NO05G01340, NO05G01340 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G01340
Unique Name	NO05G01340
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	876
Alignment location	chr5:386114..386989 -

Link to JBrowse

Properties


Property Name	Value
Description	Brix domain protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:386114..386989 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007109	Brix

Homology

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_020591989.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Phalaenopsis equestris] >XP_020591990.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Phalaenopsis equestris])

HSP 1 Score: 387.5 bits (994), Expect = 3.700e-104
Identity = 184/291 (63.23%), Postives = 231/291 (79.38%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE+  YE+KR IR AL+EGKPIPTELR EEA+LR E+ LEDE T+ PRS +DDEY  A  +DPK+ +TTSR PS+ L QF+KE+K++FP+A  +NRG   + E+VE CR HDFTD+++V E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI + FT+ LGQR A+I+++ FP PK +TKR++TFAN  D I FRHH +EK  G K  V LKEVGPRF+L LFQ+KLGT++Q++A+ E+V RPYMNTAKKR +L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEATLRQEIDLEDEQTAVPRSLIDDEYANATVKDPKILLTTSRSPSAPLTQFVKELKIVFPNATRMNRGGQVIAEIVEVCRAHDFTDVILVHEHRGEPDGLIVCHLPFGPTAYFELLNVVTRHDIKDKQAVGTMSEAYPHLILDNFTTKLGQRTANIVRHLFPVPKPDTKRIITFANRSDYISFRHHVYEKRGGPK-SVELKEVGPRFELRLFQIKLGTIDQSEAQNEWVIRPYMNTAKKRNLL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_004499820.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cicer arietinum])

HSP 1 Score: 387.1 bits (993), Expect = 4.800e-104
Identity = 181/291 (62.20%), Postives = 233/291 (80.07%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE+  YE+KR IR ALQEGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY  A  +DPK+ +TTSRDPS+ L+QF+KE+ ++FP+AQ +NRG   + E++E+CR+HD+TD+++V E RG PDGL+VCHLP GPTAYF L NVV RH+I D+    T+ EAYPHLI + F++ LG+R A+ILKY FP PK +TKR+VTFAN+ D I FRHH +EK  G K  V LKE+GPRF+L L+Q+KLGT++QA+A+ E+V RPYMNT +KR+ L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALQEGKPIPTELRNEEAALRREIDLEDENTAVPRTHIDDEYAFAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRSHDYTDVILVHEHRGVPDGLIVCHLPYGPTAYFGLLNVVTRHEIRDKKAIGTMPEAYPHLILDNFSTKLGERTANILKYLFPVPKPDTKRIVTFANKSDYISFRHHIYEKQGGPK-SVELKEIGPRFELRLYQIKLGTVDQAEAQLEWVIRPYMNTTRKRKFL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_015965159.1 (U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 [Arachis duranensis] >XP_016202665.1 U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 [Arachis ipaensis])

HSP 1 Score: 386.3 bits (991), Expect = 8.200e-104
Identity = 180/291 (61.86%), Postives = 234/291 (80.41%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  R+R+EYLYRKSLEGKE+  YE+KR IR ALQEGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY  A  +DPK+ +TTSRDPS+ L+QF+KE+  +FP+AQ +NRG   + E++E+CR HD+TD+V+V E RG PDGL+VCHLP GPTAYF L NVV RH+I+D+    T+ EAYPHLIF+ F++ LG+R A+ILKY FP PK +TKR+VTF+N+ D + FRHH +EK  G K  + LKE+GPRF+L L+Q+KLGT++QA+A+ E+V RPYMNT+KKR+ L
Sbjct:    2 LRRNIRMRREYLYRKSLEGKERLLYEKKRKIREALQEGKPIPTELRNEEAALRREIDLEDENTAVPRTHIDDEYAHAAEKDPKILLTTSRDPSAPLQQFVKELSYVFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPYGPTAYFGLLNVVTRHEIKDKKAIGTMPEAYPHLIFDNFSTKLGERTANILKYLFPVPKPDTKRIVTFSNQSDYVSFRHHIYEKHGGPK-SIELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTSKKRKFL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_020686053.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Dendrobium catenatum] >XP_020686054.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Dendrobium catenatum] >XP_020686055.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Dendrobium catenatum] >PKU85430.1 hypothetical protein MA16_Dca003169 [Dendrobium catenatum])

