NO05G01580, NO05G01580 (gene) Nannochloropsis oceanica

Overview
NameNO05G01580
Unique NameNO05G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1375
Alignment locationchr5:438862..440236 -

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Properties
Property NameValue
DescriptionSodium bile acid symporter family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:438862..440236 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR004710Bilac:Na_transpt
IPR002657BilAc:Na_symport/Acr3
Homology
BLAST of NO05G01580 vs. NCBI_GenBank
Match: EWM28256.1 (sodium bile acid symporter family protein [Nannochloropsis gaditana])

HSP 1 Score: 418.7 bits (1075), Expect = 2.100e-113
Identity = 256/319 (80.25%), Postives = 272/319 (85.27%), Query Frame = 0
Query:   98 ATLIAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREA--GKKGAK 415
            AT++AAAKSLYFP YVLLAGLLG TRPQLY  LSE FITRALSAVMVLMGMTLS+DDFARIG SKR V LGWCAQFSIMP +AL+MSR+FRLPPHLAAGV+LVGCCPGGTASNLVTLLA ADVALSISMTAVSTLTAG MTP   XXXXXXXXXXXXXXXXXXX          GL+TN+YLLPS  XX        TP++SGLLVAAICGKVVATNA AV Q+G  LLGA++ LH FGFFFGF MAR LGF+RQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGS+ AWVWSRE   G KGAK
Sbjct:   95 ATILAAAKSLYFPAYVLLAGLLGVTRPQLYAGLSEGFITRALSAVMVLMGMTLSMDDFARIGRSKRAVVLGWCAQFSIMPGMALIMSRVFRLPPHLAAGVILVGCCPGGTASNLVTLLAEADVALSISMTAVSTLTAGAMTPLLTXXXXXXXXXXXXXXXXXXXLQVVLLPVALGLVTNSYLLPSXXXXXXXXXXXSTPLVSGLLVAAICGKVVATNAAAVLQSGGSLLGAVLALHSFGFFFGFWMARALGFSRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSLAAWVWSREGDRGGKGAK 413          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_005832174.1 (hypothetical protein GUITHDRAFT_108836 [Guillardia theta CCMP2712] >EKX45194.1 hypothetical protein GUITHDRAFT_108836 [Guillardia theta CCMP2712])

HSP 1 Score: 208.8 bits (530), Expect = 3.400e-50
Identity = 140/308 (45.45%), Postives = 180/308 (58.44%), Query Frame = 0
Query:  109 FPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKKGAKEE 417
            FP +VL  G+LG TRP     L    IT +L+  M+ MGMTL V DF R+  S R V LG+  QF+IMP +   M++LF L P  A G++LV  CPGGTASNLVTL+A ADVALS+ M             XXXXXXX                         GL  NT+     +  +   +S +TP+L  +LV+ ICG V+A  A +   AG+PLLGA++ LH+ GF  G+ + R+LG+   +++TVSIETGMQNSAL VVLA  +   PL+ LP A+SA CHSVLGS  A  W R  G+K  KEE
Sbjct:    7 FPLWVLAGGVLGVTRPAALAWLKGDLITASLALTMLFMGMTLDVKDFQRVMQSPRQVFLGFMCQFTIMPFLGWSMAKLFGLSPAFAVGLILVSACPGGTASNLVTLIAKADVALSVLMXXXXXXXXXXXXXXXXXXXXGSLVPVDASGLLISTLQVVLAPVGLGLAINTF-----APAVCKMVSGVTPLLCVVLVSLICGSVIAQTASSFIAAGLPLLGAVIGLHLGGFLLGYFVPRILGYPEPISRTVSIETGMQNSALGVVLATRNFADPLTALPCAISATCHSVLGSSFAAYW-RLGGRK--KEE 306          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: GAV60673.1 (SBF domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 208.8 bits (530), Expect = 3.400e-50
Identity = 125/307 (40.72%), Postives = 171/307 (55.70%), Query Frame = 0
Query:  100 LIAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSR 407
            LI    S  FP +V L  L G  +P  +  ++       +S  M+ MGMTLS+DD +      + + LG+  Q+S+MP    L+S+L  LP H AAG++LVGCCPGGTASN+VT +A  +VALS+ MTA STLTA +MTP                                G   N Y        L   +S + P ++   VA +CG  +A NA A+  +G  ++ A + LH  GFFFG+++AR+LG +   +KTVSIE GMQNS L VVLA     +PL+ +P AVS+VCHS+ GSVLA +W R
Sbjct:  111 LIGEVISTAFPIWVALGCLSGLMKPSSFSWVTPKLSIIGISITMLGMGMTLSLDDLSEALAMPKEILLGFVLQYSVMPISGFLLSKLLCLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTLTAAVMTPFLTAKLAGQYVAVDANGLLMSTLQVVLLPVLAGAFLNQYF-----QGLVKFVSPLMPPIAVATVAVLCGNAIAQNASAILMSGHQVVLAALLLHASGFFFGYMLARMLGLDVASSKTVSIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRR 412          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_004488981.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Cicer arietinum])

