NO05G01560, NO05G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01560 vs. NCBI_GenBank
Match: EWM28187.1 (glutaredoxin 2 [Nannochloropsis gaditana]) HSP 1 Score: 395.2 bits (1014), Expect = 1.700e-106 Identity = 191/283 (67.49%), Postives = 223/283 (78.80%), Query Frame = 0 Query: 1 MPRLLQALLMLLLCSSIAGFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLAKRPNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 MPRLLQ +LML+ CS IAGF L KRPNLY+YDHCPFCVRAR+IFGLK++PHQLIFLDNDD +TPTALVGKK+VPILEM++ +G+ VVMPESMDIVK +D D RWG P+L+ ++REDIKAFFDSIADLSRRCTRPRFALSS+LPEFHTPAARAAFVRNHPFK+ PFDYTENL N LV+DL +L++LD ++FS +CVTEGG+SYDD+D+FGK RGLTVV GLVLPP+LKAY+E EKTEIPLY+QMGL Sbjct: 1 MPRLLQVVLMLMFCSRIAGFCKPRMGTLPVRLPSRAAAHRGLKMMSTQ------LDKRPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEMIDAQGERVVMPESMDIVKLIDEDPRWGPPVLRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQNKSLVADLSARLRELDAMLFSDECVTEGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPLYYQMGL 277
BLAST of NO05G01560 vs. NCBI_GenBank
Match: CEL94178.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 236.5 bits (602), Expect = 1.000e-58 Identity = 119/229 (51.97%), Postives = 162/229 (70.74%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTE-GKTVVMPESMDIVKYVDGDSRWGK--PLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENL-MNTKLVSDLGEKLKDLDGLIFSAD--CVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQM 282 P LYVYDHCPFCVRARMIFGLK + H L+++ NDDIETPT L+GKK+ PILE+ G+ ++MPES+DIVKY+D G PLLKP + R D+K + DSIA+ SRR +RPRFA S+ LPEF +AR ++ HP + P Y EN + + ++ L E LK LDG+I + ++EGG+SYDDID+F + R L++VKGL PP +KAY+E +++KT++ LY +M Sbjct: 108 PRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPGEGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLE-NPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALYTKM 335
BLAST of NO05G01560 vs. NCBI_GenBank
Match: CBJ31439.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 220.3 bits (560), Expect = 7.500e-54 Identity = 113/227 (49.78%), Postives = 159/227 (70.04%), Query Frame = 0 Query: 58 RPNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKT-VVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENL-MNTKLVSDLGEKLKDLDGLIFSADCV-TEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQM 282 RP L++YDHCP+CVR RM+FGLK + H L +L NDDIETPTA+VGKK+VPILE+ + +M ESMDIVK +D D ++G P+L PA +R+D+ + S A L RR RPR A++ L EF T +AR AFVRNHP P Y NL + KL+ +L +L L+G+I S V +G +SY+D++ F + RGLT+V+GL +PPKL+AYL+ ++E+ ++PLY ++ Sbjct: 17 RPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPE-PSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKI 241
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_009040212.1 (hypothetical protein AURANDRAFT_31368 [Aureococcus anophagefferens] >EGB05084.1 hypothetical protein AURANDRAFT_31368 [Aureococcus anophagefferens]) HSP 1 Score: 206.1 bits (523), Expect = 1.500e-49 Identity = 104/233 (44.64%), Postives = 154/233 (66.09%), Query Frame = 0 Query: 55 LAKRPNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKP-LLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFKTGPFDYTENLMNTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 L P LYVYDHCPFCVRAR+ GLK V H + F+ NDD+ PT+LVGKK+ PI + +G + ES+DIV+ VD D ++G P + + ++R D+KA+ S+ R RPR+ + + LPEF T +++ AFV+NH P + + ++ + L++++ EKLKDL+ LI DC TEGG+S DDID++ + R LT+VKGLV PPK++AY++ +AEK + PLY + + Sbjct: 26 LTPTPVLYVYDHCPFCVRARLALGLKGVRHDVRFMANDDVPLPTSLVGKKIAPIWD----DGSSAPYAESLDIVRNVDADDKYGPPGMFREMSDRTDLKAWQKSVQQPLRLLQRPRY-VKTYLPEFVTRSSKDAFVKNHQLPPSREAGLEERQS-NDAALIAEVNEKLKDLEPLICCEDCCTEGGLSLDDIDLWSRLRSLTIVKGLVFPPKVRAYMDNLAEKGDCPLYDAIAI 252