HSP 1 Score: 386.3 bits (991), Expect = 8.200e-104
Identity = 184/291 (63.23%), Postives = 231/291 (79.38%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE+  YE+KR IR AL+EGKPIPTELR EEA+LR E+ LEDE T+ PRS +DDEY  A  +DPK+ +TTSR+PS+ L QF+KE+K++FP+A  +NRG   + E+VE CR HDFTD++++ E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI + FT+ LGQR A+ILK+ FP PK +TKR++T AN  D I FRHH +EK  G K  V LKEVGPRF+L LFQ+KLGT++Q++A+ E+V RPYMNTAKKR +L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDEQTAVPRSLIDDEYANATVKDPKILLTTSRNPSAPLTQFVKELKIVFPNATRMNRGGQVIKEIVEVCRAHDFTDVILLHEHRGEPDGLIVCHLPFGPTAYFELLNVVTRHDIKDKQAIGTMSEAYPHLILDNFTTKLGQRTANILKHLFPVPKPDTKRIITLANRSDYISFRHHVYEKRGGPK-SVELKEVGPRFELRLFQIKLGTVDQSEAQNEWVIRPYMNTAKKRNLL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_015960036.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Arachis duranensis])

HSP 1 Score: 384.8 bits (987), Expect = 2.400e-103
Identity = 179/291 (61.51%), Postives = 233/291 (80.07%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  R+R+EYLYRKSLEGKE+  YE+KR IR ALQEGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY     +DPK+ +TTSRDPS+ L+QF+KE+  +FP+AQ +NRG   + E++E+CR HD+TD+V+V E RG PDGL+VCHLP GPTAYF L NVV RH+I+D+    T+ EAYPHLIF+ F++ LG+R A+ILKY FP PK +TKR+VTF+N+ D + FRHH +EK  G K  + LKE+GPRF+L L+Q+KLGT++QA+A+ E+V RPYMNT+KKR+ L
Sbjct:    2 LRRNIRMRREYLYRKSLEGKERLLYEKKRKIREALQEGKPIPTELRNEEAALRREIDLEDENTAVPRTHIDDEYAHTAEKDPKILLTTSRDPSAPLQQFVKELSYVFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPYGPTAYFGLLNVVTRHEIKDKKAIGTMPEAYPHLIFDNFSTKLGERTANILKYLFPVPKPDTKRIVTFSNQSDYVSFRHHIYEKHGGPK-SIELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTSKKRKFL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_020976718.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Arachis ipaensis] >XP_020976719.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Arachis ipaensis] >XP_020976720.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Arachis ipaensis])

HSP 1 Score: 384.8 bits (987), Expect = 2.400e-103
Identity = 179/291 (61.51%), Postives = 233/291 (80.07%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  R+R+EYLYRKSLEGKE+  YE+KR IR ALQEGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY     +DPK+ +TTSRDPS+ L+QF+KE+  +FP+AQ +NRG   + E++E+CR HD+TD+V+V E RG PDGL+VCHLP GPTAYF L NVV RH+I+D+    T+ EAYPHLIF+ F++ LG+R A+ILKY FP PK +TKR+VTF+N+ D + FRHH +EK  G K  + LKE+GPRF+L L+Q+KLGT++QA+A+ E+V RPYMNT+KKR+ L
Sbjct:    2 LRRNIRMRREYLYRKSLEGKERLLYEKKRKIREALQEGKPIPTELRNEEAALRREIDLEDENTAVPRTHIDDEYAHTAEKDPKILLTTSRDPSAPLQQFVKELSYVFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPYGPTAYFGLLNVVTRHEIKDKKAIGTMPEAYPHLIFDNFSTKLGERTANILKYLFPVPKPDTKRIVTFSNQSDYVSFRHHIYEKHGGPK-SIELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTSKKRKFL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_003598694.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Medicago truncatula] >AES68945.1 U3 small nucleolar IMP4-like ribonucleoprotein [Medicago truncatula] >AFK38681.1 unknown [Medicago truncatula])

