NO05G01590.1, NO05G01590.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G01590.1
Unique Name	NO05G01590.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3395
Alignment location	chr5:440712..444225 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:440712..444225 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G01590.1 vs.
Match: EWM28143.1 (serine threonine protein [Nannochloropsis gaditana])

HSP 1 Score: 776.9 bits (2005), Expect = 7.400e-221
Identity = 521/898 (58.02%), Postives = 585/898 (65.14%), Query Frame = 0

Query:  164 RGRPQQQQQRQQPDQQTFVDSSSSKSKSV-TSSISSSSSSNNSSSPPPFNGGR-----GGGGEKRGNQQKQQKQQQLHHQRGQQQPPQRHKPRSSPPRRPSLSLPSSSPSSSPSPPFSRSSSPPPVAARAMLQPTPPGAEDAESLSDFTRLCKVLSMSADDYPDTQEELAQVFGGSGGSSSSSSRSPVASSSPPSPSVVRSSSSSSSSSSSSRRRNRSSSSNSKSRLPPIRLPLTEQVSEAEADAAAAAAAAAAAAPAPAPAAAAPVAARAPMANGNVVRSSARRVYGNFDNNYNPHRSGGERGA--EGPP-----------SFRRQVQSQQHSQMQQQQRGRHQGEG-MEEGKSGEEILAPREMLGLRKRHPAARSVAAS-----AAAGESDS-------SPAPPRREQQRDGGRGGGEEANRRAAAAAADEDEEASDEEDFALGDNTT--AATTGNRNSNNINNNISNENNDNVLKDRRVVSSQIKDTKLTEYIKDKKKARSTRDRFLADTGLVRSEVHPPQRFIEVYYNSWADDFYTAITTSSSCFGPRWWFREALGHDPHEVMAWVREWETKARKHDVLSEGVERVIREAMEVGGSGEEDNPSVETERFLALKARLRERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQVIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEEADVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGNLTACVLPGKELVQVPAAEPYIVNRYDRIMKRAQMLQKEGLGG----------------GEG------GGVEIEGGGK 1006
            RG  + ++    P   + V   S+  ++  T    +S  S +   P    GG      G  G  R   Q+Q++ + +   RG        + +S PP              SPSP   RSS+ PP A+R   +P PP  EDAE+LSDF RLCK LSMSA DYP T E LA VFG             +A SSPP    +R +  +S        R  S    +++  PPIRLPLT +V+E EA AA AAA +   AP P          +         R  AR VYG F      HR G +R A   G P           S R Q Q  +  ++Q+   G   GEG  EEG+ GEE+LAP E LGLRKRHP AR+ AA         GE D        +P   R E     GR G          AAADEDEEASDEED AL           G R  +           + VL+D RVVSS IKD KLTEYIKDKKKARS+RDRFLADTGLVRSEVHPPQRFIEVYYNSWADDFYTAITTSS+ FGPRWWFREALG +P EVMAWVREWE +ARKH VLSEGV  V++EAM VGG+ EE NP+VE ERFLALKARLRERREPK+I IGDVHGC+EELRALIKK EY PGDLLVFLGD+VAKGP+SI VIRLARE+GALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLE+ADVEWLRNLPWYISCSDLQLLFVHAGFVA+QRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQ+YEQALGLDTGCVYGGNLTAC+LPGKELVQVPAAEPYIVNRYDRIMKRA++LQKEG+GG                GEG      GG E E GG+
Sbjct:   28 RGGGRGREHGDFPPSDSIVQEGSAMHRAPGTGGARASGESGHGRGPGTDQGGAPDARPGDTGGPRPRPQQQERGKHVSLDRGAGSASPLSRAQSLPP--------------SPSP---RSSTSPPAASRPA-RPEPPREEDAEALSDFARLCKALSMSAKDYPGTDEGLALVFG----------PDTLALSSPPPSLPLRPAGKASGFG----ERISSPGRTARAGPPPIRLPLTNEVTEMEAQAAEAAAGSGPPAP-PRGYGGEDGGGKKEAPR----RVPARSVYGAF----YKHREGRDREAPDAGRPRGSLGGRLSLSSPRVQQQRWKEGRLQEDSEGEGLGEGEEEEGRVGEEVLAPMESLGLRKRHPPARTAAAGDRGARHRGGEGDGGEGTEGRAPWQGREESGEKWGRSG-----ELGGEAAADEDEEASDEEDLALAGPGPGGGGLKGRRRGSGPAPVDPARTEEKVLRDCRVVSSHIKDAKLTEYIKDKKKARSSRDRFLADTGLVRSEVHPPQRFIEVYYNSWADDFYTAITTSSAAFGPRWWFREALGQEPQEVMAWVREWEAQARKHQVLSEGVGEVLKEAMAVGGA-EEGNPTVEMERFLALKARLRERREPKIIVIGDVHGCVEELRALIKKVEYSPGDLLVFLGDMVAKGPDSIPVIRLAREVGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEDADVEWLRNLPWYISCSDLQLLFVHAGFVADQRLSKQHPRFMINMRSILADGTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQEYEQALGLDTGCVYGGNLTACILPGKELVQVPAAEPYIVNRYDRIMKRARVLQKEGVGGRRWTDGEEMDLEEIAAGEGMEGDEDGGTEGEQGGR 878

The following BLAST results are available for this feature:

BLAST of NO05G01590.1 vs.

BLAST of NO05G01590.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28143.1	7.400e-221	58.02	serine threonine protein [Nannochloropsis gaditana...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G01590	NO05G01590	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01590.1	NO05G01590.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01590.1.cds1	NO05G01590.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01590.1.cds2	NO05G01590.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:440712..444225+
coding sequence from alignment at chr5:440712..444225+

mRNA sequence