HSP 1 Score: 204.9 bits (520), Expect = 4.800e-49
Identity = 122/307 (39.74%), Postives = 174/307 (56.68%), Query Frame = 0
Query:  100 LIAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSR 407
            ++  A S  FP +V +  +LG  RP  ++ ++       L+ +M+ MGMTL++DD        + V  G+  Q+S+MP  A L+S+L  LP H AAG++LVGCCPGGTASN+VT LA  +VALS+ MTA STL+A IMTP                                G L N Y  P     L   +S + P ++   VA +CG  +A ++ A+  +G  ++ A+  LH  GFFFG+++AR LG +   ++T+SIE GMQNS L VVLA      PL+ +P AVS+VCHS+ GS+LA +W R
Sbjct:   91 VVGEALSTAFPLWVTIGCVLGLVRPSSFNWVTPKLSLVGLTVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSVMPISAFLISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPFLTAKLAGKYVAVDAAGLLMSTLQVVLFPVVGGALLNQYFQP-----LVKLVSPLMPSMAVATVAILCGNAIAQSSSAILMSGGQVILAVSLLHASGFFFGYVLARSLGLDMSSSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIYGSILAGMWRR 392          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_024632183.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Medicago truncatula])

HSP 1 Score: 204.9 bits (520), Expect = 4.800e-49
Identity = 123/303 (40.59%), Postives = 172/303 (56.77%), Query Frame = 0
Query:  104 AKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSR 407
            A S  FP +V +  +LG  RP  ++ +++      LS +M+ MGMTL++DD        + V  G+  Q+S+MP  A  +S+L  LP H AAG++LVGCCPGGTASN+VT LA  +VALS+ MTA STL+A IMTP                                G L N Y  P     L   +S + P L+   VA +CG  +A ++ A+  +G  ++ A   LH  GFFFG+++AR+LG +   ++T+SIE GMQNS L VVLA      PL+ +P AVS+VCHS+ GS+LA +W R
Sbjct:   93 AISTAFPLWVTIGCVLGLMRPSSFNWVTDKLSIVGLSVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSVMPLSAFFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPFLTAKLAGKYVAVDAAGLLISTLQVVLFPVLAGALLNQYFQP-----LVKLVSPLMPPLAVATVAVLCGNAIAQSSSAILMSGGQVILASCLLHASGFFFGYILARMLGLDVASSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIFGSILAGMWRR 390          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_010417455.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Camelina sativa])

