NO05G01090, NO05G01090 (gene) Nannochloropsis oceanica

Overview
NameNO05G01090
Unique NameNO05G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1332
Alignment locationchr5:323251..324582 -

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Properties
Property NameValue
DescriptionEndoplasmic reticulum-golgi intermediate compartment protein 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:323251..324582 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO05G01090 vs. NCBI_GenBank
Match: OQS07834.1 (cysteinyl-tRNA synthetase, partial [Thraustotheca clavata])

HSP 1 Score: 280.4 bits (716), Expect = 9.600e-72
Identity = 157/418 (37.56%), Postives = 224/418 (53.59%), Query Frame = 0
Query:   12 TLYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGEEGECCNTCYSVKEAYDRRGWAFMGL-NVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADG-YGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLI 428
            +++ +L+  D +PKT ++FKVRT  GG  S+VA A M  LF++EL+Y +  + VD MYV+  R+  L  NF++ FP + CQ++S +  D  G  Q  V  ++ K RLD  GNP+  K    +G    +   L       K  ++ G                                          CGNCYGAGE GECCNTC  VK AY R+ WA   L NV QC    L++ L  +   EGC I G L + +  G  +FAP  ++  SG L   D++  TF  F+ SH IH ++ G+E+P  K+PL+++ + +  G  G +QY+LKVV T Y  LN     SNQY+V+EH   + P   +GLP V F Y+ SP+    E+ ++G   FLTS CAIVGGVF+V G+VD  ++NL+
Sbjct:  636 SVWTKLKGFDANPKTLEEFKVRTMQGGLFSLVAFALMFFLFISELQYYLTVDTVDKMYVDGQRNVNLSINFDIEFPRMPCQIVSIEHADLAGRVQLDVIDNIHKVRLDYNGNPIGEKMKESIGGALKNESELINQAPLQKLLYMDG------------------------------------------CGNCYGAGEPGECCNTCEDVKNAYIRKNWALPSLHNVVQCMNAELESILKGQ-VREGCRISGHLDVAKVEGRFYFAP-SKIFQSGYLVADDVLDSTFKVFDNSHTIHTLTFGKEYPNMKNPLNDRFKHLGLGKRGAFQYFLKVVSTDYTFLNGQEINSNQYSVTEHFLEMTPTGQKGLPRVTFAYEFSPIKFRIEQTQKGFTQFLTSFCAIVGGVFTVMGLVDSAMYNLM 1009          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: XP_012200207.1 (hypothetical protein SPRG_06092 [Saprolegnia parasitica CBS 223.65] >KDO29037.1 hypothetical protein SPRG_06092 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 278.9 bits (712), Expect = 2.800e-71
Identity = 155/418 (37.08%), Postives = 225/418 (53.83%), Query Frame = 0
Query:   12 TLYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGEEGECCNTCYSVKEAYDRRGWAFMGLN-VEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGY-GMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLI 428
            +++++++  D +PKT ++FKVRT  GG  S+ A   M  LF +EL Y +  + VD MYV+ +R+  L  NF++ FP + CQ++S +  D  G  Q  V  ++ K RLD  GN +  K    +G    +   LA   + S                                                 CGNCYGAG+ GECCNTC  VK AY RR WA   L+ V QC   +L+  L +    EGC I G L + + +G  +FAP  ++  SG L   D++  TF  F+ SH IH ++ G+E+P  K+PL+ +V+ + +G  G YQY+LKVV T Y  LN     SNQY+ +EH   + P   +GLP + F Y+ SP+    E+ ++GL+PFLTSVCAIVGGVF+V G+VD  ++N+I
Sbjct:    3 SVWQKIKSFDANPKTLEEFKVRTTQGGLFSLCAFILMAYLFFSELAYHLAVDTVDKMYVDGTRNVNLSINFDIEFPRMPCQIVSIEHADLAGRVQLDVIDNIHKMRLDLHGNTIGEKIKETIGGALVNESQLAVQTDGS------------------------------------------------MCGNCYGAGDPGECCNTCEDVKNAYVRRNWALPSLHTVVQCMNADLEAIL-KGDIKEGCRITGHLDVAKVAGKFYFAP-SKIFQSGYLVADDVLDSTFKVFDNSHTIHALTFGQEYPNMKNPLNARVKHLPEGMRGAYQYFLKVVSTDYSFLNGNEIKSNQYSATEHFLEMTPTGQKGLPRITFAYEFSPIKFRIEQTQKGLVPFLTSVCAIVGGVFTVMGLVDAAMYNVI 370          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: PIK38505.1 (hypothetical protein BSL78_24662, partial [Apostichopus japonicus])

