NO05G01210, NO05G01210 (gene) Nannochloropsis oceanica

Overview
NameNO05G01210
Unique NameNO05G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1530
Alignment locationchr5:350943..352472 +

Link to JBrowse

Properties
Property NameValue
Description26s proteasome non-atpase regulatory subunit rpn12a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:350943..352472 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005838proteasome regulatory particle
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR00674626S_Psome_Rpn12
IPR033464CSN8_PSD8_EIF3K
Homology
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: EWM28150.1 (26s proteasome non-atpase regulatory subunit rpn12a [Nannochloropsis gaditana])

HSP 1 Score: 434.9 bits (1117), Expect = 1.900e-118
Identity = 222/269 (82.53%), Postives = 246/269 (91.45%), Query Frame = 0 
Query:    1 MALQQGITMAKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            MAL+QG  +  KLQSAV++D L EA+++LGELKVLLT F+SLPPMNQPSPHA EE ALGRQVLEQAVFLA+KQ+DK AFQRQMAQLKPYYQD  GLGL +S LRMPILGLNLLFLLVENRLAEFHSELEHL+EAERA+ YVSFPILVEQQLMVGSYHKVLE+RT TPHPGYAFFMSLLVDTVRDAVADCSE AY +L + AAK+I+LL+SD ALAEYAA KHPDW+V GDGFV+FGKDHGPKQ+KA+DVPSLRLI+ETLSYATELERIV
Sbjct:    1 MALEQGEKLVIKLQSAVESDHLGEAASLLGELKVLLTNFESLPPMNQPSPHASEECALGRQVLEQAVFLAVKQRDKIAFQRQMAQLKPYYQD-KGLGLTDSALRMPILGLNLLFLLVENRLAEFHSELEHLSEAERANVYVSFPILVEQQLMVGSYHKVLEARTRTPHPGYAFFMSLLVDTVRDAVADCSEAAYERLGIGAAKEILLLESDTALAEYAAVKHPDWRVDGDGFVYFGKDHGPKQAKASDVPSLRLISETLSYATELERIV 268
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: CBN77843.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 241.5 bits (615), Expect = 3.000e-60
Identity = 130/267 (48.69%), Postives = 179/267 (67.04%), Query Frame = 0 
Query:    3 LQQGITMAKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            L +G  +    +++ +   + +A ++L +LK+L+T FDSLPPM    P+A  ER L R V+E AVFL+ ++ D  AFQR MAQLKP   D     LP S  +  +LGLNLLFLLVENRLAEFHSELE + +AERAS  V FP+ +EQ LMVGSY +VL +R H PH  Y +F+  L+ TVRD +A+CSE AY +LS+A A+ ++ +D  + L  + A K+P+W++  D  +    +      K+A++PS+RLIAE LSYATELERIV
Sbjct:    4 LAEGEQLFASFRASAEKGDIQKAKSLLTQLKILMTTFDSLPPMGAEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPLCMDFVS-QLPPSPNQSAVLGLNLLFLLVENRLAEFHSELELMGDAERASECVMFPVRLEQFLMVGSYDQVLAARDHVPHEYYKYFLESLLGTVRDGIAECSEAAYSELSIAEAQKMLRMDQRSELEAFVADKYPEWELTADKIIFKAPE---ACKKSAEIPSMRLIAECLSYATELERIV 266
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: ETI53533.1 (hypothetical protein F443_03547 [Phytophthora parasitica P1569] >ETI53534.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK93397.1 hypothetical protein L915_03430 [Phytophthora parasitica] >ETK93398.1 hypothetical protein, variant [Phytophthora parasitica] >ETL46807.1 hypothetical protein L916_03382 [Phytophthora parasitica] >ETL46808.1 hypothetical protein, variant [Phytophthora parasitica] >ETL99927.1 hypothetical protein L917_03309 [Phytophthora parasitica] >ETL99928.1 hypothetical protein, variant [Phytophthora parasitica] >ETO82211.1 hypothetical protein F444_03615 [Phytophthora parasitica P1976] >ETO82212.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETO82217.1 hypothetical protein F444_03620 [Phytophthora parasitica P1976] >ETP23340.1 hypothetical protein F441_03541 [Phytophthora parasitica CJ01A1] >ETP23341.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP51330.1 hypothetical protein F442_03527 [Phytophthora parasitica P10297] >ETP51331.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF93657.1 Acyl-coenzyme A oxidase [Phytophthora nicotianae])

