAPPPIAMRVIDTYLPV-------SGGDLRASLRAVLVLEDLGPAGEPPAQDASTHYRQRPRGTSLSATSPAPQPYQSDQESRPSATLPAPSTDTPVPPAASPSSAQPDLSAALSLLEVRREKLEFEDWRHRTEVEWSERLRAREAERLALLDQLHEKRESEQKAILKRGQAALARLERELRRRLGDVEGTERQQAAKEEEMKARAAQQVEECQSLQRRLRAEAKYQKEVEALRRRELEGQLDRLKEARQEAETRTKEVQEEYARFRRETRKNVPAALQAEVAALKGEKAELAARWERERAEKMQALLEKEQYRTALQRTARAWRRDTRKFEMALRRQAGDVRLEYLSRE--GQYRVDGRMEELLDIKRTLDAVRQSSKPPAVA---------MYNKKPPEAQQQPPQ--------DALGVGSEGTGGGPLEARGRRVRPAPVKAVSRPPPSPASSSP---GDKENLGASSTRWDLISSSSESKSGRSFLEIEGLADLEGAARGRG 945

The following BLAST results are available for this feature:

BLAST of NO05G01800.1 vs.

BLAST of NO05G01800.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28232.1	7.600e-198	49.13	hypothetical protein Naga_100004g105 [Nannochlorop...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G01800	NO05G01800	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01800.1	NO05G01800.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01800.1.cds1	NO05G01800.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:492295..495690+
coding sequence from alignment at chr5:492295..495690+

mRNA sequence

>NO05G01800.1 ID=NO05G01800.1|Name=NO05G01800.1|organism=Nannochloropsis oceanica|type=mRNA|length=3396bp
ATGTCATCACGAGCATCGCCTGACGAGACAGAGGAAGAGGATTTGGAGGA
GCAGACGGCCTTCCCAATTGGACGCGGGCGGGACTACTTTCTCTTCACCG
TCGACATAGTGGGCTGGGGTGGGAACGGGGGAGGCTTGCAGCGGTTGCCT
GAGGCTGATGAGGGAGGCATGTGGCTCTCGTATGTCTTGTTCAAGTCCGT
GGCCTGTACTGACCGTGTGTATGCGCTCGAGGAAGAGGTCAAAGGTGGAA
GCGGACGGCGGAGCACGGACGTTTTTCGCTTGCGTAGTGCTGCGTGCGGG
GCAGACCTAGCGGCCTGGTTCTCGGGTCGCGATGATGCCGACACCAGCAA
TGGCAGCATCGGGGATGAGGAGAGTAATCGATGGCTGCAAATCTTTTTGT
GTGCACCCAAACGGTTCGTGGCTGTGGCGAGATTGGACTTGCATGACTTA
CTCTTCCAGGGAAGGGCACCCGAAGACATGACAGTAGACTTCTTTCCGCA
TGAATCTTTCGGGCGCTTCGAAATGGAGGAATGGGGGGAGAATGGGCCAC
TAGGTATGCCGAGTGGGGTGTGGGTAGATGTACGTGTCAGACTGGAGAGG
GATTTTGGGGAGGGATCCATAGTGGAGGGAATGGGGGAGGAGAGAGGAAG
GCAGGCACGACAGATATCCCCTCCAGCGGCCGATAAGGGCTTGTCTGGTA