>NO05G01590.1 ID=NO05G01590.1|Name=NO05G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=3395bp
ATGGAATTGAGGTGGTCTAGGCAATCGCCCGGGCGCCAGGGGTTGTGTCA
TTGCCTCCTCGTGTTGTTGGCGACCACATTATGGTGCGGCTGGAGAATAG
AGCAGACGCAGGGCTGGGGCGGCGTTGGGACAGGACCTGCCTACCAACCG
CCACCACGTCCTGCTTCCTCCTCTTCATCCTCCTCGTCCTTCTCTTCCTG
CTCCGAGTACTCGTCTTCTTCACCATGGAGAATGAGAAAAAGAGAGCATG
GGATATCCTCGTCATTTTGGGACGGGTGGAGTGGCAGTAGCAGCAAAAGG
AAATTGCCGCTTTGCTTGCTTCATGCGGAGCCGACAGGAAGCTGTAGTGG
AGAGGTAGGAGCAGGGGGAGCAAGTAACAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCGACAATCAAAGTAGAATAAAAGGAGATGCA
CGGAGGCCGGGAGCCCGCAAACTAGGCGGGCATGTAAACCGTGGGCGACC
ACAGCAGCAGCAGCAGCGGCAGCAGCCGGACCAGCAAACTTTTGTAGATA
GCAGCAGTAGTAAGAGTAAGAGTGTGACAAGCAGCATCAGCAGCAGCAGC
AGTAGCAATAACTCATCATCTCCACCACCTTTCAATGGAGGACGAGGTGG
AGGCGGCGAAAAGAGAGGGAACCAGCAGAAGCAGCAGAAGCAGCAGCAGC
TCCACCACCAGCGTGGGCAGCAGCAACCACCACAAAGGCATAAACCGAGA
TCATCTCCCCCAAGACGCCCCTCTTTGTCTCTCCCCTCGTCTTCCCCCTC
TTCTTCTCCTTCTCCCCCTTTCTCTCGTTCATCATCACCACCACCCGTCG
CCGCCCGGGCCATGCTCCAACCCACGCCCCCAGGAGCAGAGGATGCTGAG
TCCCTCTCTGACTTCACGCGTCTGTGTAAGGTCCTAAGCATGAGTGCTGA
TGACTATCCGGACACCCAAGAAGAGCTCGCGCAGGTATTTGGAGGTAGCG
GTGGTAGTAGCAGTAGCAGCAGCCGTTCACCTGTCGCGTCCTCCTCCCCT
CCCTCACCGTCTGTGGTTAGAAGCAGCAGCAGCAGCAGCAGCAGCAGTAG
CAGCAGCAGAAGAAGAAATAGGAGCAGCAGTAGTAATAGTAAATCTCGGC
TGCCTCCCATCCGCTTGCCGCTGACGGAGCAAGTAAGTGAAGCAGAGGCT
GATGCCGCCGCGGCGGCGGCAGCAGCAGCAGCAGCAGCACCAGCACCAGC
ACCAGCAGCAGCAGCACCAGTAGCAGCACGAGCACCGATGGCAAACGGAA
ATGTGGTTCGATCATCTGCTCGACGGGTCTATGGTAATTTTGACAATAAT
TACAATCCCCATCGAAGCGGAGGAGAACGAGGAGCTGAAGGCCCACCATC
TTTTCGACGGCAAGTGCAGTCGCAACAGCATTCGCAGATGCAGCAGCAGC
AGCGGGGGCGACATCAGGGAGAAGGGATGGAAGAAGGAAAATCGGGGGAA
GAAATTTTGGCCCCGAGGGAAATGCTGGGTCTGCGGAAGCGTCATCCTGC
TGCGCGCTCTGTTGCCGCGTCTGCTGCAGCAGGGGAGAGTGACAGCAGTC
CTGCGCCGCCAAGGAGAGAGCAGCAAAGAGACGGAGGACGAGGGGGGGGA
GAAGAAGCAAATCGTCGGGCAGCAGCTGCAGCAGCCGACGAGGATGAGGA
AGCCAGCGACGAGGAGGATTTTGCTTTGGGCGACAACACCACCGCAGCCA
CCACCGGCAATAGGAATAGCAACAACATCAACAACAACATCAGCAACGAG
AATAACGACAACGTTTTGAAAGACCGTCGTGTCGTGTCGAGCCAAATAAA