HSP 1 Score: 384.0 bits (985), Expect = 4.100e-103
Identity = 179/291 (61.51%), Postives = 231/291 (79.38%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EY+YRKSLEGKE+  YE KR IR AL+EGKPIPTELR EEA+LR E+ LEDE T+ PRSH+DDEY  A  +DPK+ +TTSRDPS+ LKQF+KE+ ++FP+A+ +NRG   + E++++CR+HD+TD+++V E RG PDGL+VCHLP GPTAYF L NVV RH+I DR    T+ EAYPH+I + F + LG+R A+ILK+ FP PK +TKR+VTFAN+ D I FRHH +EK  G K  V LKE+GPRF+L L+Q+KLGT++QA+A+TE+V RPYMNT +KR  L
Sbjct:    2 LRRNQRLRREYIYRKSLEGKERIHYENKRKIREALREGKPIPTELRNEEAALRREIDLEDENTAVPRSHIDDEYAFAAEKDPKILLTTSRDPSAPLKQFVKELSIVFPNAERMNRGGQVISEIIDSCRSHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIRDRKAVGTMPEAYPHIILDNFETKLGERTANILKHLFPVPKPDTKRIVTFANKSDYISFRHHIYEKQAGPK-SVELKEIGPRFELRLYQIKLGTVDQAEAQTEWVIRPYMNTTRKRNFL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_008788540.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Phoenix dactylifera])

HSP 1 Score: 384.0 bits (985), Expect = 4.100e-103
Identity = 178/291 (61.17%), Postives = 233/291 (80.07%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR TRLR+EYLYRKSLEGKE+  YE+KR IR AL+EGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY  A  +DPK+ +TTSR+PS+ L QF+KE+K +FP++  +NRG   + E++E+CR H+FTD+++V E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI + F++ LGQR A++LK+ FP PK  +KR++TFAN  D I FRHH +EK  G K  + LKEVGPRF+L L+Q+KLGT++Q++A+ E+V RP+MNTAKKR +L
Sbjct:    2 LRRNTRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDEYTAVPRTHIDDEYASASAKDPKILLTTSRNPSAPLTQFVKELKFVFPNSTRMNRGGQVISEIIESCRAHEFTDVILVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKAIGTMSEAYPHLILDNFSTKLGQRTANVLKHLFPVPKPNSKRIITFANRSDYISFRHHVYEKHGGPK-SIELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPFMNTAKKRNVL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: KRH29998.1 (hypothetical protein GLYMA_11G152600 [Glycine max])

HSP 1 Score: 383.6 bits (984), Expect = 5.300e-103
Identity = 180/291 (61.86%), Postives = 231/291 (79.38%), Query Frame = 0

Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE+  YE+KR IR ALQEGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY  A  +DPK+ +TTSRDPS+ L+QF+KE+  +FP+AQ +NRG   + E++E+CR HD+TD+V+V E RG PDGL+VCHLP GPTAYF L NVV RH+I+D+    T+ EAYPHLI + F++ LG R A+ILK+ FP PK +TKR+VTF+N+ D I FRHH +EK  G K  + LKE+GPRF+L L+Q+KLGT++QA+A+ E+V RPYMNT KKR+ L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALQEGKPIPTELRNEEAALRREIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSFVFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIKDKKAIGTMPEAYPHLILDNFSTKLGDRTANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPK-SIELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTTKKRKFL 291

[Close]

BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_023889637.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Quercus suber] >POE64567.1 u3 small nucleolar ribonucleoprotein imp4 [Quercus suber])

HSP 1 Score: 383.6 bits (984), Expect = 5.300e-103
Identity = 179/290 (61.72%), Postives = 230/290 (79.31%), Query Frame = 0

Query:    5 RRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            RR TRLR+EYLYRKSLEGKE+  YE+KR+I+ ALQEGKPIPTELR EEA LRH++ LEDE+T+ PR+H+DDEY  A  RDPK+ +TTSR+PS+ L QF+KE+K +FP+AQ +NRG   + E++E CR HDFTD+++V E RG PDG+ + HLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI   F++ LG+R A+ILK+ FP PK +TKR++TFANE D I FRHH +EK  G K  + LKEVGPRF++ L+++ LGTL+Q +A+TE+V RPYMNT KKR+ L
Sbjct:    3 RRNTRLRREYLYRKSLEGKERILYEKKRMIKEALQEGKPIPTELRNEEAELRHQIDLEDESTAVPRTHIDDEYANASERDPKILITTSRNPSAPLTQFVKELKFVFPNAQRMNRGGQVIKEIIETCRAHDFTDVILVHEHRGVPDGITISHLPFGPTAYFGLLNVVTRHDIKDKKAIGTMSEAYPHLILNKFSTKLGERTANILKHLFPVPKPDTKRIITFANESDYISFRHHIYEKHGGPK-SIELKEVGPRFEMRLYKITLGTLDQDEAQTEWVIRPYMNTTKKRKFL 291