HSP 1 Score: 278.9 bits (712), Expect = 2.800e-71
Identity = 153/420 (36.43%), Postives = 240/420 (57.14%), Query Frame = 0
Query:   15 ERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKR----RKCGNCYGAGE-EGECCNTCYSVKEAYDRRGWAFMGL-NVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHI---NPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 426
            +RLR+ D +PKT +DF+V+T  G A ++V+   M  LF++EL + ++KE++  +YV+++R+ +L  N +M FP + C  LS DAMD  G  Q  VE+++FK RLD  G         K+ DT  +  +  +   D  A                                     ++K IGK      +C +CYGA   E +CCNTC  V+EAY ++GWAF    N+EQC++E   + L  +   EGCNI+G + + + +GN HFAPG+  +     +V DL  F   +FN+SH I+ +S G E+PG ++PL N       G  MYQY++K+VPT Y   +++   SNQY+V++H + +   +P  ++GLPGV+  Y+ SP+ V+F E+ R  + FLT VCAIVGG+F+V G++D ++++
Sbjct:   41 DRLRQFDAYPKTLEDFRVKTFGGAAVTIVSGLFMFILFVSELNFYLSKEVIPELYVDNTRNEKLKINIDMIFPRMPCAFLSVDAMDISGEHQLDVEANLFKQRLDQNG--------QKVEDTAEETQIGDETVGDEDA-------------------------------------IQKAIGKEELDPNRCESCYGAETGESKCCNTCEEVREAYRKKGWAFRNSDNIEQCKREGWGDKLNAQ-KGEGCNIYGYMEVNKVAGNFHFAPGKSFQQHHT-HVHDLQPFAGTQFNLSHTINQLSFGMEYPGMENPLDNLKVEDIKGSAMYQYFVKIVPTTYMKSDESIIRSNQYSVTKHQKRVSTSSPLGDQGLPGVFILYELSPLMVKFTEKSRSFMHFLTGVCAIVGGIFTVAGLIDSMIYH 413          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: XP_022105808.1 (endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Acanthaster planci])

HSP 1 Score: 278.5 bits (711), Expect = 3.600e-71
Identity = 152/418 (36.36%), Postives = 235/418 (56.22%), Query Frame = 0
Query:   13 LYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGA-GEEGECCNTCYSVKEAYDRRGWAF-MGLNVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHI---NPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 426
            ++ RLR+ D +PKT +DF+V+T  G A ++V+   M  LFL+EL Y + KE++  +YV+++R  +L  N ++ FP + C  LS DAMD  G  Q  V+ ++++ RLDA GNP+  K            + +   EED  A                                K+ +  K+ +   R C +CYGA  +E +CCN+C  V+EAY R+GWAF M   + QC +E   + +  +   EGC + G L + + +GN HFAPG+  +    ++V DL  F   KFN+SH I  +S G E+PG  +PL   + +   G  MYQY++KVVPT Y  LN  +T +NQY+V++H + +   +    +GLPGV+  Y+ SP+ V+F E+ R  + FLT VCAI+GGVF+V G++D  +++
Sbjct:    6 VFHRLRQFDAYPKTLEDFRVKTFGGAAVTIVSAILMTVLFLSELNYYLTKEVIPELYVDNTRGEKLRINMDIIFPKMPCVFLSLDAMDVSGEHQLDVDLNIYRKRLDAKGNPIDEKE-----------ETIKLGEEDKDA-------------------------------AKLIKAKKEELDPNR-CESCYGAESKELQCCNSCEDVREAYRRKGWAFNMATEIVQCNREGWSDKIDAQ-KGEGCQLFGYLEVNKVAGNFHFAPGKSFQQH-HVHVHDLQPFIGDKFNMSHHIQQLSFGVEYPGMDNPLDRTLVTDRRGSTMYQYFIKVVPTTYTKLNGQTTRTNQYSVTKHEKQVSILSISGEQGLPGVFVLYELSPLMVKFTEKHRSFMHFLTGVCAIIGGVFTVAGLIDSFIYH 378          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: XP_019641603.1 (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Branchiostoma belcheri])

