NO05G01140, NO05G01140 (gene) Nannochloropsis oceanica

Overview
NameNO05G01140
Unique NameNO05G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3241
Alignment locationchr5:334123..337363 -

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Properties
Property NameValue
DescriptionLipin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:334123..337363 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR013209LNS2
IPR031315LNS2/PITP
Homology
BLAST of NO05G01140 vs. NCBI_GenBank
Match: EWM28252.1 (lipin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 506.5 bits (1303), Expect = 1.100e-139
Identity = 311/601 (51.75%), Postives = 353/601 (58.74%), Query Frame = 0
Query:    1 MNVARDVIFTQGDGGLLHSTAFVVNFKPVGTLYKWLVSRPALAPLHLGGSTHPPSPSPSLRQALSVPSTAATTTNMSAQKGSSNVDSPRS--SASWAGSRYGSDDGNCDDVFNEEEDRREGPANTLASFILSSIGFTGSPFPXXXXXXXXXXXXXXXXXXXXXXXXXXEIRS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQSLSQLGKERGEG--VGLLRDGANPVEFVYCSPYGDLSVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEVRMFASYKE-SSFSSFPRPFDWRRSLSPNAM---SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGPAQGVMA--MSRGRYEGEGGKEGGKDEEGHTTTTFDSYSDERLLRLLERRLARDAEGKDEHENV 588
            MNVARDV+   G+ G+LHSTAFVV+FKPV +LYKWLV RP L  LH              R+  S   TA     +  ++ S  V +  +  +     S  G  DG+ D         R GPANTLAS ILSSIG T  P P                             S                                           EGVEVYVRG LV  LEMVVD  GACVFA+TGT  PS AALQSL  L + +GE    GLL+ G NPV+FVYC+PYGD+SV+ATFHLWG+RDRVVVSDIDGTITKSDIRGYI SVHLG+H +TH+GIGRLFSHL  AHHLRFVYLTSRPISLL+ATR YLANV Q+EG+ LP GPVFTSMDSLTRVLY+ELVEKTIRYMKAQVLN+I STF +AGRPE D+VFL GFGNKSADGQAYEM GVDP SIFIINP+SEVRMFASYKE SSFSS P  +  R  ++ N     S                               D G    + +  M R   EG+G      DE  H   TF SYSD RLLRLLE+RLA D EG+    +V
Sbjct:    1 MNVARDVVLAHGEDGILHSTAFVVSFKPVNSLYKWLVGRPVLESLH-------------ARRGRSSGETATNEEGIETREDSRGVGATGATHAQGMPSSSAGELDGDLD---------RRGPANTLASSILSSIGLTALPHPPTAAIERGGVARAAHETSSLAHGEAQSRVSGQNKSFKQLKMPSSGLDPRAPAPDRPQEKEAPLDGGFHKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVSVRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEVRMFASYKESSSFSSSPSSYPSREGIAANRTCEGSKQDPQSGTESAAYRHVDRGSSQEEHRENSDSDGGSTSSMQSIRMDRNVSEGKG------DEGSHHGATFASYSDARLLRLLEQRLA-DVEGEQSRNDV 572          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: OWZ21690.1 (Lipin [Phytophthora megakarya])

