NO05G01590, NO05G01590 (gene) Nannochloropsis oceanica

Overview
NameNO05G01590
Unique NameNO05G01590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3514
Alignment locationchr5:440712..444225 +

Link to JBrowse

Properties
Property NameValue
DescriptionSerine threonine protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:440712..444225 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_apaH
Homology
BLAST of NO05G01590 vs. NCBI_GenBank
Match: EWM28143.1 (serine threonine protein [Nannochloropsis gaditana])

HSP 1 Score: 718.8 bits (1854), Expect = 2.400e-203
Identity = 356/421 (84.56%), Postives = 378/421 (89.79%), Query Frame = 0
Query:  607 KDRRVVSSQIKDTKLTEYIKDKKKARSTRDRFLADTGLVRSEVHPPQRFIEVYYNSWADDFYTAITTSSSCFGPRWWFREALGHDPHEVMAWVREWETKARKHDVLSEGVERVIREAMEVGGSGEEDNPSVETERFLALKARLRERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNRYDRIMKRAQMLQKEGLGG----------------GEG------GGVEIEGGGK 1006
            +D RVVSS IKD KLTEYIKDKKKARS+RDRFLADTGLVRSEVHPPQRFIEVYYNSWADDFYTAITTSS+ FGPRWWFREALG +P EVMAWVREWE +ARKH VLSEGV  V++EAM VGG+ EE NP+VE ERFLALKARLRERREPK+I IGDVHGC+EELRALIKK EY PGDLLVFLGD+VAKGP+SI VIRLARE+GALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLE+ADVEWLRNLPWYISCSDLQLLFVHAGFVA+QRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQ+YEQALGLDTGCVYGGNLTAC+LPGKELVQVPAAEPYIVNRYDRIMKRA++LQKEG+GG                GEG      GG E E GG+
Sbjct:  459 RDCRVVSSHIKDAKLTEYIKDKKKARSSRDRFLADTGLVRSEVHPPQRFIEVYYNSWADDFYTAITTSSAAFGPRWWFREALGQEPQEVMAWVREWEAQARKHQVLSEGVGEVLKEAMAVGGA-EEGNPTVEMERFLALKARLRERREPKIIVIGDVHGCVEELRALIKKVEYSPGDLLVFLGDMVAKGPDSIPVIRLAREVGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEDADVEWLRNLPWYISCSDLQLLFVHAGFVADQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQEYEQALGLDTGCVYGGNLTACILPGKELVQVPAAEPYIVNRYDRIMKRARVLQKEGVGGRRWTDGEEMDLEEIAAGEGMEGDEDGGTEGEQGGR 878          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: XP_005853580.1 (serine threonine protein, partial [Nannochloropsis gaditana CCMP526] >EKU22776.1 serine threonine protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 619.8 bits (1597), Expect = 1.500e-173
Identity = 305/365 (83.56%), Postives = 325/365 (89.04%), Query Frame = 0
Query:  663 WADDFYTAITTSSSCFGPRWWFREALGHDPHEVMAWVREWETKARKHDVLSEGVERVIREAMEVGGSGEEDNPSVETERFLALKARLRERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNRYDRIMKRAQMLQKEGLGG----------------GEG------GGVEIEGGGK 1006
            WADDFYTAITTSS+ FGPRWWFREALG +P EVMAWVREWE +ARKH VLSEGV  V++EAM VGG+ EE NP+VE ERFLALKARLRERREPK+I IGDVHGC+EELRALIKK EY PGDLLVFLGD+VAKGP+SI VIRLARE+GALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLE+ADVEWLRNLPWYISCSDLQLLFVHAGFVA+QRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQ+YEQALGLDTGCVYGGNLTAC+LPGKELVQVPAAEPYIVNRYDRIMKRA++LQKEG+GG                GEG      GG E E GG+