HSP 1 Score: 220.3 bits (560), Expect = 7.200e-54
Identity = 125/260 (48.08%), Postives = 173/260 (66.54%), Query Frame = 0 
Query:   10 AKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            A+ L++AVD  Q+ EA+ +L +LK+ LT   +LPP    SP+A +E  L R VLE A  L++ ++D TAF+R M QLK YY      GL  S L  PILG  LL LLVENR+AEFH+ELE L E  R    ++F + +EQ LM G+Y+KVLESRT+ P+P + FF+S L+ TVR+ +ADC+E AY  L+++ A+ +++ DS A L+ Y   + P+W V  +G V F      K   A+D+PSLRL+ ETL+YATEL+RIV
Sbjct:   12 AQVLRAAVDGKQVDEATKLLAQLKMALTKLPALPPCGIDSPNAKQELQLARHVLESATLLSILREDMTAFERSMIQLKIYYNS----GLERSPLHYPILGTRLLQLLVENRMAEFHNELELLPEQSRQDPNIAFAVKLEQYLMEGTYNKVLESRTNVPNPYFPFFLSQLLQTVRENIADCAEVAYQCLTLSDAQKMLIFDSAAELSAYIQEEKPEWVV-REGRVWFKAPE--KSLGASDIPSLRLVGETLAYATELDRIV 264
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: XP_008900730.1 (hypothetical protein PPTG_08401 [Phytophthora parasitica INRA-310] >XP_008900731.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN13653.1 hypothetical protein PPTG_08401 [Phytophthora parasitica INRA-310] >ETN13654.1 hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 219.9 bits (559), Expect = 9.400e-54
Identity = 125/260 (48.08%), Postives = 172/260 (66.15%), Query Frame = 0 
Query:   10 AKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            A+ L++AVD  Q+ EA+ +L +LK+ LT   +LPP    SP+A +E  L R VLE A  L++ ++D TAF+R M QLK YY      GL  S L  PILG  LL LLVENR+AEFH+ELE L E  R    ++F + +EQ LM G+Y+KVLESRT+ P+P + FF+S L+ TVR+ +ADC+E AY  L+++ A+ +++ DS A L  Y   + P+W V  +G V F      K   A+D+PSLRL+ ETL+YATEL+RIV
Sbjct:   12 AQVLRAAVDGKQVDEATKLLAQLKMALTKLPALPPCGIDSPNAKQELQLARHVLESATLLSILREDMTAFERSMIQLKIYYNS----GLERSPLHYPILGTRLLQLLVENRMAEFHNELELLPEQSRQDPNIAFAVKLEQYLMEGTYNKVLESRTNVPNPYFPFFLSQLLQTVRENIADCAEVAYQCLTLSDAQKMLIFDSAAELTAYIQEEKPEWVV-REGRVWFKAPE--KSLGASDIPSLRLVGETLAYATELDRIV 264
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: XP_010055889.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Eucalyptus grandis] >KCW72444.1 hypothetical protein EUGRSUZ_E00889 [Eucalyptus grandis])