HSP 1 Score: 151.4 bits (381), Expect = 8.900e-33
Identity = 97/266 (36.47%), Postives = 135/266 (50.75%), Query Frame = 0
Query:  212 VEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQSLSQLGKERGEGVGLLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            V + V G+ +   +M +   G C F   G M P    L +             L  +  N V F +   Y +    V    HLWG  +  VV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   LR VYLT+RP+    A+RT+L N EQ +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S V      R++ SY +
Sbjct:  188 VRILVNGKEM-PTKMELQERGRCTFITGGIMIPPEDLLFA------------DLSEEYPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESAVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GLRIVYLTARPLDWASASRTHLENAEQ-QSIKLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVTEHPVFVAGFGNRPTDIVAYEEVGIDPSLIFMLDPYSNVKAVSDPRLYESYSD 438          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: XP_008909563.1 (hypothetical protein PPTG_14772 [Phytophthora parasitica INRA-310] >ETI40594.1 hypothetical protein F443_14071 [Phytophthora parasitica P1569] >ETK80692.1 hypothetical protein L915_13714 [Phytophthora parasitica] >ETL34114.1 hypothetical protein L916_13613 [Phytophthora parasitica] >ETL87377.1 hypothetical protein L917_13420 [Phytophthora parasitica] >ETM40600.1 hypothetical protein L914_13507 [Phytophthora parasitica] >ETN05093.1 hypothetical protein PPTG_14772 [Phytophthora parasitica INRA-310] >ETO69276.1 hypothetical protein F444_14102 [Phytophthora parasitica P1976] >ETP10350.1 hypothetical protein F441_13998 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 0
Query:  265 LLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            L  D  N V F +   Y +    V A  HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N  Q +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S +      R++ SY +
Sbjct:  261 LTEDRPNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAVQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSD 471          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: ETP38512.1 (hypothetical protein F442_13915 [Phytophthora parasitica P10297])

HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 0
Query:  265 LLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            L  D  N V F +   Y +    V A  HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N  Q +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S +      R++ SY +
Sbjct:  262 LTEDRPNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAVQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSD 472          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: KUF64452.1 (Lipin protein [Phytophthora nicotianae])

HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 0
Query:  265 LLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            L  D  N V F +   Y +    V A  HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N  Q +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S +      R++ SY +
Sbjct:  230 LTEDRPNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAVQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSD 440          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: KUF97438.1 (hypothetical protein AM588_10011568 [Phytophthora nicotianae])

HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 0
Query:  265 LLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            L  D  N V F +   Y +    V A  HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N  Q +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S +      R++ SY +
Sbjct:  118 LTEDRPNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAVQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSD 328          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: XP_002906506.1 (lipin-like protein [Phytophthora infestans T30-4] >EEY65907.1 lipin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 149.8 bits (377), Expect = 2.600e-32
Identity = 97/266 (36.47%), Postives = 135/266 (50.75%), Query Frame = 0
Query:  212 VEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQSLSQLGKERGEGVGLLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            V + V GR +   +M +   G C F   G + P      +             L  D  N V F +   Y +    V A  HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N  Q +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S V      R++ SY +
Sbjct:  147 VRILVNGREM-PTKMELHERGRCTFITGGLIIPPDDLCFA------------DLTEDHPNLVRFEHFQKYTNTVRFVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAVQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEEVGMDPSLIFMLDPYSNVKAVSDPRLYESYSD 397          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: XP_002906511.1 (lipin-like protein [Phytophthora infestans T30-4] >EEY65912.1 lipin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 149.8 bits (377), Expect = 2.600e-32
Identity = 97/266 (36.47%), Postives = 135/266 (50.75%), Query Frame = 0
Query:  212 VEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQSLSQLGKERGEGVGLLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            V + V GR +   +M +   G C F   G + P      +             L  D  N V F +   Y +    V A  HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N  Q +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+++P S V      R++ SY +
Sbjct:  196 VRILVNGREM-PTKMELHERGRCTFITGGLIIPPDDLCFA------------DLTEDHPNLVRFEHFQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAVQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEEVGMDPSLIFMLDPYSNVKAVSDPRLYESYSD 446          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: GAX96896.1 (lipin-like protein [Pythium insidiosum])