The following BLAST results are available for this feature:

BLAST of NO05G01340 vs. NCBI_GenBank

BLAST of NO05G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_020591989.1	3.700e-104	63.23	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]
XP_004499820.1	4.800e-104	62.20	PREDICTED: U3 small nucleolar ribonucleoprotein pr...	[more]
XP_015965159.1	8.200e-104	61.86	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]
XP_020686053.1	8.200e-104	63.23	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]
XP_015960036.1	2.400e-103	61.51	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]
XP_020976718.1	2.400e-103	61.51	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]
XP_003598694.1	4.100e-103	61.51	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]
XP_008788540.1	4.100e-103	61.17	PREDICTED: U3 small nucleolar ribonucleoprotein pr...	[more]
KRH29998.1	5.300e-103	61.86	hypothetical protein GLYMA_11G152600 [Glycine max]	[more]
XP_023889637.1	5.300e-103	61.72	U3 small nucleolar ribonucleoprotein protein IMP4 ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL087	nonsL087	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003736	NSK003736	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G01340.1	NO05G01340.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|583835	gene_2925	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g57	gene2317	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G01340.1	NO05G01340.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G01340 ID=NO05G01340|Name=NO05G01340|organism=Nannochloropsis oceanica|type=gene|length=876bp
ATGAGCACCCTCCGAAGACAAACGCGGCTTCGGAAGGAGTACTTATATCG
GAAGTCTTTGGAAGGCAAGGAGAAGTCGGCGTATGAACGCAAGCGCCTGA
TCCGTACGGCCCTACAAGAAGGCAAGCCCATTCCCACGGAGCTGCGGGGC
GAGGAGGCCAGCTTGCGGCATGAGGTCGGGTTGGAGGACGAGGCAACCTC
CACACCTCGGTCGCACGTGGATGATGAGTATGGTTTGGCTGGCACGCGGG
ACCCAAAAGTTTGTGTGACCACGTCGCGTGATCCGTCCTCGCGGCTGAAG
CAGTTTATGAAGGAAGTCAAGCTCATCTTTCCCAGTGCCCAGGCAGTCAA
CAGAGGCAATACCAAGGTCCCCGAGCTGGTGGAAGCTTGTCGCACGCATG
ACTTTACGGATATTGTTATGGTTCAAGAAACGAGGGGGCAGCCCGATGGG
TTGCTGGTGTGTCACTTGCCTTTGGGTCCCACTGCTTATTTCACCTTGTC
GAATGTGGTGATGCGGCATGATATTGAAGACCGAGCTACGGTTTCGGAGG
CCTACCCTCACCTAATCTTTGAGGGATTTACGTCTAGCCTAGGGCAGAGG
GTGGCAGACATTTTGAAGTATACGTTTCCGGCGCCAAAGGCCGAGACGAA
GCGGGTGGTGACGTTTGCGAATGAGGATGACCAGATCGTGTTTCGGCATC
ACACTTTTGAGAAGGCTCCGGGAGTGAAGGGGGAGGTGACTCTCAAGGAG
GTGGGGCCTCGGTTTGATCTGACCTTGTTTCAAGTCAAATTGGGAACGTT
GGAGCAGGCGGATGCGGAAACAGAGTATGTTTTCAGGCCGTACATGAACA
CAGCCAAGAAGAGGAGGATGCTTTAA

protein sequence of NO05G01340.1

>NO05G01340.1-protein ID=NO05G01340.1-protein|Name=NO05G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MSTLRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRG
EEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLK
QFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDG
LLVCHLPLGPTAYFTLSNVVMRHDIEDRATVSEAYPHLIFEGFTSSLGQR
VADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKE
VGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML*

Synonyms

Publications