HSP 1 Score: 219.9 bits (559), Expect = 9.400e-54
Identity = 120/258 (46.51%), Postives = 168/258 (65.12%), Query Frame = 0 
Query:   12 KLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            + ++A+  +  +  + +L +LKVLLT F+SLPP+ + +P+A  E  L R + E AV L++K +D+ AF+R   QLKPYY DA G  +P S    PILGLNLL LLV+NR+AEFH+ELE L+ A   +  +   + +EQ  M G+Y++VL +R   PH  Y +FM LL  TVRD +A CSE AY  LS+  A+ ++L  SD  LAEY   +HP+W++   G V+F K      SK  ++PSL+LI +TLSYA ELERIV
Sbjct:   14 RFKAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGC-IPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSIGDARQMLLFSSDQELAEYIKEEHPEWEI-KSGSVYFQKAKESAPSK--EIPSLQLINQTLSYARELERIV 267
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: ETM53089.1 (hypothetical protein L914_03411 [Phytophthora parasitica] >ETM53090.1 hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 219.5 bits (558), Expect = 1.200e-53
Identity = 125/260 (48.08%), Postives = 172/260 (66.15%), Query Frame = 0 
Query:   10 AKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            A+ L++AVD  Q+ EA+ +L +LK+ LT   +LPP    SP+A +E  L R VLE A  L++ ++D TAF+R M QLK YY      GL  S L  PILG  LL LLVENR+AEFH+ELE L E  R    ++F + +EQ LM G+Y+KVLESRT+ P+P + FF+S L+ TVR+ +ADC+E AY  L+++ A+  ++ DS A L+ Y   + P+W V  +G V F      K   A+D+PSLRL+ ETL+YATEL+RIV
Sbjct:   12 AQVLRAAVDGKQVDEATKLLAQLKMALTKLPALPPCGIDSPNAKQELQLARHVLESATLLSILREDMTAFERSMIQLKIYYNS----GLERSPLHYPILGTRLLQLLVENRMAEFHNELELLPEQSRQDPNIAFAVKLEQYLMEGTYNKVLESRTNVPNPYFPFFLSQLLQTVRENIADCAEVAYQCLTLSDAQKTLIFDSAAELSAYIQEEKPEWVV-REGRVWFKAPE--KSLGASDIPSLRLVGETLAYATELDRIV 264
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: KUF78663.1 (26S proteasome non-ATPase regulatory subunit 8 A [Phytophthora nicotianae])

HSP 1 Score: 219.5 bits (558), Expect = 1.200e-53
Identity = 125/260 (48.08%), Postives = 172/260 (66.15%), Query Frame = 0 
Query:   10 AKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            A+ L++AVD  Q+ EA+ +L +LK+ LT   +LPP    SP+A +E  L R VLE A  L++ ++D TAF+R M QLK YY      GL  S L  PILG  LL LLVENR+AEFH+ELE L E  R    ++F + +EQ LM G+Y+KVLESRT+ P+P + FF+S L+ TVR+ +ADC+E AY  L+++ A+ +++ DS A L  Y   + P+W V  +G V F      K   A+D+PSLRL+ ETL+YATEL+RIV
Sbjct:   12 AQVLRAAVDGKQVDEATKLLAQLKMALTKLPALPPCGIDSPNAKQELQLARHVLESATLLSILREDMTAFERSMIQLKIYYNS----GLERSPLHYPILGTRLLQLLVENRMAEFHNELELLPEQSRQDPNIAFAVKLEQYLMEGTYNKVLESRTNVPNPYFPFFLSQLLQTVRENIADCAEVAYQCLTLSDAQKMLIFDSAAELXAYIQEEKPEWVV-REGRVWFKAPE--KSLGASDIPSLRLVGETLAYATELDRIV 264
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: XP_010259845.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A-like [Nelumbo nucifera])

HSP 1 Score: 218.8 bits (556), Expect = 2.100e-53
Identity = 121/255 (47.45%), Postives = 169/255 (66.27%), Query Frame = 0 
Query:   15 SAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            ++V NDQ    + +L +LKVLLTGF SLPP+ + SP A  E  + R + E AV L++K +D+ AF+R   QLKPYY D AG  LP S  + PILGLNLL LLV+NR+AEFH+ELE L+     +  +   + +EQ  M G+Y++VL +R   PH  Y +FM LL  TVRD +A CSE AY  LS++ AK +++  S+  L+EY   +HP+W++  +GFV+F K    + +   ++PSL+LI +TLSYA ELERIV
Sbjct:   18 ASVRNDQ-DTCTKLLSQLKVLLTGFKSLPPLFEESPDAIYELTIARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYTD-AGHRLPPSPQQYPILGLNLLRLLVQNRIAEFHTELELLSATTLENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSISDAKQMLMFSSEQELSEYITEEHPEWEI-KNGFVYFQK--AKESAPCKEIPSLQLINQTLSYARELERIV 267
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: GAQ91151.1 (Hypothetical protein KFL_007350010 [Klebsormidium nitens])

