NO05G01560, NO05G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_005790301.1 (hypothetical protein EMIHUDRAFT_446936 [Emiliania huxleyi CCMP1516] >EOD37872.1 hypothetical protein EMIHUDRAFT_446936 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 185.7 bits (470), Expect = 2.100e-43 Identity = 104/243 (42.80%), Postives = 147/243 (60.49%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFKTGPF-------------DYTENLMNT-KLVSDLGEKLKDLDGLIFSADCVTEG-GMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LYVYDHCPFCVR R+ G+ VPH+L+F+ NDD+ETPTA+VGKK+ PI V+ EG M ES+DI+ D + + PA+ R D+KA+ S+ L R+ RPR+ + LPEF A R AFV NH PF+ + Y+E T +L+++ K+ +L+G+I + + TEG G SYDD+D++ + R LTVVKGL + PK +AYL+ AE ++PLY M + Sbjct: 4 PELYVYDHCPFCVRVRVAAGVLGVPHKLVFMGNDDVETPTAMVGKKIAPI--WVDEEGP---MAESLDIIAKFDAGGQ-----IAPASGRTDLKAWQKSVQTLMRKLQRPRYVMVP-LPEFMQKAGRDAFVANHQMPPFEKSEWKGNPDMPLEQKYQKYSEAFAQTPELLAEANAKVAELEGMIHAPEACTEGLGFSYDDVDLWARLRSLTVVKGLQIGPKTRAYLDHFAEAGDVPLYDVMAV 235
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_002297308.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86379.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 185.7 bits (470), Expect = 2.100e-43 Identity = 95/249 (38.15%), Postives = 147/249 (59.04%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKP-LLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFKTGPFD------------------YTENLM--NTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P +YVYDHCPFCVR R+ G+K V H + FL NDD+ TPT LVGKK+ PI ++ + ++M ES+DI+ +D D R+G + PA+ R+DIKA+ S+ L R RPR+ + +LPEF R AF++NH P++ + Y E + T L+ DL +L +LD +++S +EGG S DDID++ + R +T+++G+ P KL+AY++ ++ ++PLY +M L Sbjct: 69 PTVYVYDHCPFCVRVRLAMGMKNVKHLIHFLANDDVATPTGLVGKKIAPIFQLPEDK---LIMMESLDIIAKIDSDERFGPTNQILPASGRKDIKAWQKSVQTLLRTLQRPRYVATGLLPEFQQLDGRHAFIKNHQLPPYEKPEWKGDGSSENPGMEMDQKLKLYAEAMAADPTPLIEDLNARLVELDDMLYSEHFCSEGGFSLDDIDLWARLRSVTIIQGVQWPGKLRAYMDNLSALGDVPLYDEMAL 314
BLAST of NO05G01560 vs. NCBI_GenBank
Match: OEU18569.1 (hypothetical protein FRACYDRAFT_182589 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 184.9 bits (468), Expect = 3.500e-43 Identity = 99/249 (39.76%), Postives = 141/249 (56.63%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPL-LKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFK----------TGPFDYTENLMN----------TKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P +YVYDHCPFCVR R+ G+K V H ++FL NDDI TPT L+GKK+ PI + + +M ES+DI+ +D D R+G + PAT+R DIKA+ S+ L R RPR+ + +LPEF R AF++NH P++ P E ++ T L+ DL KL +LDG+IFS +EGG+S DDID++ + R +T+ K +V P KL Y+ + ++P Y M L Sbjct: 58 PIVYVYDHCPFCVRVRLALGVKNVKHNVVFLQNDDIPTPTKLIGKKIAPIFSIPEDD---FIMGESLDIIAKIDSDERFGTTAQILPATSRTDIKAWQKSVQSLLRTIQRPRYVATGLLPEFQQIEGRHAFIKNHQLPPYEKPEWKGDGTDENPGMAMEEKLDLYAAAMAKDPTPLLEDLNAKLIELDGIIFSEHYCSEGGVSMDDIDLWSRLRSITITKDVVWPEKLGKYIHNFSVLGDVPTYSDMAL 303