HSP 1 Score: 149.8 bits (377), Expect = 2.600e-32
Identity = 91/250 (36.40%), Postives = 131/250 (52.40%), Query Frame = 0
Query:  212 VEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQSLSQLGKERGEGVGLLRDGANPVEFVYCSPYGD--LSVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNS 460
            V V V G+ +     +++  G C F   G   P            K     + L  D  N V F +     D    V++  +LWG  + +V +D+DGT+T SD+ G+I ++ LG +   H+G    F+ L +  +LR VYLT+RP+    A+RT+L N +Q   + LP GP+ T+ + LT  L  E+V K     K QV+NEI  T   AGR  E  VF+ GFGN+  D  AYE VG+DP  IF+I+P S
Sbjct:  401 VRVLVNGKELPTRMQLLE-RGRCFFTTGGLTPP------------KSDFNDIELFEDHPNLVRFEHYQRSSDSIRYVESRLYLWGPNESIVXADLDGTLTISDVEGHIRTLRLGQYDFLHKGACDFFTKLHEL-NLRIVYLTARPLDWASASRTHLENAKQ-AIHSLPPGPLITNSNGLTGALLTEVVNKNPHVFKIQVMNEIQLTLIHAGRVVEQPVFVAGFGNRPTDVLAYEQVGIDPALIFLIDPYS 635          
BLAST of NO05G01140 vs. NCBI_GenBank
Match: XP_024571849.1 (Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Plasmopara halstedii] >CEG35480.1 Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Plasmopara halstedii])