BLAST of NO05G01560 vs. NCBI_GenBank
Match: GAX13129.1 (glutaredoxin 2 [Fistulifera solaris]) HSP 1 Score: 202.6 bits (514), Expect = 1.600e-48 Identity = 103/243 (42.39%), Postives = 147/243 (60.49%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKP-LLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFD---------------YTENLMNTKL--VSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 PN+YVYDHCPFCVR R G+K + H + F+ NDD+ TPTALVGKK+ PI E + + + M ES+DI+ VD D R+G ++ PAT+R DIKA+ S+ L R RPR+ + +LPEF R AF+ NHP P++ Y E + + +L KL +LD +IFS + GG+SYDDID+F + R +T++K ++ P KL+AY++ M+E +IPLY +M L Sbjct: 54 PNVYVYDHCPFCVRVRFALGVKNIKHNIRFMANDDVPTPTALVGKKIAPIFEWPSAD---ICMAESLDIISLVDSDERFGPTGVILPATDRADIKAWQKSVQGLLRILQRPRYVATGLLPEFQQLDGRQAFIMNHPLP--PYEKAEWKEMGAEERLSIYAETMAKDPADEIEELNRKLVELDDIIFSQYHCSPGGLSYDDIDLFARLRSITIIKDVIWPSKLRAYMDGMSELGDIPLYDEMAL 291
BLAST of NO05G01560 vs. NCBI_GenBank
Match: GAX20106.1 (glutaredoxin 2 [Fistulifera solaris]) HSP 1 Score: 202.2 bits (513), Expect = 2.100e-48 Identity = 103/243 (42.39%), Postives = 147/243 (60.49%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKP-LLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFD---------------YTENLMNTKL--VSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 PN+YVYDHCPFCVR R G+K + H + F+ NDD+ TPTALVGKK+ PI E + + + M ES+DI+ VD D R+G ++ PAT+R DIKA+ S+ L R RPR+ + +LPEF R AF+ NHP P++ Y E + + +L KL +LD +IFS + GG+SYDDID+F + R +T++K ++ P KL+AY++ M+E +IPLY +M L Sbjct: 54 PNVYVYDHCPFCVRVRFALGVKNIKHNIRFMANDDVPTPTALVGKKIAPIFEWPSAD---ICMAESLDIISLVDSDERFGPTGVILPATDRADIKAWQKSVQGLLRILQRPRYVATGLLPEFQQLDGRQAFIMNHPLP--PYEKAEWKEMGAEERLSIYAETMAKDPADEIEELNRKLVELDDIIFSQYHCSPGGLSYDDIDLFARLRSITIIKDVIWPSKLRAYMDVMSELGDIPLYDEMAL 291
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_002182163.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46064.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 189.5 bits (480), Expect = 1.400e-44 Identity = 103/244 (42.21%), Postives = 144/244 (59.02%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGK-PLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFK-------TGP--------FDYTENLMNTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P +YVYDHCPFCVR R G+K V H + FL NDD+ TPTALVGKK+ P+ + +VM ES+DI + VD D R+G ++PAT R DI+ + S+ L R RPR+ + +LPEF AR AFV NH P++ GP + + T+ + L EKL +LD L+ S + GG+SYDD+D+F + R +T+VKG+ P KL+AY++ MAE ++PLY M + Sbjct: 65 PTVYVYDHCPFCVRVRFALGVKNVKHYVHFLANDDVPTPTALVGKKIAPVWVWPEAD---IVMAESLDICRLVDADERFGPVQAIRPATERTDIRDWQKSVQSLLRTLQRPRYVATGLLPEFQQRDARDAFVANHQLPPYEKNEWKGSDGPTLAEKWQLYRDARDADPTQHLQALNEKLVELDELLDSEYHCSPGGLSYDDVDLFARLRSVTIVKGVQWPTKLRAYMDYMAELGDVPLYDAMAM 305
BLAST of NO05G01560 vs. NCBI_GenBank