AGATACGAAATTGACTGAGTACATCAAGGACAAGAAGAAAGCGCGTTCCA
CCCGTGACCGTTTCCTGGCCGACACTGGCTTGGTCCGCAGCGAAGTCCAC
CCTCCACAGCGCTTCATCGAAGTGTATTACAACTCGTGGGCGGACGATTT
TTACACGGCTATCACCACAAGTTCTTCGTGTTTTGGCCCTCGGTGGTGGT
TTAGGGAAGCCTTGGGGCACGACCCTCATGAAGTGATGGCATGGGTCAGG
GAGTGGGAGACAAAGGCACGAAAACATGATGTGTTATCAGAGGGGGTAGA
GAGGGTGATTCGGGAGGCGATGGAGGTGGGGGGATCGGGAGAAGAGGACA
ATCCAAGTGTGGAGACAGAGAGGTTCTTGGCGTTGAAGGCCCGATTAAGG
GAGAGGAGGGAGCCGAAGGTAATAGCGATTGGCGATGTGCATGGGTGTAT
CGAGGAGTTGCGAGCACTAATCAAAAAAGCAGAGTATGGTCCCGGGGACT
TGCTTGTATTTTTGGGGGACTTGGTGGCGAAAGGTCCGGAAAGCATTCAA
GTTATCAGATTGGCGAGGGAGATTGGGGCGTTGTCAGTGAGGGGGAATCA
TGAGAATGAGGTGATTAGGTGGAGTCGGGCTCTGGCTTTGGGGGCTCAGA
GTAACTTTAAGAGTGAACATTATTTGATTGCCATGGGATTGGAAGAGGCG
GATGTGGAATGGCTGCGAAATTTACCCTGGTATATCTCATGCTCGGACTT
ACAATTGTTGTTCGTCCATGCGGGGTTTGTTGCGAATCAACGCTTGTCGA
AGCAGCATCCGAGGTTCATGATTAACATGAGGTCGATTTTGGCTGATGGG
ACCGTGAGTGCACGATATTATCAAGATTATCCGTGGGCGAGGACGTGGCA
AGGGCCCCAGACTGTGTTGTTCGGCCATGATGCGCGAAGGGGGATGCAAG
ACTACGAACAGGCCTTGGGTTTGGACACCGGCTGTGTGTATGGCGGTAAT
TTGACGGCGTGTGTGCTTCCAGGGAAGGAGTTGGTGCAGGTCCCGGCGGC
GGAGCCGTATATCGTGAATCGCTATGACAGGATCATGAAAAGGGCGCAGA
TGCTTCAGAAGGAGGGGCTGGGTGGAGGGGAGGGTGGCGGAGTGGAGATT
GAAGGAGGAGGGAAGAAGTAGCAGTAGGGAGGGAGGGAGGAAAGAGGAGC
GAAGAAGTAGTAGATATGAAGGGAAGAGGAGAGAGGGAGGATCCCTCTCT
CCCTTTTGTAAGTATGAACGATAAACAGCGACAACAAGAATCTGATTGGA
ACATGGAGCAGGAAAGTTGGAGAGGATCGAAACCAGGAAAAAGTAATAGC
CGTTTCTGGGGACGCCTCTCTATTTCCCTCTTGCCGCGATATTTCTCGTT
CCTTTCCTATGGAAGGCCGAGCGAGAAACAGTGGGGTGGCGTGGGTGCTT
GCTTTATCAAGTTAAATCAATCGAAGGGGTTTCGGTAACACCATGAGATC
TAGAAGATTGAAAAATGGAAAAAAAACGATGGGCGGAATTCGAAG

protein sequence of NO05G01590.1

>NO05G01590.1-protein ID=NO05G01590.1-protein|Name=NO05G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1007bp
MELRWSRQSPGRQGLCHCLLVLLATTLWCGWRIEQTQGWGGVGTGPAYQP
PPRPASSSSSSSSFSSCSEYSSSSPWRMRKREHGISSSFWDGWSGSSSKR
KLPLCLLHAEPTGSCSGEVGAGGASNSSSSSSSSSSSSSSDNQSRIKGDA
RRPGARKLGGHVNRGRPQQQQQRQQPDQQTFVDSSSSKSKSVTSSISSSS
SSNNSSSPPPFNGGRGGGGEKRGNQQKQQKQQQLHHQRGQQQPPQRHKPR
SSPPRRPSLSLPSSSPSSSPSPPFSRSSSPPPVAARAMLQPTPPGAEDAE
