NO05G01700, NO05G01700 (gene) Nannochloropsis oceanica

Overview
NameNO05G01700
Unique NameNO05G01700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1965
Alignment locationchr5:464982..466946 +

Link to JBrowse

Properties
Property NameValue
DescriptionDual specificity protein phosphatase 15
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:464982..466946 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016791phosphatase activity
GO:0008138protein tyrosine/serine/threonine phosphatase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016311dephosphorylation
GO:0006470protein dephosphorylation
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR000387Tyr/Dual-sp_Pase
IPR024950DUSP
IPR000340Dual-sp_phosphatase_cat-dom
IPR020422Dual-sp_phosphatase_subgr_cat
Homology
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_016196434.1 (dual specificity protein phosphatase 1 [Arachis ipaensis] >XP_020959999.1 dual specificity protein phosphatase 1 [Arachis ipaensis] >XP_020960000.1 dual specificity protein phosphatase 1 [Arachis ipaensis] >XP_020960003.1 dual specificity protein phosphatase 1 [Arachis ipaensis] >XP_020960007.1 dual specificity protein phosphatase 1 [Arachis ipaensis] >XP_020960009.1 dual specificity protein phosphatase 1 [Arachis ipaensis])

HSP 1 Score: 98.2 bits (243), Expect = 4.500e-17
Identity = 52/130 (40.00%), Postives = 72/130 (55.38%), Query Frame = 0 
Query:   37 LLHGGANVLQDPSFYTTYGVTHALSICQAKPPPTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFEK 167
            L  G      + +   +  VTH L++    PP   G  + K IN +D    DL  +F     FI +A++ GG V VHC AG SRS T V +YLM    +S  +AL  +++RR +A PNPGF+RQL+ FEK
Sbjct:   44 LFLGSIGTAANKNALKSLNVTHILTVAGKLPPTNPGDFVYKVINVADRDDVDLKQYFNQCFDFIEDAKMHGGGVLVHCFAGKSRSVTVVVAYLMKTRGMSLSEALQHVKSRRPLASPNPGFIRQLEDFEK 173
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_018368297.1 (PREDICTED: dual specificity protein phosphatase 12-like [Trachymyrmex cornetzi] >XP_018368298.1 PREDICTED: dual specificity protein phosphatase 12-like [Trachymyrmex cornetzi] >XP_018368299.1 PREDICTED: dual specificity protein phosphatase 12-like [Trachymyrmex cornetzi] >KYN16030.1 Dual specificity protein phosphatase 12 [Trachymyrmex cornetzi])

HSP 1 Score: 97.8 bits (242), Expect = 5.900e-17
Identity = 55/135 (40.74%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPP----PTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFE 166
            P L  G      D  +    G+TH L+I     P          ++K+I  +D+P  DLL HFED   FI  A    G V VHC  GVSRS T V +Y M  H LSF DAL  ++++R    PNPGFV QL+ +E
Sbjct:   26 PGLFLGNLTAATDVDWLKEAGITHILTIDSCPLPRKIQERLPNLIIKYIQVTDMPREDLLTHFEDSYDFIDRALDSDGKVLVHCYFGVSRSATVVIAYTMKKHELSFADALQVVKSKRRFVAPNPGFVAQLRLYE 160
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_011631095.1 (PREDICTED: dual specificity protein phosphatase 12-like [Pogonomyrmex barbatus] >XP_011631096.1 PREDICTED: dual specificity protein phosphatase 12-like [Pogonomyrmex barbatus])

HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17
Identity = 55/135 (40.74%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPP----PTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFE 166
            P L  G      D  +    G+TH L+I     P          ++K+I  +D+P  DLL HFED   FI  A    G V VHC  GVSRS T V +Y M  H LSF DAL  ++++R    PNPGF+ QLQ +E
Sbjct:   26 PGLFLGNLTAATDVDWLKEAGITHILTIDSCPLPRKIQERLPNLIIKYIQVTDIPREDLLTHFEDSYEFIDRALDSDGKVLVHCYFGVSRSATMVIAYTMKKHELSFSDALQAVKSKRRFVSPNPGFMAQLQLYE 160
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_018055228.1 (PREDICTED: dual specificity protein phosphatase 12-like [Atta colombica] >XP_018055230.1 PREDICTED: dual specificity protein phosphatase 12-like [Atta colombica] >KYM77441.1 Dual specificity protein phosphatase 12 [Atta colombica])

HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17
Identity = 55/135 (40.74%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPP----PTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFE 166
            P L  G      D  +    G+TH L+I     P          ++K+I  +D+P  DLL HFED   FI  A    G V VHC  GVSRS T V +Y+M  H LSF D L  I+++R    PNPGFV QL+ +E
Sbjct:   26 PGLFLGNLTAATDVDWLKEAGITHILTIDSCPLPRKIQERLPNLIIKYIQVTDMPREDLLTHFEDSYDFIDRALDSDGRVLVHCYFGVSRSATVVIAYIMKKHELSFADTLQVIKSKRRFVAPNPGFVAQLRLYE 160
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: EJY67741.1 (putative protein-tyrosine phosphatase (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-16
Identity = 51/113 (45.13%), Postives = 66/113 (58.41%), Query Frame = 0 
Query:   55 GVTHALSICQAKPPPTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFEKD 168
            G+TH L++ Q   P    L   K +N  D+P ++L  HF+  I +I +A   GG VYVHC AGVSRSTT + +YLM  H + + DAL   R  R    PN GF RQLQ F +D
Sbjct:   30 GITHILTVAQGIMPKFPTLFNYKLVNVLDMPSANLKQHFQTCIKYIKDAIAEGGTVYVHCYAGVSRSTTIIIAYLMQEHGMPYLDALQHCRKCRWFINPNDGFKRQLQTFSRD 142
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: KYN35880.1 (Dual specificity protein phosphatase 12, partial [Trachymyrmex septentrionalis])

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-16
Identity = 56/135 (41.48%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPP----PTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFE 166
            P L  G      D  +    G+TH L+I     P          ++K+I  +D+P  DLL HF D   FI  A    G V VHC  GVSRSTT V +Y M  H LSF DAL  I+++R    PNPGFV QL+ +E
Sbjct:   44 PGLFLGNLTAATDVDWLKEAGITHILTIDSCPLPRKIQERLPNLIIKYIQVTDMPREDLLTHFGDSYDFIDRALDSDGKVLVHCYFGVSRSTTIVIAYTMKKHELSFADALQVIKSKRRFVAPNPGFVAQLRLYE 178
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_016852984.1 (PREDICTED: dual specificity protein phosphatase 15 [Anolis carolinensis])

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-16
Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPPPTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFEKDPFTIQMRARIRNAF 182
            P L  G     +D    + + +TH +SI ++  P   G+T ++ I   D P +++  HF+  I FIH+ R+ GG   VHC AG+SRSTT V +Y+M +   S+++AL  ++  R VA PNPGF +QL+ +E      ++R R+   +
Sbjct:   16 PGLFLGNFIDAKDFDQLSRHNITHIISIHESPQPYIPGITYLR-IVLPDTPEANIKKHFKKCILFIHSCRLRGGNCLVHCLAGISRSTTLVLAYIMTVTQASWREALQAVKAVRPVANPNPGFRQQLEKYEGSRSEQKIRRRLERKY 161
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_018346972.1 (PREDICTED: dual specificity protein phosphatase 12-like [Trachymyrmex septentrionalis] >XP_018346973.1 PREDICTED: dual specificity protein phosphatase 12-like [Trachymyrmex septentrionalis])

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-16
Identity = 56/135 (41.48%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPP----PTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFE 166
            P L  G      D  +    G+TH L+I     P          ++K+I  +D+P  DLL HF D   FI  A    G V VHC  GVSRSTT V +Y M  H LSF DAL  I+++R    PNPGFV QL+ +E
Sbjct:   26 PGLFLGNLTAATDVDWLKEAGITHILTIDSCPLPRKIQERLPNLIIKYIQVTDMPREDLLTHFGDSYDFIDRALDSDGKVLVHCYFGVSRSTTIVIAYTMKKHELSFADALQVIKSKRRFVAPNPGFVAQLRLYE 160
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: XP_023671410.1 (dual specificity protein phosphatase 22-B-like isoform X2 [Paramormyrops kingsleyae])