TACCGCATGCTGCCTCAGCGACACATACTGTTAGAAATATAAGGGAAGGG
GAGGGGGAAGAGGAAGATGAGGAGGAGGAAGAGACGGGAGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAGAGGACTCCCTGCTGG
CCCAACAAGAGGAAGACGAGGCTCACCTCCGTCCAGCAGGCCGACGGAAT
TTCCGACTCTCAGTAGATTTGCGGGCTGTCGTTGGTTTGAGTCGAGCCCA
TCAGATTTACCTTGCGTACCATTATCCGCATCTTAAAGCTGCCGATGCAT
CACGCGCAGGAGGGAGGGAGCGAGAGACTTCGGCATTGGATCGACCTGTT
GTCTCGACGCCTGTCTGGGCTGCGGCCAGGGTGGAGACGCCGATGATGCG
TGCGTGTTGTACGTTTGATTTTCCGGGGAGTTATGAAGGGTTGGATGAGG
TAGCGGAGGGGCATCCTTTTGAAGTAAGAGTTAAGGCGAAGGATACTGGA
GGAAGAATAGGAGGAGGAGGAGTGGAAATTGGGCGGGTGATGCTTCCTCT
GCTGGAATTAATGCAGGATACCTCGGTGAGTTTCCGAAGTGTGATAAAAC
CGAGGGTATTTAAGTCGTATGATGCGTGCCGACGGTTTGATGCCCGGCAA
CGCACCTCTTCCTCTGCTGCTGCTCCTCCTCCTGTAGTAATGCGCGTGCT
CGATAGGTACTTGCCTCTCATTGACACCAGCAGCAGCGGCAGTGGTGGCG
AAGACGGGGCGTCCTTGCGAGCTGTCCTAGTGCTAGAGGACTTGGGAGCC
GCCGACCCCGTCTCACCGGCAGCAACTGAGGCACCAGCAGCATCAGCAGC
ATCAGCAGAAACAGCGGCAGTCAACATGGTCCAACAACAAGCACAACAAC
CCCACCTATCCACCCTTCCTCCCTCCTTCCCCCTTGCATTGACCCTATTG
GATGTGGAAAGGAAAAAATTGGAATTTGAGGATTGGAGGCATCGGACCGA
GGTGGAGTGGTCCGAGAGGCTACGAGCCAAAGAGGCCGAACGAATGTCGA
TGCTGGACAGGATGCATGAGAGGAGAAAGAAGGAGCAGCAGGAGTTTTGG
GTGAAGAGACGGGCAGAATTTGAGAGGTTGGAGGCGGAGCTGAAGAGGAG
GGTGGGCAAAGTGGAGGAGAGGGAGAGGACGGTGGATGGGAGGGAGGAGG
AGCTGAAAGCACGCGCGAAGAAGCAGGTGGAGGAGTGTCAGGCCTTGCAG
CGGAGGTTGAGGGAGGAGGGGAAACATCAGAAGGAGGTAGAGGGGCTGAG
GAATAGGGAGTTGGAGGGACAGCTGGCGCGCATGACGCAAGCGAGGAAGG
AGGCGGAGGCGAAGATAAAAGAGGTCCAGGAGGACTTTGCTCGCTTTCGA
CGGGAGGCACGCAAAGCGACACCAACTGTATTGCAACAGGAGGTTGCAAC
ACTCAAGGGGGAAAAAGCGGAATTACTCGTCCGAATAGAGCGTGAAAAGG
GAGAGAAAACACAGGCTTTCCTAGAAAAAGAACAGTACAGGGCCGCGGCC
CAGCGGGTAGCTCGGGCGCTGAAACGGGAGCAAAAAAGGACGAACGTCAA
TATTCGGAAACATTTGGATGAGATGCGGCTGAAATACGTGGTGGCGGAGG
AGGGAGGGACGTGTCGGCTGGATGGGGAAAGAGGCGAGCTGCGGGACATC
AAAATGACCTTGGACGCTGTGAGGCAGTTTGGGGGCATGCCGACGGGGGA
GGGAGGAGGGGGGAAGAAGGGGCGATGGCAGCACCACAAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCACCAACAGCAGTATCAGGTCGAT
GTGAGGAGGGAAAGGGGGGATGGTCAGGGTGGTGATAAAGGAGGAGAAAG