SLSDFTRLCKVLSMSADDYPDTQEELAQVFGGSGGSSSSSSRSPVASSSP
PSPSVVRSSSSSSSSSSSSRRRNRSSSSNSKSRLPPIRLPLTEQVSEAEA
DAAAAAAAAAAAAPAPAPAAAAPVAARAPMANGNVVRSSARRVYGNFDNN
YNPHRSGGERGAEGPPSFRRQVQSQQHSQMQQQQRGRHQGEGMEEGKSGE
EILAPREMLGLRKRHPAARSVAASAAAGESDSSPAPPRREQQRDGGRGGG
EEANRRAAAAAADEDEEASDEEDFALGDNTTAATTGNRNSNNINNNISNE
NNDNVLKDRRVVSSQIKDTKLTEYIKDKKKARSTRDRFLADTGLVRSEVH
PPQRFIEVYYNSWADDFYTAITTSSSCFGPRWWFREALGHDPHEVMAWVR
EWETKARKHDVLSEGVERVIREAMEVGGSGEEDNPSVETERFLALKARLR
ERREPKVIAIGDVHGCIEELRALIKKAEYGPGDLLVFLGDLVAKGPESIQ
VIRLAREIGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLEEA
DVEWLRNLPWYISCSDLQLLFVHAGFVANQRLSKQHPRFMINMRSILADG
TVSARYYQDYPWARTWQGPQTVLFGHDARRGMQDYEQALGLDTGCVYGGN
LTACVLPGKELVQVPAAEPYIVNRYDRIMKRAQMLQKEGLGGGEGGGVEI
EGGGKK*

mRNA from alignment at chr5:440712..444225+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G01590.1 ID=NO05G01590.1|Name=NO05G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=3514bp|location=Sequence derived from alignment at chr5:440712..444225+ (Nannochloropsis oceanica)
ATGGAATTGAGGTACGTGTAATTGCGTGATAGGTGAAATGTATACATCCC
TTCAGGAGGGGCGACAGTTTACATTGACCTGGCCTCCTCTCCATTCCTTC
CTTCTACCCCTGCCGCCTCCCGCCCGCTAGGTGGTCTAGGCAATCGCCCG
GGCGCCAGGGGTTGTGTCATTGCCTCCTCGTGTTGTTGGCGACCACATTA
TGGTGCGGCTGGAGAATAGAGCAGACGCAGGGCTGGGGCGGCGTTGGGAC
AGGACCTGCCTACCAACCGCCACCACGTCCTGCTTCCTCCTCTTCATCCT
CCTCGTCCTTCTCTTCCTGCTCCGAGTACTCGTCTTCTTCACCATGGAGA
ATGAGAAAAAGAGAGCATGGGATATCCTCGTCATTTTGGGACGGGTGGAG
TGGCAGTAGCAGCAAAAGGAAATTGCCGCTTTGCTTGCTTCATGCGGAGC
CGACAGGAAGCTGTAGTGGAGAGGTAGGAGCAGGGGGAGCAAGTAACAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGACAATCAAAG
TAGAATAAAAGGAGATGCACGGAGGCCGGGAGCCCGCAAACTAGGCGGGC
ATGTAAACCGTGGGCGACCACAGCAGCAGCAGCAGCGGCAGCAGCCGGAC
CAGCAAACTTTTGTAGATAGCAGCAGTAGTAAGAGTAAGAGTGTGACAAG
CAGCATCAGCAGCAGCAGCAGTAGCAATAACTCATCATCTCCACCACCTT
TCAATGGAGGACGAGGTGGAGGCGGCGAAAAGAGAGGGAACCAGCAGAAG
CAGCAGAAGCAGCAGCAGCTCCACCACCAGCGTGGGCAGCAGCAACCACC
ACAAAGGCATAAACCGAGATCATCTCCCCCAAGACGCCCCTCTTTGTCTC
TCCCCTCGTCTTCCCCCTCTTCTTCTCCTTCTCCCCCTTTCTCTCGTTCA