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-16
Identity = 63/175 (36.00%), Postives = 87/175 (49.71%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPPPTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFEKDPFTIQMRARIRNAFPHDVALVKADLLEIRQALAERSARLGRD 210
            P L  G     +D      Y +TH LSI  +  P    +T +  I  SDLP  DL  HF+D I FIH +R+      VHC AGVSRS T V +Y+M +  L ++D L  +R  R  A PN GF+RQL+ FE        RA ++  +         D+ E++  L+E+    G D
Sbjct:   10 PDLYLGNFKDARDKEQLAKYNITHILSIHDSAAPLLQEMTYL-CIPASDLPSQDLTQHFKDSIAFIHESRLKREGCLVHCLAGVSRSVTLVVAYIMTVTGLGWQDTLSAVRVARPCAGPNAGFLRQLEDFESSQLA-DYRAWLKGKYKESPF---NDMEEVQILLSEKLKANGAD 179
[Close]
BLAST of NO05G01700 vs. NCBI_GenBank
Match: EFZ18155.1 (hypothetical protein SINV_16127, partial [Solenopsis invicta])

HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16
Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = 0 
Query:   35 PTLLHGGANVLQDPSFYTTYGVTHALSICQAKPP----PTAGLTMVKHINESDLPHSDLLPHFEDFIFFIHNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREVACPNPGFVRQLQAFE 166
            P L  G      D  +    G+TH L+I     P          ++K+I  +D+P  DLL HFED   FI  A    G V VHC  GVSRS T + +Y M  H LSF DAL+ ++++R    PNPGF+ QL+ +E
Sbjct:   45 PGLFLGNLTAATDVDWLKEAGITHILTIDSCPLPRKIQERLPNLIIKYIQMTDMPREDLLTHFEDSYEFIDRALDSEGRVLVHCYFGVSRSATVIIAYTMKKHELSFADALEMVKSKRRFVAPNPGFMAQLRLYE 179
The following BLAST results are available for this feature:
BLAST of NO05G01700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_016196434.14.500e-1740.00dual specificity protein phosphatase 1 [Arachis ip... [more]
XP_018368297.15.900e-1740.74PREDICTED: dual specificity protein phosphatase 12... [more]
XP_011631095.17.700e-1740.74PREDICTED: dual specificity protein phosphatase 12... [more]
XP_018055228.17.700e-1740.74PREDICTED: dual specificity protein phosphatase 12... [more]
EJY67741.11.000e-1645.13putative protein-tyrosine phosphatase (macronuclea... [more]
KYN35880.11.000e-1641.48Dual specificity protein phosphatase 12, partial [... [more]
XP_016852984.11.000e-1635.37PREDICTED: dual specificity protein phosphatase 15... [more]
XP_018346972.11.000e-1641.48PREDICTED: dual specificity protein phosphatase 12... [more]
XP_023671410.11.000e-1636.00dual specificity protein phosphatase 22-B-like iso... [more]
EFZ18155.11.300e-1639.26hypothetical protein SINV_16127, partial [Solenops... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003698NSK003698Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01700.1NO05G01700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583974gene_2958Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g94gene2351Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01700.1NO05G01700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01700 ID=NO05G01700|Name=NO05G01700|organism=Nannochloropsis oceanica|type=gene|length=1965bp