HSP 1 Score: 204.5 bits (519), Expect = 6.300e-49
Identity = 123/311 (39.55%), Postives = 174/311 (55.95%), Query Frame = 0
Query:  101 IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKK 412
            +  A S+ FP +V L  LLG  RP  ++ ++  + T  L+  M+ MGMTL++DD        + +  G+  Q+S+MP     +S+L  LPPH AAG++LVGCCPGGTASN+VT +A  +VALS+ MTA ST++A IMTP                                G   N Y        L   +S + P ++   VA +CG  +  NA A+  +G  ++ A   LH  GFFFG+L +RLLG +   ++T+SIE GMQNS L VVLA     +PL+ +P AVS+VCHS+LGS LA +W R + K+
Sbjct:   94 LGEAVSIAFPVWVSLGCLLGLLRPTTFNWVTPNWTTVGLTITMLGMGMTLTLDDLRGALSMPKELFAGFVLQYSVMPLSGYFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVILLPVLAGAFLNQYF-----KKLVKFVSPVMPTIAVGTVAILCGYAIGQNASAILMSGRQVVLASCLLHTSGFFFGYLFSRLLGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSALAGIWRRSSSKQ 399          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: WP_099798219.1 (bile acid:sodium symporter family protein [Synechococcus lividus] >ATS17867.1 transporter [Synechococcus lividus PCC 6715])

HSP 1 Score: 204.1 bits (518), Expect = 8.300e-49
Identity = 121/296 (40.88%), Postives = 173/296 (58.45%), Query Frame = 0
Query:  109 FPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVW 405
            FP +VL+  ++    P L+  +S  +I   L  VM+ MG+TLS  DF  +G   R VALG+ AQ+ IMPT   L++RL++LPP  A G++LV CCPGGTASN+V+ +A A VALS+ MT  STL A ++TP                                GL  NT      +  L   +  I+P +S L +  ICG V A +A A+   GV LL A+++LH  GFF G+ +AR +G++++  +T+SIE GMQNS L V LAR +  +PL+ +P A+S V HS++GS+LA +W
Sbjct:   11 FPLWVLITAIVALLHPPLFLWVSSDYIVWILMVVMLGMGLTLSWADFKAVGLMPRSVALGFLAQYLIMPTAGWLVARLYQLPPPFAVGLILVACCPGGTASNVVSFIARAHVALSVVMTLCSTLAAVVLTPLLTKLLAGQYVEVNAMQLFWGTVQVVLLPILVGLALNT-----KAPNLVKKVLPISPFISVLGICIICGGVFAASASAILTHGVQLLAAVISLHSIGFFGGYYIARWVGYSQRTCRTISIEVGMQNSGLGVALARQAFANPLTAVPCAISGVTHSLIGSLLAGIW 301          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: NP_565182.1 (Sodium Bile acid symporter family [Arabidopsis thaliana] >Q93YR2.1 RecName: Full=Probable sodium/metabolite cotransporter BASS1, chloroplastic; AltName: Full=Bile acid transporter 2; AltName: Full=Bile acid-sodium symporter family protein 1; Flags: Precursor >AAL24290.1 Unknown protein [Arabidopsis thaliana] >AAM65644.1 unknown [Arabidopsis thaliana] >AAN15343.1 Unknown protein [Arabidopsis thaliana] >AEE36121.1 Sodium Bile acid symporter family [Arabidopsis thaliana] >OAP18654.1 hypothetical protein AXX17_AT1G73210 [Arabidopsis thaliana])

HSP 1 Score: 203.8 bits (517), Expect = 1.100e-48
Identity = 123/311 (39.55%), Postives = 174/311 (55.95%), Query Frame = 0
Query:  101 IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKK 412
            +  A S  FP +V L  LLG  RP  ++ ++  +    L+  M+ MGMTL++DD        + +  G+  Q+S+MP  A  +S+L  LPPH AAG++LVGCCPGGTASN+VT +A  +VALS+ MTA ST++A IMTP                                G   N Y        L   +S + P ++   VA +CG  +  NA A+  +G  ++ A   LH+ GF FG+L +R+LG +   ++T+SIE GMQNS L VVLA     +PL+ +P AVS+VCHS+LGSVLA +W R A K+
Sbjct:   93 VGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIVGLTITMLGMGMTLTLDDLRGALSMPKELFAGFLLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGAFLNQYF-----KKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQ 398          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_010537693.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Tarenaya hassleriana])