HSP 1 Score: 277.7 bits (709), Expect = 6.200e-71
Identity = 149/414 (35.99%), Postives = 237/414 (57.25%), Query Frame = 0
Query:   16 RLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRR-KCGNCYGA-GEEGECCNTCYSVKEAYDRRGWAFMGL-NVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGS-NRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 426
            +LRR D +PKT DDF+V+T  G A ++++   M+ LF++EL+Y +  E+ + ++V++SR  ++  N ++ FP V C  LS DAMD  G +Q  V+ ++FK R+D  GN L       LG              D   +F+Q                                 +KK+  K    C +CYGA  ++  CCNTC  V+EAY R+GWAF    ++EQC++E     L ++  +EGC ++G L + + +GN HFAPG+  +    ++V DL  F   KFN+SH ++H+S G + PG  +PL   V +   G  MYQY++K+VPT+YK ++     +NQ++V++H + +   S  +GLPGV+  Y+ SP+ V+F E++R  + FLT VCAIVGGVF+V G++D ++++
Sbjct:    9 KLRRFDAYPKTLDDFRVKTFGGAAVTIISGFFMILLFVSELQYYLTLEVTEELFVDTSRGEKMRINIDIMFPKVPCAYLSIDAMDIAGEQQIDVDHNLFKRRMDLQGNVLDEPEKEDLG--------------DPSDEFIQA--------------------------------IKKLENKTADMCESCYGAETDDLRCCNTCEDVREAYRRKGWAFNNPDSIEQCRREGWSEKLKQQ-KNEGCQVYGYLEVNKVAGNFHFAPGKSFQQH-HVHVHDLQPFGGEKFNLSHHVNHLSFGTDIPGRVNPLDGHVIAAKQGSMMYQYFVKIVPTIYKKISGQEVRTNQFSVTKHQKQVTASSGEQGLPGVFVLYELSPMMVQFTEKQRSFMHFLTGVCAIVGGVFTVAGLIDSLIYH 374          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: XP_003579883.1 (endoplasmic reticulum-Golgi intermediate compartment protein 3 [Brachypodium distachyon] >KQJ82928.1 hypothetical protein BRADI_5g12110v3 [Brachypodium distachyon] >KQJ82929.1 hypothetical protein BRADI_5g12110v3 [Brachypodium distachyon] >KQJ82932.1 hypothetical protein BRADI_5g12110v3 [Brachypodium distachyon] >KQJ82934.1 hypothetical protein BRADI_5g12110v3 [Brachypodium distachyon] >PNT61210.1 hypothetical protein BRADI_5g12110v3 [Brachypodium distachyon] >PNT61211.1 hypothetical protein BRADI_5g12110v3 [Brachypodium distachyon])

HSP 1 Score: 276.9 bits (707), Expect = 1.100e-70
Identity = 153/415 (36.87%), Postives = 229/415 (55.18%), Query Frame = 0
Query:   13 LYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGEEGE-CCNTCYSVKEAYDRRGWAFMGL-NVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 426
            L  +LR LD +PK  +DF  RT  GG  ++ +   M+ LF++EL+  ++      + V++SR  +L  NF++TFP++ C ++S D MD  G +   V+  VFK R+DA GN ++ K            D +   + +   Q   G                                  ++      CG+CYGA E GE CCN+C  V+EAY ++GW      +++QC++E     + +E   EGCNI+G + + + +GN HFAPG+  + S  ++V DL+ F    FN+SH+I+ +S GE FPG  +PL          YGMYQY++KVVPTVY H+N+   +SNQ++V+EH R       + LPGV+FFYD SP+ V F ER    L FLT+VCAIVGGVF+V G++D  V++
Sbjct:    4 LMSKLRNLDAYPKVNEDFYSRTLSGGVITLASSFVMLLLFVSELRLYLHAVTETTLRVDTSRGEKLRINFDITFPALQCSIISIDVMDISGQEHLDVKHDVFKQRIDANGNVIATKQ-----------DAVGGMKVEKPLQMHGG----------------------------------RLEHNETYCGSCYGAEEPGEQCCNSCEDVREAYRKKGWGVSNPDSIDQCKREGFLQTIKDE-EGEGCNIYGFVEINKVAGNFHFAPGKSFQQSN-VHVHDLLPFQKDSFNVSHKINKLSFGEPFPGVVNPLDGAHWFQHSPYGMYQYFVKVVPTVYSHINEQIILSNQFSVTEHARSSESVRMQALPGVFFFYDLSPIKVTFTERHVSFLHFLTNVCAIVGGVFTVSGIIDSFVYH 371          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: ETL87684.1 (hypothetical protein L917_13171 [Phytophthora parasitica])

