NO05G01650, NO05G01650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01650 vs. NCBI_GenBank
Match: ADP86164.1 (3'-5' exonuclease [Desulfovibrio vulgaris RCH1]) HSP 1 Score: 96.3 bits (238), Expect = 2.300e-16 Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 0 Query: 141 VLKGGGVLGMDAEWQPEIARFERNPVALLQLAWEEDVFLVRLQHLQ-GEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVRCKRRSMAWLAKEFLSIEMDKSQQCSDWGNVELSPEQIKYSSIDAWVAGAI 292 VL+ VLG D E +P + + N +L+QLA + V+L++L + GE+ L L+SD +I+K G + D + L + YA G VDL EV LGL + + LA FL I + K QCS+W N EL P+Q+ Y++ DAWV+ I Sbjct: 44 VLRSDSVLGFDTETRPTFRKGKVNLPSLVQLACADVVYLIQLNWVPLGEM---LADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDGGVVDLGEVARDLGL---ETHGLRNLAANFLGIRISKGAQCSNWSNRELGPQQVVYAATDAWVSREI 189
BLAST of NO05G01650 vs. NCBI_GenBank
Match: WP_010938381.1 (3'-5' exonuclease domain-containing protein 2 [Desulfovibrio vulgaris] >YP_010303.1 3' exoribonuclease [Desulfovibrio vulgaris str. Hildenborough] >AAS95562.1 3'- 5' exonuclease domain protein [Desulfovibrio vulgaris str. Hildenborough] >ABM28928.1 3'-5' exonuclease [Desulfovibrio vulgaris DP4]) HSP 1 Score: 96.3 bits (238), Expect = 2.300e-16 Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 0 Query: 141 VLKGGGVLGMDAEWQPEIARFERNPVALLQLAWEEDVFLVRLQHLQ-GEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVRCKRRSMAWLAKEFLSIEMDKSQQCSDWGNVELSPEQIKYSSIDAWVAGAI 292 VL+ VLG D E +P + + N +L+QLA + V+L++L + GE+ L L+SD +I+K G + D + L + YA G VDL EV LGL + + LA FL I + K QCS+W N EL P+Q+ Y++ DAWV+ I Sbjct: 45 VLRSDSVLGFDTETRPTFRKGKVNLPSLVQLACADVVYLIQLNWVPLGEM---LADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDGGVVDLGEVARDLGL---ETHGLRNLAANFLGIRISKGAQCSNWSNRELGPQQVVYAATDAWVSREI 190
BLAST of NO05G01650 vs. NCBI_GenBank
Match: XP_015750050.1 (PREDICTED: exonuclease 3'-5' domain-containing protein 2-like isoform X1 [Acropora digitifera]) HSP 1 Score: 95.9 bits (237), Expect = 3.000e-16 Identity = 62/173 (35.84%), Postives = 94/173 (54.34%), Query Frame = 0 Query: 148 LGMDAEWQPEIARFERNPVALLQLAWEE-DVFLVRLQHLQGEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVR----CKRRSMAWLAKEFLSIEMDKSQ--QCSDWGNVELSPEQIKYSSIDAWVAGAIAGNLFRTYKGQVGQPTCVSSFC 314 +G+D EW + + PVALLQ+A D FLVRL + ++P + +++ D +++K G I DAKRLL+ +A+ RG VDL+ V C++ S+ LAK L ++++KS QCS+W +LS +QI+Y+ DA VA I R K + Q FC Sbjct: 122 IGIDCEWVNKEGQVNA-PVALLQIATPLCDCFLVRLCKMDSQMPQIVKEILEDKTVLKFGVGIQNDAKRLLEMFAIHVRGCVDLRHVAQRTQSQNRDESCQKMSLDALAKRILGVKLNKSWKIQCSNWEEEKLSAQQIEYAMNDALVASHI---FLRLVKEKAKQSLDSEDFC 290
BLAST of NO05G01650 vs. NCBI_GenBank