Match: EJK75937.1 (hypothetical protein THAOC_02323 [Thalassiosira oceanica]) HSP 1 Score: 186.4 bits (472), Expect = 1.200e-43 Identity = 99/247 (40.08%), Postives = 146/247 (59.11%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKP-LLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFKTGPFDYTENL----MNTKL--------------VSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LYVYDHCPFCVR R+ G+K V H + FL NDDI TPTALVGKK+ PI + + +M ES+DI+ VD D R+G + PA+ R DIKA+ S+ L R RPR+ + +LPEF R AF++NH P++ + T+ + M+TKL + DL +L +LD +++ +EGG S DDID++ + R +T++ G+ P KL+AY++ ++ ++PLY +M L Sbjct: 363 PVLYVYDHCPFCVRVRLAMGVKNVKHLIHFLANDDIATPTALVGKKIAPIFALPEDD---FIMMESLDIIAKVDTDERFGPTNQILPASGRTDIKAWQKSVQTLLRTLQRPRYVATGLLPEFQQLDGRHAFIKNHQLPPYEKPEWKGTDEIDGMDMDTKLKLYAEAMAADPAHMIEDLNARLVELDDMLYCEHYCSEGGFSLDDIDLWARLRSITIIAGVEWPSKLRAYMDNISALGDVPLYDEMAL 606
BLAST of NO05G01560 vs. NCBI_GenBank
Match: OLP96032.1 (Dihydroorotate dehydrogenase (quinone), mitochondrial [Symbiodinium microadriaticum]) HSP 1 Score: 186.0 bits (471), Expect = 1.600e-43 Identity = 108/224 (48.21%), Postives = 142/224 (63.39%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPFDYTENLMNTK-LVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQM 282 P LYVYDHCP+CVRARMIFGLK+ P +L FL NDD+ TPT ++GKKV+PI+E+ +G+ M ES+DIV VD PLL A REDI + DL R+ TRPR A+ ++ PEF T AARA +V+NH F+ E L ++ L+ + KL +L ++ S+ V EGG SYDDI +F R LT+VKG+ P KL+ Y E MAE ++PL M Sbjct: 1484 PTLYVYDHCPYCVRARMIFGLKKTPFKLDFLMNDDVVTPTKMIGKKVLPIMEI---DGE--AMGESLDIVAKVDALD--DSPLLAKAAGREDIAKWLSDNKDLLRKITRPRDAM-ALYPEFSTKAARATWVKNHQLSGMTFE--EALATSEPLMEEFNSKLPELSEMLHSSS-VNEGGYSYDDITLFPTLRRLTLVKGIHWPEKLRQYTEHMAEVCDVPLLDGM 1696
BLAST of NO05G01560 vs. NCBI_GenBank
Match: XP_005787117.1 (hypothetical protein EMIHUDRAFT_447067, partial [Emiliania huxleyi CCMP1516] >EOD34688.1 hypothetical protein EMIHUDRAFT_447067, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 185.7 bits (470), Expect = 2.100e-43 Identity = 104/243 (42.80%), Postives = 147/243 (60.49%), Query Frame = 0 Query: 59 PNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTALVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNREDIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNH---PFKTGPF-------------DYTENLMNT-KLVSDLGEKLKDLDGLIFSADCVTEG-GMSYDDIDVFGKTRGLTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL 284 P LYVYDHCPFCVR R+ G+ VPH+L+F+ NDD+ETPTA+VGKK+ PI V+ EG M ES+DI+ D + + PA+ R D+KA+ S+ L R+ RPR+ + LPEF A R AFV NH PF+ + Y+E T +L+++ K+ +L+G+I + + TEG G SYDD+D++ + R LTVVKGL + PK +AYL+ AE ++PLY M + Sbjct: 39 PELYVYDHCPFCVRVRVAAGVLGVPHKLVFMGNDDVETPTAMVGKKIAPI--WVDEEGP---MAESLDIIAKFDAGGQ-----IAPASGRTDLKAWQKSVQTLMRKLQRPRYVMVP-LPEFMQKAGRDAFVANHQMPPFEKSEWKGNPDMPLEQKYQKYSEAFAQTPELLAEANAKVAELEGMIHAPEACTEGLGFSYDDVDLWARLRSLTVVKGLQIGPKTRAYLDHFAEAGDVPLYDVMAV 270 The following BLAST results are available for this feature:
BLAST of NO05G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01560 ID=NO05G01560|Name=NO05G01560|organism=Nannochloropsis oceanica|type=gene|length=1077bpback to top protein sequence of NO05G01560.1 >NO05G01560.1-protein ID=NO05G01560.1-protein|Name=NO05G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
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