TGCCTGCGGTGGGAGGCATGGCTGAGTATGAATGGTGGGCAAGAGTAGGG
ACAAGTGAGAAATGAACGTAGAATGCTACGGCAGAATTTCCAGGTCATGG
TGCTGGGTGTGGATGATAGTTGTTCCCCCTGAGACAAGGCTGAAGGGCAT
CGCCGAGATCGATTTCCGCGAGAGGCCGGCACGCCGTCGTGCAACTTCTC
TTACCCCCAAAAAGTGTCTGTGACTTTCTGCCTCCATTTCGCCCACGACA
CCTCACAATCAACTCCTCACACTCTAACCCGCTCCCCGATACAAATTAGT
AGGGGGCGCGTTCAGGACCTTAGGCGGGCACTGACAGCCACCCCGGTGAC
CGACTGCGTCTATCCTCCCGGCGCATTCGTGTCGTCATCATCACCCTCGC
CCACGCCTACCCACCAACCGCCCCTACAAGCTACAATAATGGGAGGTGAA
CCCTCCAAGATCCTGCACGGGCCCCCACCGATCCCCACCACGAGAAGCAG
CAGCAATAATGACAACGACGAGCCGCGATTGCCCTCGCGCCCCACTCTCC
TTCACGGGGGAGCAAACGTTTTGCAAGACCCATCCTTTTACACCACATAT
GGAGTGACACACGCTCTCTCGATATGCCAAGCCAAGCCGCCACCGACCGC
GGGTCTGACGATGGTGAAGCACATCAATGAAAGCGACCTGCCGCACAGTG
ATCTGCTGCCTCATTTCGAGGATTTTATTTTTTTTATCCACAACGCACGC
GTTGGTGGAGGCGTAGTCTACGTgtaagtatgcaaagctccagttttttc
tccgctgcaatatcgagcacagctgtctcttgtttagacttgtcgtctcc
tcattcatcacaacgcacatacagGCACTGCGCCGCCGGGGTCAGTCGAT
CCACCACAGCTGTCTGCTCCTACTTGATGTGCATCCACGCCCTCTCCTTC
AAAGATGCCCTCGACTTCATCCGCACCCGTCGCGAAGTGGCTTGCCCCAA
CCCTGGCTTTGTCAGACAACTTCAAGCATTTGAAAAAGATCCATTCACCA
TTCAAATGCGTGCCCGTATCCGCAACGCCTTCCCTCATGACGTCGCTCTC
GTCAAAGCCGACCTTCTCGAAATCAGACAAGCACTCGCAGAGCGTTCCGC
CAGGCTAGGAAGAGACGAAAAAGCCCTGATCCTTGATCCTCGAAGCCGAA
TATTGGAAATGATTCACCAGATGCAAGAGCAGCAGGCAGGTGCGGCGGAA
GGGATGAGGGCAGGGGAGGATGATGAGAGTCACGAGCAGTGCCGGTTGCC
AATGAAGCCTCCCCCGGCGGGGTCGTCCGTGATGGCGATGAGGCTGGGGG
ATAAGGGGTATGGATTGACATGGTTGGAGGAGGAGAAGGACCATCACACC
CGAATGGAGGAGATGCCCCGATGAATGAGGTGTCAGGGAGGAGGGAGGGC
GAGTCGGAGAGGGGGAGTGAAGCTGCGTAGTGTGTGTATGTACGTTTTCC
TTAGATTTATGTCGACCGATCTTGACAGAGTGTCCGACAAAACAATACAT
TTTATAATATTTCATCATGGCAATTTCATAAGATAAAAGTGGCGAGACAA
GTAATTCTTCGAACATGACGAGGAGGCTGGGAAGGAGGGAGAAAGGGAAG
GGGACGAGAAATAGACCTCTATGTCAAGGGCACAACCCTTTATTTTCTTA
GACAAAATTTAACCTGTTAGATATGGGCTGCAAGTGGTAAACACTAAGCG
TACGGCCGCGAAGGCTTCCACTGTTTAAAAGCATTATACAAAGAAAGAAC
GAAAAAGAGGAAGAAGAAGGTGATAGAGGTGAAGAAGAAGAAGGCGAAGG
CGAAGAAGAATCTGCACGATGGGATAAATGATCTCTTTTCTAGCTACCGC
ACGGCCCGTGCAAGCTTCATAAAGATGTAAAAGGCAAAGTATAAGACGAG
GAAAGGGTTCGAAGC
back to top

protein sequence of NO05G01700.1

>NO05G01700.1-protein ID=NO05G01700.1-protein|Name=NO05G01700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MGGEPSKILHGPPPIPTTRSSSNNDNDEPRLPSRPTLLHGGANVLQDPSF
YTTYGVTHALSICQAKPPPTAGLTMVKHINESDLPHSDLLPHFEDFIFFI
HNARVGGGVVYVHCAAGVSRSTTAVCSYLMCIHALSFKDALDFIRTRREV
ACPNPGFVRQLQAFEKDPFTIQMRARIRNAFPHDVALVKADLLEIRQALA
ERSARLGRDEKALILDPRSRILEMIHQMQEQQAGAAEGMRAGEDDESHEQ
CRLPMKPPPAGSSVMAMRLGDKGYGLTWLEEEKDHHTRMEEMPR*
back to top
Synonyms
Publications