TCATCACCACCACCCGTCGCCGCCCGGGCCATGCTCCAACCCACGCCCCC
AGGAGCAGAGGATGCTGAGTCCCTCTCTGACTTCACGCGTCTGTGTAAGG
TCCTAAGCATGAGTGCTGATGACTATCCGGACACCCAAGAAGAGCTCGCG
CAGGTATTTGGAGGTAGCGGTGGTAGTAGCAGTAGCAGCAGCCGTTCACC
TGTCGCGTCCTCCTCCCCTCCCTCACCGTCTGTGGTTAGAAGCAGCAGCA
GCAGCAGCAGCAGCAGTAGCAGCAGCAGAAGAAGAAATAGGAGCAGCAGT
AGTAATAGTAAATCTCGGCTGCCTCCCATCCGCTTGCCGCTGACGGAGCA
AGTAAGTGAAGCAGAGGCTGATGCCGCCGCGGCGGCGGCAGCAGCAGCAG
CAGCAGCACCAGCACCAGCACCAGCAGCAGCAGCACCAGTAGCAGCACGA
GCACCGATGGCAAACGGAAATGTGGTTCGATCATCTGCTCGACGGGTCTA
TGGTAATTTTGACAATAATTACAATCCCCATCGAAGCGGAGGAGAACGAG
GAGCTGAAGGCCCACCATCTTTTCGACGGCAAGTGCAGTCGCAACAGCAT
TCGCAGATGCAGCAGCAGCAGCGGGGGCGACATCAGGGAGAAGGGATGGA
AGAAGGAAAATCGGGGGAAGAAATTTTGGCCCCGAGGGAAATGCTGGGTC
TGCGGAAGCGTCATCCTGCTGCGCGCTCTGTTGCCGCGTCTGCTGCAGCA
GGGGAGAGTGACAGCAGTCCTGCGCCGCCAAGGAGAGAGCAGCAAAGAGA
CGGAGGACGAGGGGGGGGAGAAGAAGCAAATCGTCGGGCAGCAGCTGCAG
CAGCCGACGAGGATGAGGAAGCCAGCGACGAGGAGGATTTTGCTTTGGGC
GACAACACCACCGCAGCCACCACCGGCAATAGGAATAGCAACAACATCAA
CAACAACATCAGCAACGAGAATAACGACAACGTTTTGAAAGACCGTCGTG
TCGTGTCGAGCCAAATAAAAGATACGAAATTGACTGAGTACATCAAGGAC
AAGAAGAAAGCGCGTTCCACCCGTGACCGTTTCCTGGCCGACACTGGCTT
GGTCCGCAGCGAAGTCCACCCTCCACAGCGCTTCATCGAAGTGTATTACA
ACTCGTGGGCGGACGATTTTTACACGGCTATCACCACAAGTTCTTCGTGT
TTTGGCCCTCGGTGGTGGTTTAGGGAAGCCTTGGGGCACGACCCTCATGA
AGTGATGGCATGGGTCAGGGAGTGGGAGACAAAGGCACGAAAACATGATG
TGTTATCAGAGGGGGTAGAGAGGGTGATTCGGGAGGCGATGGAGGTGGGG
GGATCGGGAGAAGAGGACAATCCAAGTGTGGAGACAGAGAGGTTCTTGGC
GTTGAAGGCCCGATTAAGGGAGAGGAGGGAGCCGAAGGTAATAGCGATTG
GCGATGTGCATGGGTGTATCGAGGAGTTGCGAGCACTAATCAAAAAAGCA
GAGTATGGTCCCGGGGACTTGCTTGTATTTTTGGGGGACTTGGTGGCGAA
AGGTCCGGAAAGCATTCAAGTTATCAGATTGGCGAGGGAGATTGGGGCGT
TGTCAGTGAGGGGGAATCATGAGAATGAGGTGATTAGGTGGAGTCGGGCT
CTGGCTTTGGGGGCTCAGAGTAACTTTAAGAGTGAACATTATTTGATTGC
CATGGGATTGGAAGAGGCGGATGTGGAATGGCTGCGAAATTTACCCTGGT
ATATCTCATGCTCGGACTTACAATTGTTGTTCGTCCATGCGGGGTTTGTT
GCGAATCAACGCTTGTCGAAGCAGCATCCGAGGTTCATGATTAACATGAG
GTCGATTTTGGCTGATGGGACCGTGAGTGCACGATATTATCAAGATTATC
CGTGGGCGAGGACGTGGCAAGGGCCCCAGACTGTGTTGTTCGGCCATGAT
