NO05G01270, NO05G01270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01270 vs. NCBI_GenBank
Match: ORE05086.1 (ARM repeat-containing protein [Rhizopus microsporus var. microsporus]) HSP 1 Score: 82.4 bits (202), Expect = 6.200e-12 Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQA 473 SR +WVGN+ N + E L ++F +G +ESVR+L + F H + +A+RAK+ D +GG++ ++I F +++P R++ + N+P TT A L +F FG +E V + N GF+ E VE A Sbjct: 365 SRSLWVGNIDNSITIETLTQVFSMFGPIESVRLLLEKECAFINFFHIE---DAVRAKE--DVLTHMGGRIGSCIVRIGFGKADAAVTETNVSQPTRALWLGNIPGNTTPASLQSIFGTFGTIESVRVLSHKNCGFINFETVEDA 503
BLAST of NO05G01270 vs. NCBI_GenBank
Match: XP_023460956.1 (ARM repeat-containing protein [Rhizopus microsporus ATCC 52813] >PHZ07248.1 ARM repeat-containing protein [Rhizopus microsporus ATCC 52813]) HSP 1 Score: 82.4 bits (202), Expect = 6.200e-12 Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQA 473 SR +WVGN+ N + E L ++F +G +ESVR+L + F H + +A+RAK+ D +GG++ ++I F +++P R++ + N+P TT A L +F FG +E V + N GF+ E VE A Sbjct: 364 SRSLWVGNIDNSITIETLTQVFSMFGPIESVRLLLEKECAFINFFHIE---DAVRAKE--DVLTHMGGRIGSCIVRIGFGKADAAVTETNVSQPTRALWLGNIPGNTTPASLQSIFGTFGTIESVRVLSHKNCGFINFETVEDA 502
BLAST of NO05G01270 vs. NCBI_GenBank
Match: OON05262.1 (hypothetical protein BSLG_04816 [Batrachochytrium salamandrivorans]) HSP 1 Score: 81.3 bits (199), Expect = 1.400e-11 Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQFQSRGI------NRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476 SR +WVGN+ + L IF +G +ES+RML P+ F++F +A+ A++++ GG++ N +++ F +P +SI + N+ P T ADL +FS FG+VE A V + N GF+ ++ A RA Sbjct: 52 SRSLWVGNIDALLSSTDLHAIFAPFGFIESIRML---PEKECAFINFVSMEDAVHARQKMH-----GGRIRNNIVRVGFGKSDSGTEVHGTQPTKSIWIGNISPTTNPADLESIFSRFGQVESARVLTHKNCGFVNFVRLQDALRA 189
BLAST of NO05G01270 vs. NCBI_GenBank
Match: ORY36917.1 (ARM repeat-containing protein [Rhizoclosmatium globosum]) HSP 1 Score: 79.7 bits (195), Expect = 4.000e-11 Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGG--KLPQNAMKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRAMARWHDNVWRGRHFFIDYA 495 SR +WVGNL + + + +F YG +ES+RML P F+++ +A+ AK+ + GK G +L + ++G+ +P +S+ + N+PP DL +LF+ FG VE V + + GF+ EN++ A A + G + +A Sbjct: 376 SRSLWVGNLDSQISAPEILNLFSPYGAIESLRML---PDKECVFVNYTRVEDALAAKESMTGKKIGNGVIRLGFGKNEAVGDTQGM-QPTKSVWIGNIPPTLLPTDLEKLFTAFGPVESCRVLTHKSCGFVNFENLQHAMVAQQSMNGREVHGMQIKVGFA 532
BLAST of NO05G01270 vs. NCBI_GenBank
Match: ORY89931.1 (armadillo-type protein [Syncephalastrum racemosum]) HSP 1 Score: 79.3 bits (194), Expect = 5.300e-11 Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = 0 Query: 334 AGSRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476 A +R +W+GN+ V ++L ++F +G +ESVR+L + F H + +AIRAK+E+ G+ +GG++ ++I F +P R++ + N+PP T + L +FS FG +E V + N GF+ E VE A +A Sbjct: 419 AATRSLWIGNVDATVSVDNLTQMFSVFGPIESVRLLLEKECAFVNFFHVE---DAIRAKEEVLGR--LGGRVGNCIVRIGFGRADAAVPDTSALQPTRALWLGNIPPGTAPSALQHMFSPFGIIESVRVLSHKNCGFVNFELVESAAKA 562
BLAST of NO05G01270 vs. NCBI_GenBank
Match: XP_007395971.1 (hypothetical protein PHACADRAFT_256428 [Phanerochaete carnosa HHB-10118-sp] >EKM55651.1 hypothetical protein PHACADRAFT_256428 [Phanerochaete carnosa HHB-10118-sp]) HSP 1 Score: 79.0 bits (193), Expect = 6.900e-11 Identity = 55/185 (29.73%), Postives = 85/185 (45.95%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKEL-----------------------DGKPFV---------------GGKLPQNA-------MKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476 +R +W+GNL + V E L +F YG +ES+R+L P+ GF++F + A+AIRAK ++ D P GG + +NA M Q QS P R++ + ++P TT A ++ +FS FG +E A V + N GF+ E ++ A RA Sbjct: 444 TRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLL---PEKECGFVNFVDQADAIRAKDDVLNRLGGDIGMPNGQTVRIGFGKADSAPVAPAKGTNLNSPVATSPGGNVSKNASNAGLAGMDAQLQS----TPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLTHKNCGFINFERLDDAVRA 621
BLAST of NO05G01270 vs. NCBI_GenBank
Match: CDS07619.1 (hypothetical protein LRAMOSA01568 [Lichtheimia ramosa]) HSP 1 Score: 79.0 bits (193), Expect = 6.900e-11 Identity = 48/153 (31.37%), Postives = 78/153 (50.98%), Query Frame = 0 Query: 334 AGSRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-----------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476 A +R +W+GN+ + + L IF +G +ESVR+L P F++F +A+RAK EL K + +L +K+ F + P R++ + N+P TT + L+ +FS FG +E V + N GF+ E++E A RA Sbjct: 382 APTRSLWLGNIDPSLTTQDLNCIFSPFGAIESVRIL---PDRECAFVNFTSLEDALRAKDELVHK--MNSRLGNTPVKVGFGKPEPPTCGDIGANAQQEPTRALWIGNIPATTTYSTLLSIFSPFGAIESVRVLTHKNCGFVNFESLEDAVRA 529
BLAST of NO05G01270 vs. NCBI_GenBank
Match: PFH46355.1 (hypothetical protein AMATHDRAFT_70076 [Amanita thiersii Skay4041]) HSP 1 Score: 79.0 bits (193), Expect = 6.900e-11 Identity = 53/187 (28.34%), Postives = 85/187 (45.45%), Query Frame = 0 Query: 334 AGSRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKEL-----------------------DGKPF----------------------VGGKLPQNAMKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476 A +R +W+GNL + V E L +F YG +ES+R+L P+ GF++F + A+AIRAK+++ D P GG N++ Q QS P R++ + ++P TT A ++ +FS +G +E A V + N GF+ E ++ A RA Sbjct: 445 APTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLL---PEKECGFVNFVDQADAIRAKEDVLNRLGGNIGMPNGQTVRIGFGKADSAPVAPAKGNXXXXXXXXXXXXXGKATGGSTNVNSLDAQLQS----TPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRA 624
BLAST of NO05G01270 vs. NCBI_GenBank
Match: CEI99779.1 (hypothetical protein RMCBS344292_13860 [Rhizopus microsporus]) HSP 1 Score: 78.2 bits (191), Expect = 1.200e-10 Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQA 473 SR +WVGN+ + + E L ++F +G +ESVR+L + F++F +A+RAK+ D +GG++ ++I F +++P R++ + N+P TT A L +F FG +E V + N F+ E VE A Sbjct: 365 SRSLWVGNIDSSITIETLTQVFSMFGPIESVRLLL---EKECAFINFFHVEDAVRAKE--DVLTHMGGRIGNCIVRIGFGKADAAVTETNVSQPTRALWLGNIPGNTTPASLQSIFGTFGTIESVRVLSHKNCSFINFETVEDA 503
BLAST of NO05G01270 vs. NCBI_GenBank
Match: KIM48942.1 (hypothetical protein M413DRAFT_6202 [Hebeloma cylindrosporum h7]) HSP 1 Score: 78.2 bits (191), Expect = 1.200e-10 Identity = 50/175 (28.57%), Postives = 79/175 (45.14%), Query Frame = 0 Query: 336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKEL-----------------------------------DGKPFVGGKLPQNAMKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476 +R +W+GNL + V E L +F YG +ES+R+L P+ GF++F + A+AIRAK ++ G G M Q QS P R++ + ++P TT A ++ +FS +G +E A V + N GF+ E ++ A RA Sbjct: 454 TRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLL---PEKECGFVNFVDQADAIRAKDDVLNRLGGNIGMPNLARLAPVAPAKGNXXXXXXXXXXXGPKSAGNNAGLGGMDAQLQS----TPTRALWIGSIPSSTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRA 621 The following BLAST results are available for this feature:
BLAST of NO05G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01270 ID=NO05G01270|Name=NO05G01270|organism=Nannochloropsis oceanica|type=gene|length=2819bpback to top protein sequence of NO05G01270.1 >NO05G01270.1-protein ID=NO05G01270.1-protein|Name=NO05G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=718bpback to top Synonyms
Publications
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