Match: XP_015750051.1 (PREDICTED: exonuclease 3'-5' domain-containing protein 2-like isoform X2 [Acropora digitifera]) HSP 1 Score: 95.9 bits (237), Expect = 3.000e-16 Identity = 62/173 (35.84%), Postives = 94/173 (54.34%), Query Frame = 0 Query: 148 LGMDAEWQPEIARFERNPVALLQLAWEE-DVFLVRLQHLQGEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVR----CKRRSMAWLAKEFLSIEMDKSQ--QCSDWGNVELSPEQIKYSSIDAWVAGAIAGNLFRTYKGQVGQPTCVSSFC 314 +G+D EW + + PVALLQ+A D FLVRL + ++P + +++ D +++K G I DAKRLL+ +A+ RG VDL+ V C++ S+ LAK L ++++KS QCS+W +LS +QI+Y+ DA VA I R K + Q FC Sbjct: 103 IGIDCEWVNKEGQVNA-PVALLQIATPLCDCFLVRLCKMDSQMPQIVKEILEDKTVLKFGVGIQNDAKRLLEMFAIHVRGCVDLRHVAQRTQSQNRDESCQKMSLDALAKRILGVKLNKSWKIQCSNWEEEKLSAQQIEYAMNDALVASHI---FLRLVKEKAKQSLDSEDFC 271
BLAST of NO05G01650 vs. NCBI_GenBank
Match: PIE57530.1 (3'-5' exonuclease [Desulfobulbus propionicus]) HSP 1 Score: 95.5 bits (236), Expect = 4.000e-16 Identity = 56/188 (29.79%), Postives = 101/188 (53.72%), Query Frame = 0 Query: 120 VHVMPLESNKLEMLLAQVYARVLKGGGVLGMDAEWQPEIARFERNPVALLQLAWEEDVFLVRLQHLQGEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVRCKRRSMAWLAKEFLSIEMDKSQQCSDWGNVELSPEQIKYSSIDAWVAGAIAGNLFRTYKGQVGQPT 308 +H++ SN+ ++ Q + L+ +LG D E +P + + P ALLQLA + VFL +L L +P +L ++S+ +KVG +G D +L Q + +G +DL +++ LG+ + + LA L I + KS + ++W +LS +QI+Y++ DAW++ A+ L + G + T Sbjct: 38 IHIV---SNQTQL---QAAVKTLRTTNLLGFDTETRPTFRKGQSYPPALLQLADGQSVFLFKLYQL--GIPKALTDILSNQQTIKVGVAVGFDTVQLQQIHPFLPQGFIDLADISRHLGM---QHHGLRGLAAVTLGIRISKSVRTTNWAAPDLSAKQIRYAATDAWISRAVYSRLMEIHHGDIADDT 214
BLAST of NO05G01650 vs. NCBI_GenBank
Match: XP_009056337.1 (hypothetical protein LOTGIDRAFT_119943, partial [Lottia gigantea] >ESO93138.1 hypothetical protein LOTGIDRAFT_119943, partial [Lottia gigantea]) HSP 1 Score: 95.1 bits (235), Expect = 5.200e-16 Identity = 56/156 (35.90%), Postives = 88/156 (56.41%), Query Frame = 0 Query: 147 VLGMDAEWQPEIARFERNPVALLQLAWEEDV-FLVRLQHLQGEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGL-GLVRCKRRSMAWLAKEFL--SIEMDKSQQCSDWGNVELSPEQIKYSSIDAWVAGAIAGNLFRT 299 VLG+D EW + PVALLQLA + + L+RL ++ +P SL K++SD SI+K G + D +L +DY + G VDL+ + + G+ +CK + + L++ L SI D + +C +W LS +Q+KY+++DA V I L T Sbjct: 1 VLGLDCEWVMDRENNITYPVALLQLATYQGLCILIRLNLMENNIPKSLLKILSDRSILKCGVAVNDDGNKLYKDYGITVSGCVDLRHILPRVRGMYQCKSKGLKGLSEAILGFSIYKDSTIRCGNWEADVLSEKQVKYAALDALVGIDIYTKLVMT 156
BLAST of NO05G01650 vs. NCBI_GenBank
Match: XP_015770404.1 (PREDICTED: exonuclease 3'-5' domain-containing protein 2-like [Acropora digitifera]) HSP 1 Score: 95.1 bits (235), Expect = 5.200e-16 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 0 Query: 148 LGMDAEWQPEIARFERNPVALLQLAWEE-DVFLVRLQHLQGEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVR----CKRRSMAWLAKEFLSIEMDKSQ--QCSDWGNVELSPEQIKYSSIDAWVA 289 +G+D EW + + PVALLQ+A D FLVRL + G++P + +++ D +++K G I DAKRLL+ + + RG VDL+ V L C + S+ LAK L ++++KS QCS+W +LS +QI+Y+ DA VA Sbjct: 113 IGIDCEWVNNEGQ-QNMPVALLQIATPLCDCFLVRLCKMDGQMPQIVKEILEDKTVLKFGVGIQNDAKRLLEMFGIHVRGCVDLRHVAQRTQLKNGDQSCPKMSLDALAKRILGVKLNKSWRIQCSNWEEEKLSTQQIEYAMNDALVA 259