HSP 1 Score: 149.4 bits (376), Expect = 3.400e-32
Identity = 95/266 (35.71%), Postives = 135/266 (50.75%), Query Frame = 0
Query:  212 VEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQSLSQLGKERGEGVGLLRDGANPVEFVYCSPYGDL--SVKATFHLWGARDRVVVSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYLTSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKTIRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPDSIFIINPNSEV------RMFASYKE 470
            V + V GR +   +M +   G C F   G + P      +             L  +  N V F +   Y +    V    HLWG  + VVV D+DGT+T SD+ G+I ++ LG +   H G    F+ L +   +R VYLT+RP+    A+RT+L N EQ +   LP G + T+   LT  L+ E+V KT    K QVLNE+  T   AGR  E  VF+ GFGN+  D  AY+ VG+DP  IF+++P S V      R++ SY +
Sbjct:  212 VRILVNGREL-PTKMELQERGRCTFVTGGLVIPPEDLCFA------------DLTENRPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHEL-GMRIVYLTARPLDWASASRTHLENAEQ-QSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVTEHPVFVAGFGNRPTDIVAYQEVGMDPSLIFMLDPYSNVKAVSDPRLYESYSD 462          
The following BLAST results are available for this feature:
BLAST of NO05G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28252.11.100e-13951.75lipin-like protein [Nannochloropsis gaditana][more]
OWZ21690.18.900e-3336.47Lipin [Phytophthora megakarya][more]
XP_008909563.12.000e-3240.38hypothetical protein PPTG_14772 [Phytophthora para... [more]
ETP38512.12.000e-3240.38hypothetical protein F442_13915 [Phytophthora para... [more]
KUF64452.12.000e-3240.38Lipin protein [Phytophthora nicotianae][more]
KUF97438.12.000e-3240.38hypothetical protein AM588_10011568 [Phytophthora ... [more]
XP_002906506.12.600e-3236.47lipin-like protein [Phytophthora infestans T30-4] ... [more]
XP_002906511.12.600e-3236.47lipin-like protein [Phytophthora infestans T30-4] ... [more]
GAX96896.12.600e-3236.40lipin-like protein [Pythium insidiosum][more]
XP_024571849.13.400e-3235.71Protein involved in plasmid maintenance/nuclear pr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003754NSK003754Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01140.1NO05G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583764gene_2905Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g39gene2300Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01140.1NO05G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01140 ID=NO05G01140|Name=NO05G01140|organism=Nannochloropsis oceanica|type=gene|length=3241bp
CATGCTTGCCCGTGATGATCCTGTGTTGATATGTTGGGTTGGTCGAGCGT
AGAGAGCATGAGAGTACGTCCGATAGAGGCCCGGCCGTGAAGTTGATCCC
GGAGGTCGTAATCCGCATCCAAAGCTCCAGCCAAGATGCCCTCGATACCT
CTAAGCAATCACACATAAGCAGTCTGATGAGATGGAGGCGGGTTTGGTTG
GGTTGGAGAATTGGTTGTTGGGGTGAGACAGGAGCAAGTCTAATGTCCCG
CCGTCACAATTTGCTTGAACTTCTTGAAGCACCCGGGACGTGACCTCGCT
GCTTTCTTTTTAAGGCTCCGTACACACCACGACGCCTCATCCATCTTTTC
GTCCCATACAGGAAGAGCAGCCATACTATCACGCTGTCAATTACAACCCG
CCCAGTCTTTGTGCCGTTTTCATTTCACACTGCGAGGCAGTCGTATTTCT
CGTTGCACCCTCAGCCTCCCCACGTCTGCGCCAGCTCCGTCCCTTCCTCT
GCCTTGCGTTTTCTCAACTTTTCGTCCAGGTCGGGGGAGAAAGCTGAAGG
CGGCAGAGGAGGAGTAGGAGCACCAGGTGGAGGCGGCTATCCCCCCATCG
GTGGCAGTGGTCTCGTACGTCTGTGGACTGCGCGTCTCGCCGCCCGCCTC
GCTGCCCGTCGCAAGACCAAAGCCAACACCTCGGCCTCGTATTTCTCCCC
ACACCAGGTTGTGCGATTCGATCGCCTTCTCCAGCGTTTGAGAGACGCGG
CACAGGTGGGATCAGCCCCTCCTTACACTCCCATCCACCCATCACCAACC
CGTTTCCACCAACGTCTCCTCCAGCAGCAACACTGGCTCCACCGCCGTCG
CCGCGCTTTCCTCCACCGTGTTTATGGACACCGACGCGTGCGTGCATTTC
CACGAGTAATGAATGTCGCACGAGATGTCATTTTCACACAGGGAGACGGC
GGGCTGCTACACAGCACGGCGTTTGTGGTCAATTTTAAGCCAGTGGGAAC
ATTGTACAAATGGCTTGTCTCAAGACCAGCTTTAGCACCCCTGCATCTAG
GAGGGTCCACACATCCTCCTTCTCCTTCTCCTTCCCTACGACAAGCCTTA
TCCGTCCCATCAACAGCAGCGACGACGACGAATATGAGTGCCCAAAAAGG
CAGCAGCAACGTCGACAGCCCTCGTAGCTCCGCCTCCTGGGCAGGCAGCC
GCTATGGTAGTGACGACGGCAACTGCGACGACGTTTTCAATGAGGAGGAG
GACAGAAGGGAAGGGCCTGCTAACACTCTAGCCTCTTTCATTCTCTCAAG
CATCGGCTTCACCGGTAGCCCTTTCCCCCCTCCATCTTCAGCTGCAGCCC
ATGGCCGACGCCCTTCATGGCGGGGAGGGAGCGGTGGAGGGGAGGGTGAT
GGGAGGGAGATACGCTCTCCTTCTACCGGCCCTCCTTCCGTCGATCAGCA
AGAGAGGCATCAACAGCGACGACGACAACAACAAGAAGAAGAAGAGCATC
ACCAGCAGCAGCAGCACCACCACCATGCACGCCGGGAGGGGGTAGAGGTG
TACGTGCGAGGACGACTAGTGTCCGAATTAGAAATGGTGGTGGATGGAAA
TGGTGCGTGTGTCTTTGCTGACACAGGGACGATGCAACCTTCTTCCGCAG
CGCTTCAGAGCTTGTCGCAGCTGGGGAAAGAAAGGGGGGAGGGAGTGGGG
CTATTGAGAGATGGGGCGAACCCAGTGGAGTTTGTGTACTGCAGTCCGTA
CGGAGACTTGAGCGTGAAGGCCACCTTCCACCTGTGGGGGGCGAGGGACC
GCGTGGTGGTGAGCGATATTGATGgtacgtgaatttgtgtttgtgtgttg
gtgggggggggggggctaaggaaaatgggagatggtgttgatctggtgtg
tgtgcgtgagcgtgttgtgtggagatatgtacgtggaggctctgacttgt
cgttcgcgtgctgcactcgtattgcttccacttgctcacgtttccctccc
tccctccctcccttcgcagGTACCATCACCAAAAGCGACATACGTGGGTA
CATCCACAGCGTCCATCTCGGCAGCCACCACCACACCCACCGAGGCATCG
GCCGGCTGTTCTCTCACCTTGAGCAGGCCCACCACTTGCGTTTTGTGTAT
TTGACGTCACGACCTATATCCCTGCTGGACGCGACAAGGACGTACCTGGC
GAACGTCGAGCAAGATGAAGGGTACGGATTGCCTCAGGGGCCGGTTTTTA
CGTCCATGGATTCCCTGACGAGGGTTTTGTATAAAgtgggtgctatcgga
gggagggagggaggaagagagggagggagggaggatctgcattgtatatt
cacccgtttgttgcatgctcttttacccttgaaataatacaacccccccc
ccccttcgtccctcctaccctcccttattcccgctcaacagGAGCTTGTT
GAGAAGACCATCAGGTACATGAAAGCCCAAGTCTTAAACGAAATTAGCAG
CACCTTCCACAGGGCAGGCCGACCGGAAGAAGATCGTGTTTTCCTCCTGG
GATTTGGGAACAAGAGTGCCGATGGACAGGCATATGAAATGgtaagtcaa
ccctccacccctccctccttctctcccttcgtcacttgctcgttcgcttg
ccttggtttcttctttgtgtccatcaatcttacctttccgtttcaatact
tccgtccttctcccctctctcactcggggcctccctcagGTGGGTGTTGA
CCCTGACAGCATTTTCATCATCAATCCCAACAGCGAAGTTCGCATGTTCG
CTTCCTACAAAGAGTCTTCCTTCTCGTCCTTCCCTCGTCCCTTTGACTGG
CGGAGGTCGCTCTCTCCGAACGCCATGTCGTCGGAAGCGGCCAAAAGGAA
GAGGACAAGTAAGAAGAAGGGAGGGAGGGAGGGAGAAGAGGAAGGGATCG
AAGACGAGGAAGAGGAGGAGGGTGACGTGGGACCTGCGCAGGGTGTGATG
GCCATGTCGAGGGGTAGGTATGAGGGGGAGGGAGGGAAGGAGGGAGGGAA
GGATGAAGAGGGGCATACCACCACTACATTTGACTCCTATTCGGACGAGC
GTTTGCTGCGACTACTTGAGCGTCGGCTGGCGCGGGACGCAGAAGGGAAG
GATGAGCATGAAAATGTGTGATAAGAGAGAGAAATGGCTGACCGACCAAA
AACAAAGAAATGTAAATATAAGGTAGAAGAATTGCCAATCC
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protein sequence of NO05G01140.1