AGGAGGCGGAGTGGAAGAAGGACCAAGCCGACGACAGCATCGCGCAAGCC
CTACCTCTTCCTCCCCACCCCGGAATGAGAATAAAGAGAACTTTGGAGTC
TCCACTCGGTGGGGGCATAATTCCACTTCCTCTGGTGCTGTATGTGGTTC
TGCTGGTGGTGCTGCTAGTGGTAGAGGTGCTGCTGGTGGTGGAGACAGTG
GAAGGCTATCGCCGGTGCCAGGGCCACTTCCTATCGCCTTCGGGATGGGA
GGAGGAGGAGGGCAGTCACGGGAAGCTCCTCAAGCAGCAGCAACCGTAAC
AGGAGTGGCGAGAGCAGCCCTGCTTGAGCAAATAGCCGCCAACCGCCGAC
GACACCAGAAAAATAATCAGCTGATGCGTCTGATGATGAGTGAGGGTGAT
GACGAGGAGGGTGAGGGGGGGGACGAGGAAGAGGTGACGTTACTTGACCC
TCATCCACTTGATCGTGCCGGCGCAGACAGTCAAAGCCGCCTTTTGTTGG
ACGAGACTCATCGGTTGAGAACAGAGAGAGAGCTGCTTTTGTCCACCAAG
AGGTATACCCTCGACGATCCAGTTATTCAGACTCTCAATCGCTTGATTCT
CGAGAGGGAGAGTGCCAATGCTGCAAGGGCTGCAGGGGAGAGGGAGGGGG
AGGGGTTGGGGATGGAGTCACAGGCATCGACGATTACATTTGAGGCGGCG
CAATCGCGAGAATTTCATCTGCATCGGAAGGAGCAGGAGCAGGAGCAGGA
TAAGGAGGAGGAAGAGGAGGGGGGAAAGAAGCTGCAACGGGTGTGA

protein sequence of NO05G01800.1

>NO05G01800.1-protein ID=NO05G01800.1-protein|Name=NO05G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1132bp
MSSRASPDETEEEDLEEQTAFPIGRGRDYFLFTVDIVGWGGNGGGLQRLP
EADEGGMWLSYVLFKSVACTDRVYALEEEVKGGSGRRSTDVFRLRSAACG
ADLAAWFSGRDDADTSNGSIGDEESNRWLQIFLCAPKRFVAVARLDLHDL
LFQGRAPEDMTVDFFPHESFGRFEMEEWGENGPLGMPSGVWVDVRVRLER
DFGEGSIVEGMGEERGRQARQISPPAADKGLSGIPHAASATHTVRNIREG
EGEEEDEEEEETGEEEEEEEEEEEEEVGEDSLLAQQEEDEAHLRPAGRRN
FRLSVDLRAVVGLSRAHQIYLAYHYPHLKAADASRAGGRERETSALDRPV
VSTPVWAAARVETPMMRACCTFDFPGSYEGLDEVAEGHPFEVRVKAKDTG
GRIGGGGVEIGRVMLPLLELMQDTSVSFRSVIKPRVFKSYDACRRFDARQ
RTSSSAAAPPPVVMRVLDRYLPLIDTSSSGSGGEDGASLRAVLVLEDLGA
ADPVSPAATEAPAASAASAETAAVNMVQQQAQQPHLSTLPPSFPLALTLL
DVERKKLEFEDWRHRTEVEWSERLRAKEAERMSMLDRMHERRKKEQQEFW
VKRRAEFERLEAELKRRVGKVEERERTVDGREEELKARAKKQVEECQALQ
RRLREEGKHQKEVEGLRNRELEGQLARMTQARKEAEAKIKEVQEDFARFR
REARKATPTVLQQEVATLKGEKAELLVRIEREKGEKTQAFLEKEQYRAAA
QRVARALKREQKRTNVNIRKHLDEMRLKYVVAEEGGTCRLDGERGELRDI
KMTLDAVRQFGGMPTGEGGGGKKGRWQHHKQQQQQQQQQQQQHQQQYQVD
VRRERGDGQGGDKGGERGGGVEEGPSRRQHRASPTSSSPPRNENKENFGV
STRWGHNSTSSGAVCGSAGGAASGRGAAGGGDSGRLSPVPGPLPIAFGMG