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_009535726.1 (hypothetical protein PHYSODRAFT_564826 [Phytophthora sojae] >EGZ09093.1 hypothetical protein PHYSODRAFT_564826 [Phytophthora sojae]) HSP 1 Score: 180.3 bits (456), Expect = 8.700e-42 Identity = 104/226 (46.02%), Postives = 138/226 (61.06%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNT-KLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LYVYDHCP+CVRARMIFG K+VPH+L+FL N D TP LVG K PIL++ + PESMDIVKYVD + G +L PA NR +IK + AD+ R PRF ++ EF +R + GPFD E L+ T +LV + L+ L + S+ V E +SYDDID+FG+ RGLT+V+ L PPKL+ Y++ M+EK++IPL M + Sbjct: 36 PKLYVYDHCPYCVRARMIFGFKKVPHELVFLANHDEATPIGLVGSKQAPILQLADGH----AFPESMDIVKYVD-EHFGGPAVLAPAANRPEIKQWIKDTADVFRLLYHPRFH-AAPFAEFAMLESREYYRIKKEKTIGPFD--EALVKTPELVEQANKFLEQLAPMFHSSHSVNE-QLSYDDIDLFGRLRGLTLVRDLEWPPKLREYIDYMSEKSDIPLLDNMAV 252
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_008870767.1 (GrxB family glutaredoxin [Aphanomyces invadans] >ETW00632.1 GrxB family glutaredoxin [Aphanomyces invadans]) HSP 1 Score: 178.3 bits (451), Expect = 3.300e-41 Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 0 Query: 58 RPNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPA-TNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNT-KLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPL 278 +P LY+YDHCPFCVRARMIF LK V +L+FL N D TP LVG KVVPILE EG +VMPESMDIV+YVD G P+L A RED+K + AD+ RR PRF + EF A+R + G FD ++ N+ + L + L DL+G++ + V +SYDDID+FG+ RGLT++KG+V PP+++AY+ +++ T++PL Sbjct: 39 KPRLYIYDHCPFCVRARMIFALKGVDVELVFLANHDEATPIGLVGAKVVPILE--TPEG--IVMPESMDIVRYVD-THYGGTPILADADPTREDLKKWIHDSADVMRRLYHPRFQ-AGYFAEFAQSASRNYYKTKKEKSIGSFDV--SIANSPAYIQALNQHLADLEGMLKTPQTV-NATLSYDDIDLFGRLRGLTIIKGVVWPPRVRAYISGLSKTTDVPL 251
BLAST of NO05G01560 vs. NCBI_GenBank
Match: ETL87983.1 (GrxB family glutaredoxin [Phytophthora parasitica]) HSP 1 Score: 177.9 bits (450), Expect = 4.300e-41 Identity = 103/226 (45.58%), Postives = 139/226 (61.50%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNT-KLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LY+YDHCPFCVRARMIFG K+VPH+L+FL N D TP LVG K PIL++ T+G PESMDIVKYVD + G +L P+ +R +IK + AD+ R+ PRF ++ EF +R + + GPF E L T +LV + L+ L + S+ V E +SYDDID+FG+ RGLT+V+ L PPKL+ Y++ M+EK +IPL M + Sbjct: 36 PKLYIYDHCPFCVRARMIFGFKKVPHELVFLANHDEATPIGLVGSKQAPILQL--TDGH--AFPESMDIVKYVD-EHYGGPVVLAPSADRPEIKQWIKDTADVFRQLYHPRFH-AAPFAEFAMLESREYYRKKKEKTIGPFQ--EALDKTPELVEQANKYLEQLAPMFHSSHSVNE-KLSYDDIDLFGRLRGLTLVRDLEWPPKLREYVDYMSEKADIPLLDNMAV 252
BLAST of NO05G01560 vs. NCBI_GenBank
Match: OEU13744.1 (glutathione S-transferase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 177.2 bits (448), Expect = 7.300e-41 Identity = 90/244 (36.89%), Postives = 142/244 (58.20%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKP-LLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFD----------------YTENLMN--TKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LY YDHCPFCVR R+ G K + H L+FL NDD+ TPTA+VGKK PI+ + + M ESMDI++Y++ D R+G +L+PA+ R D+K + S+ R RPR+ + ++PEF +R AF+ NHP P+D Y + + N T ++ +L KL LD +++ TEGG+S DDID++ + R +++V+ + P L+ Y++ ++E ++PLY + + Sbjct: 17 PILYNYDHCPFCVRVRLALGFKNIKHNLVFLANDDVATPTAMVGKKASPIMV------QDLYMIESMDIIEYLENDERFGPTNILRPASGRTDLKEWQKSVRMQMRTLQRPRYVATGLIPEFQQLDSRHAFIANHPLP--PYDKDEWKSMKDLSEKLTIYADAMANDPTCMIEELNAKLVALDDIVYCDTYCTEGGLSMDDIDLWARLRSISIVQDVEWPDGLRRYMDNLSELGDVPLYDGLAI 252