>NO05G01140.1-protein ID=NO05G01140.1-protein|Name=NO05G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MNVARDVIFTQGDGGLLHSTAFVVNFKPVGTLYKWLVSRPALAPLHLGGS
THPPSPSPSLRQALSVPSTAATTTNMSAQKGSSNVDSPRSSASWAGSRYG
SDDGNCDDVFNEEEDRREGPANTLASFILSSIGFTGSPFPPPSSAAAHGR
RPSWRGGSGGGEGDGREIRSPSTGPPSVDQQERHQQRRRQQQEEEEHHQQ
QQHHHHARREGVEVYVRGRLVSELEMVVDGNGACVFADTGTMQPSSAALQ
SLSQLGKERGEGVGLLRDGANPVEFVYCSPYGDLSVKATFHLWGARDRVV
VSDIDGTITKSDIRGYIHSVHLGSHHHTHRGIGRLFSHLEQAHHLRFVYL
TSRPISLLDATRTYLANVEQDEGYGLPQGPVFTSMDSLTRVLYKELVEKT
IRYMKAQVLNEISSTFHRAGRPEEDRVFLLGFGNKSADGQAYEMVGVDPD
SIFIINPNSEVRMFASYKESSFSSFPRPFDWRRSLSPNAMSSEAAKRKRT
SKKKGGREGEEEGIEDEEEEEGDVGPAQGVMAMSRGRYEGEGGKEGGKDE
EGHTTTTFDSYSDERLLRLLERRLARDAEGKDEHENV*
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Synonyms
Publications