GGGGQSREAPQAAATVTGVARAALLEQIAANRRRHQKNNQLMRLMMSEGD
DEEGEGGDEEEVTLLDPHPLDRAGADSQSRLLLDETHRLRTERELLLSTK
RYTLDDPVIQTLNRLILERESANAARAAGEREGEGLGMESQASTITFEAA
QSREFHLHRKEQEQEQDKEEEEEGGKKLQRV*

mRNA from alignment at chr5:492295..495690+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G01800.1 ID=NO05G01800.1|Name=NO05G01800.1|organism=Nannochloropsis oceanica|type=mRNA|length=3396bp|location=Sequence derived from alignment at chr5:492295..495690+ (Nannochloropsis oceanica)
ATGTCATCACGAGCATCGCCTGACGAGACAGAGGAAGAGGATTTGGAGGA
GCAGACGGCCTTCCCAATTGGACGCGGGCGGGACTACTTTCTCTTCACCG
TCGACATAGTGGGCTGGGGTGGGAACGGGGGAGGCTTGCAGCGGTTGCCT
GAGGCTGATGAGGGAGGCATGTGGCTCTCGTATGTCTTGTTCAAGTCCGT
GGCCTGTACTGACCGTGTGTATGCGCTCGAGGAAGAGGTCAAAGGTGGAA
GCGGACGGCGGAGCACGGACGTTTTTCGCTTGCGTAGTGCTGCGTGCGGG
GCAGACCTAGCGGCCTGGTTCTCGGGTCGCGATGATGCCGACACCAGCAA
TGGCAGCATCGGGGATGAGGAGAGTAATCGATGGCTGCAAATCTTTTTGT
GTGCACCCAAACGGTTCGTGGCTGTGGCGAGATTGGACTTGCATGACTTA
CTCTTCCAGGGAAGGGCACCCGAAGACATGACAGTAGACTTCTTTCCGCA
TGAATCTTTCGGGCGCTTCGAAATGGAGGAATGGGGGGAGAATGGGCCAC
TAGGTATGCCGAGTGGGGTGTGGGTAGATGTACGTGTCAGACTGGAGAGG
GATTTTGGGGAGGGATCCATAGTGGAGGGAATGGGGGAGGAGAGAGGAAG
GCAGGCACGACAGATATCCCCTCCAGCGGCCGATAAGGGCTTGTCTGGTA
TACCGCATGCTGCCTCAGCGACACATACTGTTAGAAATATAAGGGAAGGG
GAGGGGGAAGAGGAAGATGAGGAGGAGGAAGAGACGGGAGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAGAGGACTCCCTGCTGG
CCCAACAAGAGGAAGACGAGGCTCACCTCCGTCCAGCAGGCCGACGGAAT
TTCCGACTCTCAGTAGATTTGCGGGCTGTCGTTGGTTTGAGTCGAGCCCA
TCAGATTTACCTTGCGTACCATTATCCGCATCTTAAAGCTGCCGATGCAT
CACGCGCAGGAGGGAGGGAGCGAGAGACTTCGGCATTGGATCGACCTGTT
GTCTCGACGCCTGTCTGGGCTGCGGCCAGGGTGGAGACGCCGATGATGCG
TGCGTGTTGTACGTTTGATTTTCCGGGGAGTTATGAAGGGTTGGATGAGG
TAGCGGAGGGGCATCCTTTTGAAGTAAGAGTTAAGGCGAAGGATACTGGA
GGAAGAATAGGAGGAGGAGGAGTGGAAATTGGGCGGGTGATGCTTCCTCT
GCTGGAATTAATGCAGGATACCTCGGTGAGTTTCCGAAGTGTGATAAAAC
CGAGGGTATTTAAGTCGTATGATGCGTGCCGACGGTTTGATGCCCGGCAA
CGCACCTCTTCCTCTGCTGCTGCTCCTCCTCCTGTAGTAATGCGCGTGCT