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_008894422.1 (GrxB family glutaredoxin [Phytophthora parasitica INRA-310] >ETI41237.1 GrxB family glutaredoxin [Phytophthora parasitica P1569] >ETL34723.1 GrxB family glutaredoxin, partial [Phytophthora parasitica] >ETN20508.1 GrxB family glutaredoxin [Phytophthora parasitica INRA-310] >ETO69908.1 GrxB family glutaredoxin [Phytophthora parasitica P1976] >ETP11006.1 GrxB family glutaredoxin [Phytophthora parasitica CJ01A1] >KUF81956.1 Glutaredoxin-2 [Phytophthora nicotianae] >KUF89526.1 Glutaredoxin-2 [Phytophthora nicotianae]) HSP 1 Score: 176.8 bits (447), Expect = 9.600e-41 Identity = 100/225 (44.44%), Postives = 137/225 (60.89%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LY+YDHCPFCVRARMIFG K+VPH+L+FL N D TP LVG K PIL++ T+G PESMDIVKYVD + G +L P+ +R +IK + AD+ R+ PRF ++ EF +R + + GPF + +LV + L+ L + S+ V E +SYDDID+FG+ RGLT+V+ L PPKL+ Y++ M+EK +IPL M + Sbjct: 36 PKLYIYDHCPFCVRARMIFGFKKVPHELVFLANHDEATPIGLVGSKQAPILQL--TDGH--AFPESMDIVKYVD-EHYGGPVVLAPSADRPEIKQWIKDTADVFRQLYHPRFH-AAPFAEFAMLESREYYRKKKEKTIGPFQDALD-KTPELVEQANKYLEQLAPMFHSSHSVNE-KLSYDDIDLFGRLRGLTLVRDLEWPPKLREYVDYMSEKADIPLLDNMAV 252
BLAST of NO05G01560 vs. NCBI_GenBank
Match: ETK81298.1 (GrxB family glutaredoxin, partial [Phytophthora parasitica] >ETM41208.1 GrxB family glutaredoxin [Phytophthora parasitica] >ETP39142.1 GrxB family glutaredoxin [Phytophthora parasitica P10297]) HSP 1 Score: 176.8 bits (447), Expect = 9.600e-41 Identity = 100/225 (44.44%), Postives = 137/225 (60.89%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LY+YDHCPFCVRARMIFG K+VPH+L+FL N D TP LVG K PIL++ T+G PESMDIVKYVD + G +L P+ +R +IK + AD+ R+ PRF ++ EF +R + + GPF + +LV + L+ L + S+ V E +SYDDID+FG+ RGLT+V+ L PPKL+ Y++ M+EK +IPL M + Sbjct: 36 PKLYIYDHCPFCVRARMIFGFKKVPHELVFLANHDEATPIGLVGSKQAPILQL--TDGH--AFPESMDIVKYVD-EHYGGPVVLAPSADRPEIKQWIKDTADVFRQLYHPRFH-AAPFAEFAMLESREYYRKKKEKTIGPFQDALD-KTPELVEQANKYLEQLAPMFHSSHSVNE-KLSYDDIDLFGRLRGLTLVRDLEWPPKLREYVDYMSEKADIPLLDNMAV 252
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_009826344.1 (GrxB family glutaredoxin [Aphanomyces astaci] >ETV84652.1 GrxB family glutaredoxin [Aphanomyces astaci]) HSP 1 Score: 176.0 bits (445), Expect = 1.600e-40 Identity = 102/222 (45.95%), Postives = 136/222 (61.26%), Query Frame = 0 Query: 58 RPNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPA-TNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNTKLVSD-LGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPL 278 +P LY+YDHCPFCVR RMIF LK+V +L+FL N D +TP LVG KVVPILE + VVMPESMDIV+YVD G P+L A RED+K + AD+ RR PRF + EF +RA + G F + N+ D L L DL+GL+ + V G +SYDDID+FG+ RGLT+VKG+V P +++AY++ ++ T++PL Sbjct: 40 KPRLYIYDHCPFCVRVRMIFALKEVDVELVFLANHDEDTPIGLVGSKVVPILETPD----GVVMPESMDIVRYVDA-HYGGAPILAEADPTREDLKKWIHDSADVMRRLYHPRFQ-AGYFAEFAQSTSRAYYKAKKEKSIGSFAVA--IANSPAYIDALNGYLLDLEGLLKTPQSV-NGTLSYDDIDLFGRLRGLTIVKGVVWPARVRAYIDHLSTATDVPL 252 The following BLAST results are available for this feature:
BLAST of NO05G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01560 ID=NO05G01560|Name=NO05G01560|organism=Nannochloropsis oceanica|type=gene|length=1077bpback to top protein sequence of NO05G01560.1 >NO05G01560.1-protein ID=NO05G01560.1-protein|Name=NO05G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
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