BLAST of NO05G01650 vs. NCBI_GenBank
Match: PRD33626.1 (Exonuclease 3'-5' domain-containing protein 2 [Nephila clavipes]) HSP 1 Score: 95.1 bits (235), Expect = 5.200e-16 Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = 0 Query: 147 VLGMDAEWQPEIARFERNPVALLQLAWEED-VFLVRLQHLQ-GEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVRCKRRSMAWLAKEFLSIEMDKSQQ--CSDWGNVELSPEQIKYSSIDAWVAGAI 292 +LG+D EW +R PV+LLQLA + LVRL + +P L ++S+ +++KVG + DA +L DY L+ RG +DL+ + L ++ K S+ L E L I ++KS++ CSDW LS EQ+KY++ DA +A I Sbjct: 63 ILGIDCEW--VTVENKRKPVSLLQLATDSGFCVLVRLSYFPVWLIPPVLIDILSNETLLKVGVGVAEDANKLFNDYGLEVRGFIDLRYLAKDLKELQGKNMSLKSLGVELLGINLNKSKELRCSDWNAPHLSEEQVKYAANDAIIAAKI 209
BLAST of NO05G01650 vs. NCBI_GenBank
Match: KDR07728.1 (Exonuclease 3'-5' domain-containing protein 2 [Zootermopsis nevadensis]) HSP 1 Score: 94.7 bits (234), Expect = 6.800e-16 Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = 0 Query: 133 LLAQVYARVLKGGGVLGMDAEWQPEIARFERNPVALLQLAWEED-VFLVRLQHLQGEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVRCKRRSMAWLAKEFLSIEMDKSQ--QCSDWGNVELSPEQIKYSSIDAWVA 289 ++A+ R VLG D EW + + R PVAL+QLA + LVRL HL+ ++P L +++ D ++ KVG DA L++DY + RG +DL+ + + G V R +A +A+ L I++DK+ +CSDW L P Q++Y+S DA VA Sbjct: 85 IVARTLQRKCANFRVLGFDCEWVTDFGK--RRPVALMQLATGDGFCALVRLCHLK-QLPHCLQEILEDATVFKVGVVPSDDASYLMKDYGITVRGCLDLRHLMAQSGTV--SRGGLAGMAQNLLGIKLDKNWRIRCSDWEAPVLEPHQVRYASQDALVA 238
BLAST of NO05G01650 vs. NCBI_GenBank
Match: WP_035065558.1 (3'-5' exonuclease domain-containing protein 2 [Desulfovibrio termitidis]) HSP 1 Score: 94.7 bits (234), Expect = 6.800e-16 Identity = 58/151 (38.41%), Postives = 85/151 (56.29%), Query Frame = 0 Query: 142 LKGGGVLGMDAEWQPEIARFERNPVALLQLAWEEDVFLVRLQHLQ-GEVPASLHKLMSDVSIVKVGCNIGGDAKRLLQDYALDTRGHVDLKEVTSGLGLVRCKRRSMAWLAKEFLSIEMDKSQQCSDWGNVELSPEQIKYSSIDAWVAGAI 292 L+ VLG D E +P + + N +L+QLA + V+L +L L GE AS ++SD IVK G + D + L + +A + G VDL EV LGL + + LA FL + + K QCS+W N EL+P+Q+ Y++ DAWV+ I Sbjct: 45 LRDEDVLGFDTETRPTFRKGKVNLPSLVQLACSDVVYLFQLNWLPFGEALAS---VLSDADIVKTGVAVRDDIRDLQKLFAFNDAGVVDLGEVARDLGL---ETHGLRNLAANFLEVRISKGAQCSNWSNRELAPQQVLYAATDAWVSREI 189 The following BLAST results are available for this feature:
BLAST of NO05G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01650 ID=NO05G01650|Name=NO05G01650|organism=Nannochloropsis oceanica|type=gene|length=1209bpback to top protein sequence of NO05G01650.1 >NO05G01650.1-protein ID=NO05G01650.1-protein|Name=NO05G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bpback to top Synonyms
Publications
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