CGATAGGTACTTGCCTCTCATTGACACCAGCAGCAGCGGCAGTGGTGGCG
AAGACGGGGCGTCCTTGCGAGCTGTCCTAGTGCTAGAGGACTTGGGAGCC
GCCGACCCCGTCTCACCGGCAGCAACTGAGGCACCAGCAGCATCAGCAGC
ATCAGCAGAAACAGCGGCAGTCAACATGGTCCAACAACAAGCACAACAAC
CCCACCTATCCACCCTTCCTCCCTCCTTCCCCCTTGCATTGACCCTATTG
GATGTGGAAAGGAAAAAATTGGAATTTGAGGATTGGAGGCATCGGACCGA
GGTGGAGTGGTCCGAGAGGCTACGAGCCAAAGAGGCCGAACGAATGTCGA
TGCTGGACAGGATGCATGAGAGGAGAAAGAAGGAGCAGCAGGAGTTTTGG
GTGAAGAGACGGGCAGAATTTGAGAGGTTGGAGGCGGAGCTGAAGAGGAG
GGTGGGCAAAGTGGAGGAGAGGGAGAGGACGGTGGATGGGAGGGAGGAGG
AGCTGAAAGCACGCGCGAAGAAGCAGGTGGAGGAGTGTCAGGCCTTGCAG
CGGAGGTTGAGGGAGGAGGGGAAACATCAGAAGGAGGTAGAGGGGCTGAG
GAATAGGGAGTTGGAGGGACAGCTGGCGCGCATGACGCAAGCGAGGAAGG
AGGCGGAGGCGAAGATAAAAGAGGTCCAGGAGGACTTTGCTCGCTTTCGA
CGGGAGGCACGCAAAGCGACACCAACTGTATTGCAACAGGAGGTTGCAAC
ACTCAAGGGGGAAAAAGCGGAATTACTCGTCCGAATAGAGCGTGAAAAGG
GAGAGAAAACACAGGCTTTCCTAGAAAAAGAACAGTACAGGGCCGCGGCC
CAGCGGGTAGCTCGGGCGCTGAAACGGGAGCAAAAAAGGACGAACGTCAA
TATTCGGAAACATTTGGATGAGATGCGGCTGAAATACGTGGTGGCGGAGG
AGGGAGGGACGTGTCGGCTGGATGGGGAAAGAGGCGAGCTGCGGGACATC
AAAATGACCTTGGACGCTGTGAGGCAGTTTGGGGGCATGCCGACGGGGGA
GGGAGGAGGGGGGAAGAAGGGGCGATGGCAGCACCACAAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCACCAACAGCAGTATCAGGTCGAT
GTGAGGAGGGAAAGGGGGGATGGTCAGGGTGGTGATAAAGGAGGAGAAAG
AGGAGGCGGAGTGGAAGAAGGACCAAGCCGACGACAGCATCGCGCAAGCC
CTACCTCTTCCTCCCCACCCCGGAATGAGAATAAAGAGAACTTTGGAGTC
TCCACTCGGTGGGGGCATAATTCCACTTCCTCTGGTGCTGTATGTGGTTC
TGCTGGTGGTGCTGCTAGTGGTAGAGGTGCTGCTGGTGGTGGAGACAGTG
GAAGGCTATCGCCGGTGCCAGGGCCACTTCCTATCGCCTTCGGGATGGGA
GGAGGAGGAGGGCAGTCACGGGAAGCTCCTCAAGCAGCAGCAACCGTAAC
AGGAGTGGCGAGAGCAGCCCTGCTTGAGCAAATAGCCGCCAACCGCCGAC
GACACCAGAAAAATAATCAGCTGATGCGTCTGATGATGAGTGAGGGTGAT
GACGAGGAGGGTGAGGGGGGGGACGAGGAAGAGGTGACGTTACTTGACCC
TCATCCACTTGATCGTGCCGGCGCAGACAGTCAAAGCCGCCTTTTGTTGG
ACGAGACTCATCGGTTGAGAACAGAGAGAGAGCTGCTTTTGTCCACCAAG
AGGTATACCCTCGACGATCCAGTTATTCAGACTCTCAATCGCTTGATTCT
CGAGAGGGAGAGTGCCAATGCTGCAAGGGCTGCAGGGGAGAGGGAGGGGG
AGGGGTTGGGGATGGAGTCACAGGCATCGACGATTACATTTGAGGCGGCG