Sbjct:  580 WADDFYTAITTSSAAFGPRWWFREALGQEPQEVMAWVREWEAQARKHQVLSEGVGEVLKEAMAVGGA-EEGNPTVEMERFLALKARLRERREPKIIVIGDVHGCVEELRALIKKVEYSPGDLLVFLGDMVAKGPDSIPVIRLAREVGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEDADVEWLRNLPWYISCSDLQLLFVHAGFVADQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQEYEQALGLDTGCVYGGNLTACILPGKELVQVPAAEPYIVNRYDRIMKRARVLQKEGVGGRRWTDGEEMDLEEIAAGEGMEGDEDGGTEGEQGGR 943          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: GAX23238.1 (hypothetical protein FisN_21Hh079 [Fistulifera solaris])

HSP 1 Score: 306.6 bits (784), Expect = 2.800e-79
Identity = 139/225 (61.78%), Postives = 179/225 (79.56%), Query Frame = 0
Query:  751 ERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSN-FKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNR 975
            ++R+P+VIAIGDVHGCI+EL+ L+++ +Y PGDL+VFLGDLV KGP+SI V+++AREIGA+ VRGNH+ EV+RW +A+  G      +SEHY IA  L +AD++W+ +LPWYIS  DL  LFVHAGFV+  RL+KQ+PR M+NMRSIL DGTV+++++ ++PWAR W GPQTVLFGHDA RG+Q YE A+GLDTGCVYGG LTAC+LP K LV V A   Y   R
Sbjct:  689 KQRQPRVIAIGDVHGCIDELQDLLRECDYRPGDLVVFLGDLVCKGPDSISVVQMAREIGAIGVRGNHDFEVVRWHQAIISGVDPPVVRSEHYHIASCLSKADMKWMYSLPWYISSQDLSTLFVHAGFVSGIRLAKQNPRLMMNMRSILPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVSARREYFKYR 913          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: GAX26610.1 (hypothetical protein FisN_21Lh079 [Fistulifera solaris])

HSP 1 Score: 306.2 bits (783), Expect = 3.700e-79
Identity = 138/225 (61.33%), Postives = 179/225 (79.56%), Query Frame = 0
Query:  751 ERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSN-FKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNR 975
            ++R+P+VIAIGDVHGCI+EL+ L+++ +Y PGDL+VFLGDLV KGP+SI V+++AREIGA+ VRGNH+ EV+RW +A+  G      +SEHY IA  L +AD++W+ +LPWY+S  DL  LFVHAGFV+  RL+KQ+PR M+NMRSIL DGTV+++++ ++PWAR W GPQTVLFGHDA RG+Q YE A+GLDTGCVYGG LTAC+LP K LV V A   Y   R
Sbjct:  718 KQRQPRVIAIGDVHGCIDELQDLLRECDYRPGDLVVFLGDLVCKGPDSISVVQMAREIGAIGVRGNHDFEVVRWHQAIISGVDPPVVRSEHYHIASCLSKADMKWMYSLPWYVSSQDLSTLFVHAGFVSGIRLAKQNPRLMMNMRSILPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVSARREYFKYR 942          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: XP_002177644.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50458.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 295.4 bits (755), Expect = 6.500e-76
Identity = 133/215 (61.86%), Postives = 174/215 (80.93%), Query Frame = 0
Query:  751 ERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSN-FKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQV 965
            ++R+P+VIAIGDVHGCI+EL+ L+++ +Y PGDL+VFLGDLV KGP+SI V+++AREIGA  VRGNH+ EVIRW +A+  G       SEH+ IA  L +AD++W+ +LPWY+S  +L  LFVHAGFV+  RL+KQ+PR M+NMRSIL DGTV+++++ ++PWAR W GPQTVLFGHDA RG+Q YE A+GLDTGCVYGG LTAC+LP K LV +