HSP 1 Score: 218.0 bits (554), Expect = 3.600e-53
Identity = 125/271 (46.13%), Postives = 180/271 (66.42%), Query Frame = 0 
Query:    3 LQQGITMAKK----LQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            +++G+  A K    L+S+  +  +A     LG+LK+ +T F +LPP+ Q +P   EE +LGR+VLE AV L +K++D+  F+RQ  QLKPYY D     +P S+    I GLNLL LLV+NR++EFH+ELE +  A+ +S ++ + I +EQ LM G+Y KVL SRT+ P   YAFF++LL+DTVRD +A CSE AY  LS+A AK +MLL +D  +A++A  +  DW +  +G ++F K +    SK  D+PS +LI +TL YA ELERIV
Sbjct:    1 MERGLAEAGKLLQGLRSSFQSGDVASCQQHLGQLKIRMTQFPALPPLFQKTPTQKEELSLGREVLEYAVLLTVKKEDEAGFERQFLQLKPYYVDTRN-SIPPSSREQLITGLNLLRLLVQNRISEFHTELELIPSAQHSSPFIRYAIELEQSLMEGAYQKVLNSRTNLPDQSYAFFVNLLLDTVRDEIAGCSEKAYDFLSLAEAKKMMLLKTDQEVADFAGMR--DWDI-KNGSIYFRKINEEAISK--DIPSHQLITQTLGYARELERIV 265
[Close]
BLAST of NO05G01210 vs. NCBI_GenBank
Match: XP_006343823.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Solanum tuberosum])