GCGCGAAGGGGGATGCAAGACTACGAACAGGCCTTGGGTTTGGACACCGG
CTGTGTGTATGGCGGTAATTTGACGGCGTGTGTGCTTCCAGGGAAGGAGT
TGGTGCAGGTCCCGGCGGCGGAGCCGTATATCGTGAATCGCTATGACAGG
ATCATGAAAAGGGCGCAGATGCTTCAGAAGGAGGGGCTGGGTGGAGGGGA
GGGTGGCGGAGTGGAGATTGAAGGAGGAGGGAAGAAGTAGCAGTAGGGAG
GGAGGGAGGAAAGAGGAGCGAAGAAGTAGTAGATATGAAGGGAAGAGGAG
AGAGGGAGGATCCCTCTCTCCCTTTTGTAAGTATGAACGATAAACAGCGA
CAACAAGAATCTGATTGGAACATGGAGCAGGAAAGTTGGAGAGGATCGAA
ACCAGGAAAAAGTAATAGCCGTTTCTGGGGACGCCTCTCTATTTCCCTCT
TGCCGCGATATTTCTCGTTCCTTTCCTATGGAAGGCCGAGCGAGAAACAG
TGGGGTGGCGTGGGTGCTTGCTTTATCAAGTTAAATCAATCGAAGGGGTT
TCGGTAACACCATGAGATCTAGAAGATTGAAAAATGGAAAAAAAACGATG
GGCGGAATTCGAAG

Coding sequence (CDS) from alignment at chr5:440712..444225+

>NO05G01590.1 ID=NO05G01590.1|Name=NO05G01590.1|organism=Nannochloropsis oceanica|type=CDS|length=3021bp|location=Sequence derived from alignment at chr5:440712..444225+ (Nannochloropsis oceanica)
ATGGAATTGAGGTGGTCTAGGCAATCGCCCGGGCGCCAGGGGTTGTGTCA
TTGCCTCCTCGTGTTGTTGGCGACCACATTATGGTGCGGCTGGAGAATAG
AGCAGACGCAGGGCTGGGGCGGCGTTGGGACAGGACCTGCCTACCAACCG
CCACCACGTCCTGCTTCCTCCTCTTCATCCTCCTCGTCCTTCTCTTCCTG
CTCCGAGTACTCGTCTTCTTCACCATGGAGAATGAGAAAAAGAGAGCATG
GGATATCCTCGTCATTTTGGGACGGGTGGAGTGGCAGTAGCAGCAAAAGG
AAATTGCCGCTTTGCTTGCTTCATGCGGAGCCGACAGGAAGCTGTAGTGG
AGAGGTAGGAGCAGGGGGAGCAAGTAACAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCGACAATCAAAGTAGAATAAAAGGAGATGCA
CGGAGGCCGGGAGCCCGCAAACTAGGCGGGCATGTAAACCGTGGGCGACC
ACAGCAGCAGCAGCAGCGGCAGCAGCCGGACCAGCAAACTTTTGTAGATA
GCAGCAGTAGTAAGAGTAAGAGTGTGACAAGCAGCATCAGCAGCAGCAGC
AGTAGCAATAACTCATCATCTCCACCACCTTTCAATGGAGGACGAGGTGG
AGGCGGCGAAAAGAGAGGGAACCAGCAGAAGCAGCAGAAGCAGCAGCAGC
TCCACCACCAGCGTGGGCAGCAGCAACCACCACAAAGGCATAAACCGAGA
TCATCTCCCCCAAGACGCCCCTCTTTGTCTCTCCCCTCGTCTTCCCCCTC
TTCTTCTCCTTCTCCCCCTTTCTCTCGTTCATCATCACCACCACCCGTCG
CCGCCCGGGCCATGCTCCAACCCACGCCCCCAGGAGCAGAGGATGCTGAG
TCCCTCTCTGACTTCACGCGTCTGTGTAAGGTCCTAAGCATGAGTGCTGA
TGACTATCCGGACACCCAAGAAGAGCTCGCGCAGGTATTTGGAGGTAGCG
GTGGTAGTAGCAGTAGCAGCAGCCGTTCACCTGTCGCGTCCTCCTCCCCT
CCCTCACCGTCTGTGGTTAGAAGCAGCAGCAGCAGCAGCAGCAGCAGTAG