Sbjct:  908 KQRQPRVIAIGDVHGCIDELQDLLRQCDYRPGDLVVFLGDLVCKGPDSISVVQMAREIGAFGVRGNHDFEVIRWHQAIKSGVDPPVVGSEHFHIASCLSKADMKWMNSLPWYLSSKELGSLFVHAGFVSGIRLAKQNPRLMMNMRSILPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSL 1122          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: EJK69055.1 (hypothetical protein THAOC_09729 [Thalassiosira oceanica])

HSP 1 Score: 294.3 bits (752), Expect = 1.500e-75
Identity = 131/228 (57.46%), Postives = 175/228 (76.75%), Query Frame = 0
Query:  751 ERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSN-FKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNRYDR 978
            ++ +P+VI IGDVHGCI+EL+ L+KK  Y PGDL++FLGDLV KGP+S+ V+++AREIGA+ VRGNH+ EV+RW +A   GA      SEH+ ++  L+ AD++WL +LPWYI+ + L  LFVHAGFV+  RL+KQ+PR M+NMRSIL DGTV+++++ ++PWAR W GPQTV FGHDA RG+Q ++ A+GLDTGCVYGG LTAC+LP + LV V A   Y   R  R
Sbjct:  742 KQTQPRVIVIGDVHGCIDELQELLKKCNYSPGDLVLFLGDLVCKGPDSLSVVKMAREIGAIGVRGNHDFEVVRWHQARKSGADPPVIGSEHFYVSSSLDTADLKWLYSLPWYITSASLNSLFVHAGFVSGIRLAKQNPRLMMNMRSILPDGTVTSKFFNNWPWARLWDGPQTVFFGHDADRGLQQHDHAIGLDTGCVYGGKLTACILPERRLVSVNAKREYFSYRRKR 969          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: XP_002290389.1 (hypothetical protein THAPSDRAFT_268943 [Thalassiosira pseudonana CCMP1335] >EED92141.1 hypothetical protein THAPSDRAFT_268943 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 287.3 bits (734), Expect = 1.800e-73
Identity = 128/213 (60.09%), Postives = 166/213 (77.93%), Query Frame = 0
Query:  763 VHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSN-FKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNR 975
            VHGCI+EL+AL++K +Y PGDL+VFLGDLV KGP+S+ V+++AREIGA+ +RGNH+ EV+RW +A+  GA      SEHY +A  L  AD++W+ +LPW+IS S L  LFVHAGFV+  RL+KQ+PR M+NMRSIL DGTV+++++ ++PWAR W GPQTV FGHDA RG+Q YE A+GLDTGCVYGG LTAC+LP + LV V A   Y   R
Sbjct:  972 VHGCIDELQALLRKCDYHPGDLVVFLGDLVCKGPDSLSVVQMAREIGAIGIRGNHDFEVVRWHQAIKSGADPPVIGSEHYYVASALSTADLKWMYSLPWFISSSHLNALFVHAGFVSGIRLAKQNPRLMMNMRSILPDGTVTSKFFNNWPWARLWDGPQTVFFGHDADRGLQQYEHAIGLDTGCVYGGKLTACILPERRLVSVNAKREYFQYR 1184          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: CBJ31560.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 264.6 bits (675), Expect = 1.200e-66
Identity = 123/223 (55.16%), Postives = 159/223 (71.30%), Query Frame = 0
Query:  755 PKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFK--SEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSI-LADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNR 975
            P+++AIGDVHGC+ E++ L++K EY PGDLL+FLGDLVAKGP S  V+R ARE+G +SVRGNHE EV+RW   L +G   N +  S H+ IAM L E D  WL+N PWY  C +L  LFVHAGF+    + +Q+PR M+NMRS+ L  G  +++  ++ PWAR W GP TV FGHDA RG+Q  +QA+GLDTGCVYGG LTAC+LP + LV V +   Y+  R