HSP 1 Score: 203.8 bits (517), Expect = 1.100e-48
Identity = 123/308 (39.94%), Postives = 173/308 (56.17%), Query Frame = 0
Query:  106 SLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKKGA 414
            S  FP +V +  LLG  +P  +  ++  +    L+  M+ MGMTL++DD        + +  G+  Q+SIMP    L+S+L  LP H AAG++LVGCCPGGTASN+VT +A  +VALS+ MTA STL+A IMTP                                G   N Y        L   +S + P ++   VA +CG  +  NA A+  +G  ++ A   LH+FGFFFG+L +R+LG +   ++T+SIE GMQNS L VVLA      PL+ +P AVS+VCHS+LGSVLA +W R++ +K A
Sbjct:  105 STAFPIWVSVGCLLGLLKPSAFSWVTPRWTIIGLTITMLGMGMTLTLDDLRGALSMPKELLSGFVLQYSIMPMSGFLVSKLLNLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVMMTAASTLSAVIMTPFLTAKLAGQYVTVDALGLLMSTLQVVLLPVLGGAFLNQYF-----QRLVKFVSPLMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASTLLHMFGFFFGYLFSRMLGIDVASSRTISIEVGMQNSVLGVVLATQHFGDPLTAVPCAVSSVCHSILGSVLAGIWRRDSPEKAA 407          
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_002889199.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Arabidopsis lyrata subsp. lyrata] >EFH65458.1 bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 203.4 bits (516), Expect = 1.400e-48
Identity = 123/311 (39.55%), Postives = 173/311 (55.63%), Query Frame = 0
Query:  101 IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKK 412
            +  A S  FP +V L  LLG  RP  ++ ++  +    L+  M+ MGMTL+ DD        + +  G+  Q+S+MP  A  +S+L  LPPH AAG++LVGCCPGGTASN+VT +A  +VALS+ MTA ST++A IMTP                                G   N Y        L   +S + P ++   VA +CG  +  NA A+ ++G  ++ A   LH+ GF FG+L +RLLG +   ++T+SIE GMQNS L VVLA     +PL+ +P AVS+VCHS+LGS LA +W R A K+
Sbjct:   91 VGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIAGLTITMLGMGMTLTFDDLRGAFSMPKELFAGFVLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGAFLNQYF-----QKLVKFVSPVMPPVAVGTVAILCGYAIGQNASAILRSGKQVVLASCLLHISGFLFGYLFSRLLGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSALAGIWRRSAPKQ 396          
The following BLAST results are available for this feature:
BLAST of NO05G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28256.12.100e-11380.25sodium bile acid symporter family protein [Nannoch... [more]
XP_005832174.13.400e-5045.45hypothetical protein GUITHDRAFT_108836 [Guillardia... [more]
GAV60673.13.400e-5040.72SBF domain-containing protein [Cephalotus follicul... [more]
XP_004488981.14.800e-4939.74PREDICTED: probable sodium/metabolite cotransporte... [more]
XP_024632183.14.800e-4940.59probable sodium/metabolite cotransporter BASS1, ch... [more]
XP_010417455.16.300e-4939.55PREDICTED: probable sodium/metabolite cotransporte... [more]
WP_099798219.18.300e-4940.88bile acid:sodium symporter family protein [Synecho... [more]
NP_565182.11.100e-4839.55Sodium Bile acid symporter family [Arabidopsis tha... [more]