CAATCGCGAGAATTTCATCTGCATCGGAAGGAGCAGGAGCAGGAGCAGGA
TAAGGAGGAGGAAGAGGAGGGGGGAAAGAAGCTGCAACGGGTGTGA

Coding sequence (CDS) from alignment at chr5:492295..495690+

>NO05G01800.1 ID=NO05G01800.1|Name=NO05G01800.1|organism=Nannochloropsis oceanica|type=CDS|length=3396bp|location=Sequence derived from alignment at chr5:492295..495690+ (Nannochloropsis oceanica)
ATGTCATCACGAGCATCGCCTGACGAGACAGAGGAAGAGGATTTGGAGGA
GCAGACGGCCTTCCCAATTGGACGCGGGCGGGACTACTTTCTCTTCACCG
TCGACATAGTGGGCTGGGGTGGGAACGGGGGAGGCTTGCAGCGGTTGCCT
GAGGCTGATGAGGGAGGCATGTGGCTCTCGTATGTCTTGTTCAAGTCCGT
GGCCTGTACTGACCGTGTGTATGCGCTCGAGGAAGAGGTCAAAGGTGGAA
GCGGACGGCGGAGCACGGACGTTTTTCGCTTGCGTAGTGCTGCGTGCGGG
GCAGACCTAGCGGCCTGGTTCTCGGGTCGCGATGATGCCGACACCAGCAA
TGGCAGCATCGGGGATGAGGAGAGTAATCGATGGCTGCAAATCTTTTTGT
GTGCACCCAAACGGTTCGTGGCTGTGGCGAGATTGGACTTGCATGACTTA
CTCTTCCAGGGAAGGGCACCCGAAGACATGACAGTAGACTTCTTTCCGCA
TGAATCTTTCGGGCGCTTCGAAATGGAGGAATGGGGGGAGAATGGGCCAC
TAGGTATGCCGAGTGGGGTGTGGGTAGATGTACGTGTCAGACTGGAGAGG
GATTTTGGGGAGGGATCCATAGTGGAGGGAATGGGGGAGGAGAGAGGAAG
GCAGGCACGACAGATATCCCCTCCAGCGGCCGATAAGGGCTTGTCTGGTA
TACCGCATGCTGCCTCAGCGACACATACTGTTAGAAATATAAGGGAAGGG
GAGGGGGAAGAGGAAGATGAGGAGGAGGAAGAGACGGGAGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAGAGGACTCCCTGCTGG
CCCAACAAGAGGAAGACGAGGCTCACCTCCGTCCAGCAGGCCGACGGAAT
TTCCGACTCTCAGTAGATTTGCGGGCTGTCGTTGGTTTGAGTCGAGCCCA
TCAGATTTACCTTGCGTACCATTATCCGCATCTTAAAGCTGCCGATGCAT
CACGCGCAGGAGGGAGGGAGCGAGAGACTTCGGCATTGGATCGACCTGTT
GTCTCGACGCCTGTCTGGGCTGCGGCCAGGGTGGAGACGCCGATGATGCG
TGCGTGTTGTACGTTTGATTTTCCGGGGAGTTATGAAGGGTTGGATGAGG
TAGCGGAGGGGCATCCTTTTGAAGTAAGAGTTAAGGCGAAGGATACTGGA
GGAAGAATAGGAGGAGGAGGAGTGGAAATTGGGCGGGTGATGCTTCCTCT
GCTGGAATTAATGCAGGATACCTCGGTGAGTTTCCGAAGTGTGATAAAAC
CGAGGGTATTTAAGTCGTATGATGCGTGCCGACGGTTTGATGCCCGGCAA
CGCACCTCTTCCTCTGCTGCTGCTCCTCCTCCTGTAGTAATGCGCGTGCT
CGATAGGTACTTGCCTCTCATTGACACCAGCAGCAGCGGCAGTGGTGGCG
AAGACGGGGCGTCCTTGCGAGCTGTCCTAGTGCTAGAGGACTTGGGAGCC
GCCGACCCCGTCTCACCGGCAGCAACTGAGGCACCAGCAGCATCAGCAGC