Sbjct:  723 PRIVAIGDVHGCVNEMKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGVVRTARELGGVSVRGNHEFEVLRW---LNVGENENGRGPSAHHQIAMSLGEDDGLWLKNSPWYFQCEELDALFVHAGFIPGVSMKRQNPRMMMNMRSLTLEGGAPTSKVVENRPWAREWAGPDTVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACILPERRLVSVASKAAYMQYR 942          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: XP_005709338.1 (serine/threonine protein phosphatase [Galdieria sulphuraria] >EME32818.1 serine/threonine protein phosphatase [Galdieria sulphuraria])

HSP 1 Score: 256.5 bits (654), Expect = 3.400e-64
Identity = 120/227 (52.86%), Postives = 160/227 (70.48%), Query Frame = 0
Query:  753 REPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRAL--ALGAQSNFKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNRYDR 978
            + P+VI +GDVHGC++ELR L+K A++ PGD ++FLGDLVAKGP+S+ V+++AREIGA SVRGNH+ EVIRW  A    L    +   EH  IA  L+  D EWL + PW+I   +++ L VHAGFV    L +Q+PR M+NMRS+L +G ++ RY  D PWA  W+GP+TV++GHDA RG+Q +E A G+DTGCVYGG LTA +LP   L+ V A   Y  +RY R
Sbjct:  279 KNPRVIVVGDVHGCVDELRDLLKLADFRPGDQVIFLGDLVAKGPDSVAVVKIAREIGARSVRGNHDFEVIRWWNAQMNGLSGSISVNMEHLRIAQDLDREDHEWLFHCPWFIRIPEMKYLLVHAGFVPGVDLYQQNPRLMMNMRSVLPNGIITNRYVADSPWASYWKGPETVVYGHDAYRGLQQFEFAQGIDTGCVYGGRLTALLLPENRLISVRARRCY-RHRYSR 504          
BLAST of NO05G01590 vs. NCBI_GenBank
Match: XP_005535673.1 (similar to serine/threonine protein phosphatase [Cyanidioschyzon merolae strain 10D] >BAM79387.1 similar to serine/threonine protein phosphatase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 246.9 bits (629), Expect = 2.700e-61
Identity = 116/221 (52.49%), Postives = 156/221 (70.59%), Query Frame = 0
Query:  755 PKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFKS-EHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNR 975
            P+VIAIGDVHGCI EL+ L++  +Y PGD L+ LGDLVAKGP+S  V+++AREIGA +VRGNH++EVIR   A+  G   ++ S +H  IA  L + + EWLR+ PWYI   DL+ +FVHAGF  +    +Q PR M+N+RS+L +G  SAR+     WAR W+GP  V+FGHDA  G+Q +++ +GLDTGCVYGG LTA +LP   L+ VPA + Y+  R
Sbjct:  354 PRVIAIGDVHGCITELQDLLRVCDYRPGDELILLGDLVAKGPDSQAVVQMAREIGARAVRGNHDHEVIRCREAMMRGHDPSYASVDHQRIARQLSQQEHEWLRSCPWYIRSEDLETVFVHAGFQPDVPFEEQLPRHMMNLRSVLENGAPSARHSNGMAWARLWKGPLRVVFGHDAYMGLQLWDKCIGLDTGCVYGGRLTALLLPENRLISVPARKMYVAPR 574          
The following BLAST results are available for this feature:
BLAST of NO05G01590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28143.12.400e-20384.56serine threonine protein [Nannochloropsis gaditana... [more]
XP_005853580.11.500e-17383.56serine threonine protein, partial [Nannochloropsis... [more]
GAX23238.12.800e-7961.78hypothetical protein FisN_21Hh079 [Fistulifera sol... [more]
GAX26610.13.700e-7961.33hypothetical protein FisN_21Lh079 [Fistulifera sol... [more]
XP_002177644.16.500e-7661.86predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK69055.11.500e-7557.46hypothetical protein THAOC_09729 [Thalassiosira oc... [more]
XP_002290389.11.800e-7360.09hypothetical protein THAPSDRAFT_268943 [Thalassios... [more]