CAGCAGCAGAAGAAGAAATAGGAGCAGCAGTAGTAATAGTAAATCTCGGC
TGCCTCCCATCCGCTTGCCGCTGACGGAGCAAGTAAGTGAAGCAGAGGCT
GATGCCGCCGCGGCGGCGGCAGCAGCAGCAGCAGCAGCACCAGCACCAGC
ACCAGCAGCAGCAGCACCAGTAGCAGCACGAGCACCGATGGCAAACGGAA
ATGTGGTTCGATCATCTGCTCGACGGGTCTATGGTAATTTTGACAATAAT
TACAATCCCCATCGAAGCGGAGGAGAACGAGGAGCTGAAGGCCCACCATC
TTTTCGACGGCAAGTGCAGTCGCAACAGCATTCGCAGATGCAGCAGCAGC
AGCGGGGGCGACATCAGGGAGAAGGGATGGAAGAAGGAAAATCGGGGGAA
GAAATTTTGGCCCCGAGGGAAATGCTGGGTCTGCGGAAGCGTCATCCTGC
TGCGCGCTCTGTTGCCGCGTCTGCTGCAGCAGGGGAGAGTGACAGCAGTC
CTGCGCCGCCAAGGAGAGAGCAGCAAAGAGACGGAGGACGAGGGGGGGGA
GAAGAAGCAAATCGTCGGGCAGCAGCTGCAGCAGCCGACGAGGATGAGGA
AGCCAGCGACGAGGAGGATTTTGCTTTGGGCGACAACACCACCGCAGCCA
CCACCGGCAATAGGAATAGCAACAACATCAACAACAACATCAGCAACGAG
AATAACGACAACGTTTTGAAAGACCGTCGTGTCGTGTCGAGCCAAATAAA
AGATACGAAATTGACTGAGTACATCAAGGACAAGAAGAAAGCGCGTTCCA
CCCGTGACCGTTTCCTGGCCGACACTGGCTTGGTCCGCAGCGAAGTCCAC
CCTCCACAGCGCTTCATCGAAGTGTATTACAACTCGTGGGCGGACGATTT
TTACACGGCTATCACCACAAGTTCTTCGTGTTTTGGCCCTCGGTGGTGGT
TTAGGGAAGCCTTGGGGCACGACCCTCATGAAGTGATGGCATGGGTCAGG
GAGTGGGAGACAAAGGCACGAAAACATGATGTGTTATCAGAGGGGGTAGA
GAGGGTGATTCGGGAGGCGATGGAGGTGGGGGGATCGGGAGAAGAGGACA
ATCCAAGTGTGGAGACAGAGAGGTTCTTGGCGTTGAAGGCCCGATTAAGG
GAGAGGAGGGAGCCGAAGGTAATAGCGATTGGCGATGTGCATGGGTGTAT
CGAGGAGTTGCGAGCACTAATCAAAAAAGCAGAGTATGGTCCCGGGGACT
TGCTTGTATTTTTGGGGGACTTGGTGGCGAAAGGTCCGGAAAGCATTCAA
GTTATCAGATTGGCGAGGGAGATTGGGGCGTTGTCAGTGAGGGGGAATCA
TGAGAATGAGGTGATTAGGTGGAGTCGGGCTCTGGCTTTGGGGGCTCAGA
GTAACTTTAAGAGTGAACATTATTTGATTGCCATGGGATTGGAAGAGGCG
GATGTGGAATGGCTGCGAAATTTACCCTGGTATATCTCATGCTCGGACTT
ACAATTGTTGTTCGTCCATGCGGGGTTTGTTGCGAATCAACGCTTGTCGA
AGCAGCATCCGAGGTTCATGATTAACATGAGGTCGATTTTGGCTGATGGG
ACCGTGAGTGCACGATATTATCAAGATTATCCGTGGGCGAGGACGTGGCA
AGGGCCCCAGACTGTGTTGTTCGGCCATGATGCGCGAAGGGGGATGCAAG
ACTACGAACAGGCCTTGGGTTTGGACACCGGCTGTGTGTATGGCGGTAAT
TTGACGGCGTGTGTGCTTCCAGGGAAGGAGTTGGTGCAGGTCCCGGCGGC
GGAGCCGTATATCGTGAATCGCTATGACAGGATCATGAAAAGGGCGCAGA
TGCTTCAGAAGGAGGGGCTGGGTGGAGGGGAGGGTGGCGGAGTGGAGATT
GAAGGAGGAGGGAAGAAGTAG

Synonyms

Publications