ATCAGCAGAAACAGCGGCAGTCAACATGGTCCAACAACAAGCACAACAAC
CCCACCTATCCACCCTTCCTCCCTCCTTCCCCCTTGCATTGACCCTATTG
GATGTGGAAAGGAAAAAATTGGAATTTGAGGATTGGAGGCATCGGACCGA
GGTGGAGTGGTCCGAGAGGCTACGAGCCAAAGAGGCCGAACGAATGTCGA
TGCTGGACAGGATGCATGAGAGGAGAAAGAAGGAGCAGCAGGAGTTTTGG
GTGAAGAGACGGGCAGAATTTGAGAGGTTGGAGGCGGAGCTGAAGAGGAG
GGTGGGCAAAGTGGAGGAGAGGGAGAGGACGGTGGATGGGAGGGAGGAGG
AGCTGAAAGCACGCGCGAAGAAGCAGGTGGAGGAGTGTCAGGCCTTGCAG
CGGAGGTTGAGGGAGGAGGGGAAACATCAGAAGGAGGTAGAGGGGCTGAG
GAATAGGGAGTTGGAGGGACAGCTGGCGCGCATGACGCAAGCGAGGAAGG
AGGCGGAGGCGAAGATAAAAGAGGTCCAGGAGGACTTTGCTCGCTTTCGA
CGGGAGGCACGCAAAGCGACACCAACTGTATTGCAACAGGAGGTTGCAAC
ACTCAAGGGGGAAAAAGCGGAATTACTCGTCCGAATAGAGCGTGAAAAGG
GAGAGAAAACACAGGCTTTCCTAGAAAAAGAACAGTACAGGGCCGCGGCC
CAGCGGGTAGCTCGGGCGCTGAAACGGGAGCAAAAAAGGACGAACGTCAA
TATTCGGAAACATTTGGATGAGATGCGGCTGAAATACGTGGTGGCGGAGG
AGGGAGGGACGTGTCGGCTGGATGGGGAAAGAGGCGAGCTGCGGGACATC
AAAATGACCTTGGACGCTGTGAGGCAGTTTGGGGGCATGCCGACGGGGGA
GGGAGGAGGGGGGAAGAAGGGGCGATGGCAGCACCACAAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCACCAACAGCAGTATCAGGTCGAT
GTGAGGAGGGAAAGGGGGGATGGTCAGGGTGGTGATAAAGGAGGAGAAAG
AGGAGGCGGAGTGGAAGAAGGACCAAGCCGACGACAGCATCGCGCAAGCC
CTACCTCTTCCTCCCCACCCCGGAATGAGAATAAAGAGAACTTTGGAGTC
TCCACTCGGTGGGGGCATAATTCCACTTCCTCTGGTGCTGTATGTGGTTC
TGCTGGTGGTGCTGCTAGTGGTAGAGGTGCTGCTGGTGGTGGAGACAGTG
GAAGGCTATCGCCGGTGCCAGGGCCACTTCCTATCGCCTTCGGGATGGGA
GGAGGAGGAGGGCAGTCACGGGAAGCTCCTCAAGCAGCAGCAACCGTAAC
AGGAGTGGCGAGAGCAGCCCTGCTTGAGCAAATAGCCGCCAACCGCCGAC
GACACCAGAAAAATAATCAGCTGATGCGTCTGATGATGAGTGAGGGTGAT
GACGAGGAGGGTGAGGGGGGGGACGAGGAAGAGGTGACGTTACTTGACCC
TCATCCACTTGATCGTGCCGGCGCAGACAGTCAAAGCCGCCTTTTGTTGG
ACGAGACTCATCGGTTGAGAACAGAGAGAGAGCTGCTTTTGTCCACCAAG
AGGTATACCCTCGACGATCCAGTTATTCAGACTCTCAATCGCTTGATTCT
CGAGAGGGAGAGTGCCAATGCTGCAAGGGCTGCAGGGGAGAGGGAGGGGG
AGGGGTTGGGGATGGAGTCACAGGCATCGACGATTACATTTGAGGCGGCG
CAATCGCGAGAATTTCATCTGCATCGGAAGGAGCAGGAGCAGGAGCAGGA
TAAGGAGGAGGAAGAGGAGGGGGGAAAGAAGCTGCAACGGGTGTGA

Synonyms

Publications