CBJ31560.11.200e-6655.16conserved unknown protein [Ectocarpus siliculosus][more]
XP_005709338.13.400e-6452.86serine/threonine protein phosphatase [Galdieria su... [more]
XP_005535673.12.700e-6152.49similar to serine/threonine protein phosphatase [C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003712NSK003712Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01590.1NO05G01590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583923gene_2947Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g82gene2340Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01590.1NO05G01590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01590 ID=NO05G01590|Name=NO05G01590|organism=Nannochloropsis oceanica|type=gene|length=3514bp
ATGGAATTGAGgtacgtgtaattgcgtgataggtgaaatgtatacatccc
ttcaggaggggcgacagtttacattgacctggcctcctctccattccttc
cttctacccctgccgcctcccgcccgctagGTGGTCTAGGCAATCGCCCG
GGCGCCAGGGGTTGTGTCATTGCCTCCTCGTGTTGTTGGCGACCACATTA
TGGTGCGGCTGGAGAATAGAGCAGACGCAGGGCTGGGGCGGCGTTGGGAC
AGGACCTGCCTACCAACCGCCACCACGTCCTGCTTCCTCCTCTTCATCCT
CCTCGTCCTTCTCTTCCTGCTCCGAGTACTCGTCTTCTTCACCATGGAGA
ATGAGAAAAAGAGAGCATGGGATATCCTCGTCATTTTGGGACGGGTGGAG
TGGCAGTAGCAGCAAAAGGAAATTGCCGCTTTGCTTGCTTCATGCGGAGC
CGACAGGAAGCTGTAGTGGAGAGGTAGGAGCAGGGGGAGCAAGTAACAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGACAATCAAAG
TAGAATAAAAGGAGATGCACGGAGGCCGGGAGCCCGCAAACTAGGCGGGC
ATGTAAACCGTGGGCGACCACAGCAGCAGCAGCAGCGGCAGCAGCCGGAC
CAGCAAACTTTTGTAGATAGCAGCAGTAGTAAGAGTAAGAGTGTGACAAG
CAGCATCAGCAGCAGCAGCAGTAGCAATAACTCATCATCTCCACCACCTT
TCAATGGAGGACGAGGTGGAGGCGGCGAAAAGAGAGGGAACCAGCAGAAG
CAGCAGAAGCAGCAGCAGCTCCACCACCAGCGTGGGCAGCAGCAACCACC
ACAAAGGCATAAACCGAGATCATCTCCCCCAAGACGCCCCTCTTTGTCTC
TCCCCTCGTCTTCCCCCTCTTCTTCTCCTTCTCCCCCTTTCTCTCGTTCA
TCATCACCACCACCCGTCGCCGCCCGGGCCATGCTCCAACCCACGCCCCC
AGGAGCAGAGGATGCTGAGTCCCTCTCTGACTTCACGCGTCTGTGTAAGG
TCCTAAGCATGAGTGCTGATGACTATCCGGACACCCAAGAAGAGCTCGCG
CAGGTATTTGGAGGTAGCGGTGGTAGTAGCAGTAGCAGCAGCCGTTCACC
TGTCGCGTCCTCCTCCCCTCCCTCACCGTCTGTGGTTAGAAGCAGCAGCA
GCAGCAGCAGCAGCAGTAGCAGCAGCAGAAGAAGAAATAGGAGCAGCAGT
AGTAATAGTAAATCTCGGCTGCCTCCCATCCGCTTGCCGCTGACGGAGCA
AGTAAGTGAAGCAGAGGCTGATGCCGCCGCGGCGGCGGCAGCAGCAGCAG
CAGCAGCACCAGCACCAGCACCAGCAGCAGCAGCACCAGTAGCAGCACGA
GCACCGATGGCAAACGGAAATGTGGTTCGATCATCTGCTCGACGGGTCTA
TGGTAATTTTGACAATAATTACAATCCCCATCGAAGCGGAGGAGAACGAG
GAGCTGAAGGCCCACCATCTTTTCGACGGCAAGTGCAGTCGCAACAGCAT
TCGCAGATGCAGCAGCAGCAGCGGGGGCGACATCAGGGAGAAGGGATGGA
AGAAGGAAAATCGGGGGAAGAAATTTTGGCCCCGAGGGAAATGCTGGGTC
TGCGGAAGCGTCATCCTGCTGCGCGCTCTGTTGCCGCGTCTGCTGCAGCA
GGGGAGAGTGACAGCAGTCCTGCGCCGCCAAGGAGAGAGCAGCAAAGAGA
CGGAGGACGAGGGGGGGGAGAAGAAGCAAATCGTCGGGCAGCAGCTGCAG
CAGCCGACGAGGATGAGGAAGCCAGCGACGAGGAGGATTTTGCTTTGGGC
GACAACACCACCGCAGCCACCACCGGCAATAGGAATAGCAACAACATCAA
CAACAACATCAGCAACGAGAATAACGACAACGTTTTGAAAGACCGTCGTG
TCGTGTCGAGCCAAATAAAAGATACGAAATTGACTGAGTACATCAAGGAC
AAGAAGAAAGCGCGTTCCACCCGTGACCGTTTCCTGGCCGACACTGGCTT