HSP 1 Score: 217.6 bits (553), Expect = 4.600e-53
Identity = 120/259 (46.33%), Postives = 167/259 (64.48%), Query Frame = 0 
Query:   11 KKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSPHAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPESTLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQLMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVAAAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVPSLRLIAETLSYATELERIV 270
            ++ ++A   +     + +L +LKVLLT F SLPP+ Q + +A  E  + R + E AV L++K +D+ AF+R   QLKPYY DA G  LP S    PILGLNLL LLV+NR+AEFH+ELE L+++   +  +   + +EQ  M G+YH+VL +R   P   YA+FM LL  TVRD +A CSE AY +LS + A+ I+L  SD  L +Y  T+HP+W++  DGF+ F K       K  ++PSL+LI +TLSYA ELERIV
Sbjct:   13 ERFKAAFVRNDFDTCTRLLSQLKVLLTAFTSLPPLFQETSNAIHELTIARDIYEHAVVLSVKMEDQDAFERDFFQLKPYYTDARG-RLPASPQEYPILGLNLLRLLVQNRIAEFHTELELLSQSALDNPCIKHAVELEQSFMEGAYHRVLSARQTVPDATYAYFMDLLAKTVRDEIAGCSEKAYDRLSTSDARQILLFSSDKELLQYVETEHPEWEI-KDGFIIFQKVKDSVPCK--EIPSLQLITQTLSYARELERIV 267
The following BLAST results are available for this feature:
BLAST of NO05G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28150.11.900e-11882.5326s proteasome non-atpase regulatory subunit rpn12... [more]
CBN77843.13.000e-6048.69conserved unknown protein [Ectocarpus siliculosus][more]
ETI53533.17.200e-5448.08hypothetical protein F443_03547 [Phytophthora para... [more]
XP_008900730.19.400e-5448.08hypothetical protein PPTG_08401 [Phytophthora para... [more]
XP_010055889.19.400e-5446.51PREDICTED: 26S proteasome non-ATPase regulatory su... [more]
ETM53089.11.200e-5348.08hypothetical protein L914_03411 [Phytophthora para... [more]
KUF78663.11.200e-5348.0826S proteasome non-ATPase regulatory subunit 8 A [... [more]
XP_010259845.12.100e-5347.45PREDICTED: 26S proteasome non-ATPase regulatory su... [more]
GAQ91151.13.600e-5346.13Hypothetical protein KFL_007350010 [Klebsormidium ... [more]
XP_006343823.14.600e-5346.33PREDICTED: 26S proteasome non-ATPase regulatory su... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003748NSK003748Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01210.1NO05G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583785gene_2912Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g46gene2306Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01210.1NO05G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01210 ID=NO05G01210|Name=NO05G01210|organism=Nannochloropsis oceanica|type=gene|length=1530bp
GTCGTCGTTGGCGAGAGGCTGGCGAGAGCGTTGCGAAGCCGAATGCGTTC
TTATAGCCTTGTCGCCACCCTCATACCACGCAATGACAAACATAATCACG
TCTAGATTGTCAGGCATGTTCTTTGATCTGTGATCCTCCATACGCCTGCT
AGTTTCCTTTCTCACAAGTTATTCCTGCCCTCATTACCACATCTAGGCTA
GCCCAGAATCATAAGCATCGCCAAGTTTTCGCACACAACCATGGCGCTGC
AACAAGGCATCACGgtacgcgttactaaagggtgggtgtgggaggggtgt
ttggatgctgctagatgagcgattgttgggttcgggaatacaagctgctc
gctttccctcattccccccctcccttcctcgtcttggacccgcgacgcca
tctcgtggtcgatacagctttgcgaggaatgattgagacgtacaagatga
gatgctgcacaaactggccctggagattctgaacgctatttgcaaagcgt
cagtctggtcccgcttcccttttctcgtttcttcccacttagcccatttc
tctctcctctacgcatcgacacactcttcccccatcacagATGGCCAAGA
AGCTCCAGTCTGCCGTTGACAACGACCAACTCGCGGAGGCCTCCGCGATC
CTAGGGGAACTCAAGGTCCTGCTCACGGGCTTTGACTCCCTCCCACCCAT
GAACCAACCCTCCCCCCACGCACCAGAAGAACGTGCCTTGGGTCGCCAAG
TGCTTGAACAAGCCGTCTTCCTCGCCCTGAAACAGCAAGACAAAACCGCC
TTCCAACGCCAAATGGCGCAACTGAAGCCTTATTATCAAGATGCTGCAGG
ACTAGGGCTGCCGGAGTCGACGCTGCGCATGCCTATCCTAGGACTAAATT
TATTGTTTTTGCTCGTCGAAAACCGCCTGGCCGAGTTCCACTCTGAGCTC
GAACATCTGACGGAAGCTGAACGTGCGAGCACCTACGTCTCCTTCCCCAT
TTTGGTGGAGCAACAGCTGATGGTTGGGTCATACCACAAGGTGCTGGAAT
CAAGGACTCACACCCCTCACCCCGGCTATGCCTTTTTCATGTCCCTGCTC
GTTGATACGGTACGGGACGCCGTAGCGGACTGCTCTGAGACAGCATATGT
ACAATTGAGCGTGGCGGCGGCCAAGGATATCATGTTACTGGATTCAGATG
CCGCGCTGGCGGAGTACGCGGCGACCAAGCACCCGGATTGGAAGGTGGGA
GGAGATGGGTTTGTCCATTTTGGGAAGGACCATGGGCCGAAGCAGAGCAA
GGCGGCGGATGTACCCTCGTTGCGCTTGATTGCCGAGACCTTGTCGTATG
CAACGGAATTGGAGAGGATCGTATAATACTTGGGAACAAGGGGACGTTTG
GCTTTTGAAAGGAGTGCGGAGGTTGGGAGAGCATGTGAAATGTGAAGTTA
CAGCACGGAGAAACGATGAAAAGGAACATAGGCAATGCGGACTCGCGGAT
AGTGGATGGAAAAAAACACATGGCATTGGC
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protein sequence of NO05G01210.1

>NO05G01210.1-protein ID=NO05G01210.1-protein|Name=NO05G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MALQQGITMAKKLQSAVDNDQLAEASAILGELKVLLTGFDSLPPMNQPSP
HAPEERALGRQVLEQAVFLALKQQDKTAFQRQMAQLKPYYQDAAGLGLPE
STLRMPILGLNLLFLLVENRLAEFHSELEHLTEAERASTYVSFPILVEQQ
LMVGSYHKVLESRTHTPHPGYAFFMSLLVDTVRDAVADCSETAYVQLSVA
AAKDIMLLDSDAALAEYAATKHPDWKVGGDGFVHFGKDHGPKQSKAADVP
SLRLIAETLSYATELERIV*
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Synonyms
Publications