XP_010537693.11.100e-4839.94PREDICTED: probable sodium/metabolite cotransporte... [more]
XP_002889199.11.400e-4839.55probable sodium/metabolite cotransporter BASS1, ch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003714NSK003714Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01580.1NO05G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100004g81gene2339Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01580.1NO05G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01580 ID=NO05G01580|Name=NO05G01580|organism=Nannochloropsis oceanica|type=gene|length=1375bp
ATGGTGAGGAGGTCGACTGCTTTTTTCCTTATGATGCTTCCTTGTATGGG
GCCAGACCTGGCCCAGGCCTTCGTATCCAGACATCCTGCGCGGCCAACGA
TGGGCTGCTATCGAGCTATAGTGAAAAGTGATGCAGTCGGAGCTTTTCTA
ACGAGGGGCAGAGGTAATAGCAGGCACAGCAGGCTATCGCTTTCCGCCAC
TGCTACCTCTGCCCTCTCCACCCTGTCTGCACCGCGCCCATTCGCCCATG
GCGGCGGCGGAGACGGAGACCGTAAGAAAAAGAGTACTAAAGCGACCTTG
ATTGCTGCCGCCAAAAGTTTATACTTCCCTTTTTACGTCCTGCTGGCCGG
CTTGCTAGGTGCGACTCGGCCCCAACTCTATGACTGCCTGAGCGAGATGT
TTATCACACGGGCTTTGTCCGCGGTGATGGTTCTCATGGGGATGACCCTT
TCCGTGGACGATTTCGCTCGGATAGGTGGTAGTAAACGGGTGGTAGCCCT
AGGATGGTGCGCACAATTTTCGATAATGCCAACTGTAGCTTTGTTGATGT
CGCGGCTCTTTCGTCTTCCCCCACATTTGGCAGCTGGGGTCGTCCTCGTT
Ggttagtatgtgtcttaccgggagccatgcggagagcgcttcgtttacta
ttcgtacttgttttttctttacccttatccttcctccttcccttcctcac
ttcacaaacgacactacagGTTGCTGTCCAGGCGGCACCGCCTCTAACCT
TGTCACCCTTCTCGCCAACGCAGATGTCGCCCTCAGCATCAGCATGACAG
CCGTCTCCACCCTTACTGCAGGGATAATGACTCCCCTCCTCACCTCCCTT
CTCTTGGGGTCCCTTGTCCCCGTCGACACCACCGCCCTTCTTCGCACCAC
CTTGCAAGTCGTCCTCCTCCCTGTCATCCTCGGCCTGCTTACCAACACCT
ACCTCCTGCCCTCTCTCTCTCCCTCCCTCACCCATGCCCTCTCTCGGATC
ACCCCCGTTCTATCCGGTTTGCTTGTTGCTGCAATCTGTGGTAAAGTAGT
CGCGACAAATGCAGGGGCAGTGGCACAAGCGGGCGTACCCTTGTTAGGAG
CGATCGTGACGTTACATGTGTTTGGTTTCTTTTTTGGGTTTTTAATGGCG
AGGCTTTTGGGCTTTAATCGCCAAGTTGCCAAGACTGTGTCCATTGAAAC
GGGAATGCAAAATTCAGCGCTCGCTGTGGTGCTGGCGCGGTCGAGTCTGC
CGCACCCCCTGTCAGGCTTGCCAGGTGCAGTCTCAGCAGTATGTCATTCG
GTGTTGGGGAGTGTGCTGGCGTGGGTCTGGAGTCGGGAGGCAGGCAAGAA
GGGAGCGAAAGAAGAGTGTGAGTGA
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protein sequence of NO05G01580.1

>NO05G01580.1-protein ID=NO05G01580.1-protein|Name=NO05G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MVRRSTAFFLMMLPCMGPDLAQAFVSRHPARPTMGCYRAIVKSDAVGAFL
TRGRGNSRHSRLSLSATATSALSTLSAPRPFAHGGGGDGDRKKKSTKATL
IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTL
SVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLV
GCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPLLTSLLLGSLV
PVDTTALLRTTLQVVLLPVILGLLTNTYLLPSLSPSLTHALSRITPVLSG
LLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFN
RQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVL
AWVWSREAGKKGAKEECE*
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Synonyms
Publications