GGTCCGCAGCGAAGTCCACCCTCCACAGCGCTTCATCGAAGTGTATTACA
ACTCGTGGGCGGACGATTTTTACACGGCTATCACCACAAGTTCTTCGTGT
TTTGGCCCTCGGTGGTGGTTTAGGGAAGCCTTGGGGCACGACCCTCATGA
AGTGATGGCATGGGTCAGGGAGTGGGAGACAAAGGCACGAAAACATGATG
TGTTATCAGAGGGGGTAGAGAGGGTGATTCGGGAGGCGATGGAGGTGGGG
GGATCGGGAGAAGAGGACAATCCAAGTGTGGAGACAGAGAGGTTCTTGGC
GTTGAAGGCCCGATTAAGGGAGAGGAGGGAGCCGAAGGTAATAGCGATTG
GCGATGTGCATGGGTGTATCGAGGAGTTGCGAGCACTAATCAAAAAAGCA
GAGTATGGTCCCGGGGACTTGCTTGTATTTTTGGGGGACTTGGTGGCGAA
AGGTCCGGAAAGCATTCAAGTTATCAGATTGGCGAGGGAGATTGGGGCGT
TGTCAGTGAGGGGGAATCATGAGAATGAGGTGATTAGGTGGAGTCGGGCT
CTGGCTTTGGGGGCTCAGAGTAACTTTAAGAGTGAACATTATTTGATTGC
CATGGGATTGGAAGAGGCGGATGTGGAATGGCTGCGAAATTTACCCTGGT
ATATCTCATGCTCGGACTTACAATTGTTGTTCGTCCATGCGGGGTTTGTT
GCGAATCAACGCTTGTCGAAGCAGCATCCGAGGTTCATGATTAACATGAG
GTCGATTTTGGCTGATGGGACCGTGAGTGCACGATATTATCAAGATTATC
CGTGGGCGAGGACGTGGCAAGGGCCCCAGACTGTGTTGTTCGGCCATGAT
GCGCGAAGGGGGATGCAAGACTACGAACAGGCCTTGGGTTTGGACACCGG
CTGTGTGTATGGCGGTAATTTGACGGCGTGTGTGCTTCCAGGGAAGGAGT
TGGTGCAGGTCCCGGCGGCGGAGCCGTATATCGTGAATCGCTATGACAGG
ATCATGAAAAGGGCGCAGATGCTTCAGAAGGAGGGGCTGGGTGGAGGGGA
GGGTGGCGGAGTGGAGATTGAAGGAGGAGGGAAGAAGTAGCAGTAGGGAG
GGAGGGAGGAAAGAGGAGCGAAGAAGTAGTAGATATGAAGGGAAGAGGAG
AGAGGGAGGATCCCTCTCTCCCTTTTGTAAGTATGAACGATAAACAGCGA
CAACAAGAATCTGATTGGAACATGGAGCAGGAAAGTTGGAGAGGATCGAA
ACCAGGAAAAAGTAATAGCCGTTTCTGGGGACGCCTCTCTATTTCCCTCT
TGCCGCGATATTTCTCGTTCCTTTCCTATGGAAGGCCGAGCGAGAAACAG
TGGGGTGGCGTGGGTGCTTGCTTTATCAAGTTAAATCAATCGAAGGGGTT
TCGGTAACACCATGAGATCTAGAAGATTGAAAAATGGAAAAAAAACGATG
GGCGGAATTCGAAG
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protein sequence of NO05G01590.1

>NO05G01590.1-protein ID=NO05G01590.1-protein|Name=NO05G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1007bp
MELRWSRQSPGRQGLCHCLLVLLATTLWCGWRIEQTQGWGGVGTGPAYQP
PPRPASSSSSSSSFSSCSEYSSSSPWRMRKREHGISSSFWDGWSGSSSKR
KLPLCLLHAEPTGSCSGEVGAGGASNSSSSSSSSSSSSSSDNQSRIKGDA
RRPGARKLGGHVNRGRPQQQQQRQQPDQQTFVDSSSSKSKSVTSSISSSS
SSNNSSSPPPFNGGRGGGGEKRGNQQKQQKQQQLHHQRGQQQPPQRHKPR
SSPPRRPSLSLPSSSPSSSPSPPFSRSSSPPPVAARAMLQPTPPGAEDAE
SLSDFTRLCKVLSMSADDYPDTQEELAQVFGGSGGSSSSSSRSPVASSSP
PSPSVVRSSSSSSSSSSSSRRRNRSSSSNSKSRLPPIRLPLTEQVSEAEA
DAAAAAAAAAAAAPAPAPAAAAPVAARAPMANGNVVRSSARRVYGNFDNN
YNPHRSGGERGAEGPPSFRRQVQSQQHSQMQQQQRGRHQGEGMEEGKSGE
EILAPREMLGLRKRHPAARSVAASAAAGESDSSPAPPRREQQRDGGRGGG
EEANRRAAAAAADEDEEASDEEDFALGDNTTAATTGNRNSNNINNNISNE
NNDNVLKDRRVVSSQIKDTKLTEYIKDKKKARSTRDRFLADTGLVRSEVH
PPQRFIEVYYNSWADDFYTAITTSSSCFGPRWWFREALGHDPHEVMAWVR
EWETKARKHDVLSEGVERVIREAMEVGGSGEEDNPSVETERFLALKARLR
ERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQ
VIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEEA
DVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADG
TVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGN
LTACVLPGKELVQVPAAEPYIVNRYDRIMKRAQMLQKEGLGGGEGGGVEI
EGGGKK*
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Synonyms
Publications