HSP 1 Score: 276.9 bits (707), Expect = 1.100e-70
Identity = 153/428 (35.75%), Postives = 235/428 (54.91%), Query Frame = 0
Query:    6 ISPKELTLYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFT-DVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGEEGECCNTCYSVKEAYDRRGWAFMGLN-VEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVAD--GYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLIQR 430
            ++ K  +   +L+ LD +PKT ++FKVRT  GG  S++A AC+  L ++EL + +  + VD M V+  R+T +  NF++ FP + C +++ ++ D  GN Q  +  ++ K  LD  G  L+      +G T T + D+  K E+ +                                                 CG+CY AGE GECCNTC SVK AY R+ W    L+ + QCQ+  ++  L  E  +EGC I GSL++++ +G ++FAP +  R SG L+  DLV  TF  F+ SH I  +S GE +P  K+PL N+++ + D    G +QY+LKVVPT Y  L+ +  ++NQ++ +EH R + P S++GLP V F Y  SP+    E+ R G L FLTSVCAIVGGVF++ G++D +   L+ +
Sbjct:    1 MTSKSSSWVSKLKGLDAYPKTIEEFKVRTLQGGLFSLLAFACIALLLVSELSFYLTTDTVDKMMVDGGRNTLVSINFDLEFPRMPCSVVAVESADMAGNAQHDIVHNIEKIPLDHNGQALAEGMRDVIGGTLTNNTDLHGKTEKPA-------------------------------------------------CGSCYSAGEPGECCNTCESVKAAYARKSWMMPSLHTIAQCQELEVEKVLRGE-VNEGCRIKGSLVVSKVAGRLYFAPSKFFR-SGYLSAQDLVDATFKVFDTSHTIRSLSFGELYPDMKNPLDNRLKELPDESTRGSFQYFLKVVPTEYTFLSASRIITNQFSATEHFRQLTPVSDKGLPMVSFGYTFSPIMFRIEQYRVGFLQFLTSVCAIVGGVFTILGIMDSLAFGLLNK 377          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: ETM40916.1 (hypothetical protein L914_13262 [Phytophthora parasitica] >ETO69602.1 hypothetical protein F444_13864 [Phytophthora parasitica P1976])

HSP 1 Score: 276.9 bits (707), Expect = 1.100e-70
Identity = 154/427 (36.07%), Postives = 233/427 (54.57%), Query Frame = 0
Query:    6 ISPKELTLYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGEEGECCNTCYSVKEAYDRRGWAFMGLN-VEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVAD--GYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLIQR 430
            ++ K  +   +L+ LD +PKT ++FKVRT  GG  S++A AC+  L ++EL + +  + VD M V+  R+T +  NF++ FP + C +++ ++ D  GN Q  +  ++ K  LD  G  L+      +G T T+   L  H E  K                                                CG+CY AGE GECCNTC SVK AY R+ W    L+ + QCQ+  ++  L  E  +EGC I GSL++++ +G ++FAP +  R SG L+  DLV  TF  F+ SH I  +S GE +P  K+PL N+++ + D    G +QY+LKVVPT Y  L+ +  ++NQ++ +EH R + P S++GLP V F Y  SP+    E+ R G L FLTSVCAIVGGVF++ G++D +   L+ +
Sbjct:    1 MTSKSSSWVSKLKGLDAYPKTIEEFKVRTLQGGLFSLLAFACIALLLVSELSFYLTTDTVDKMMVDGGRNTLVSINFDLEFPRMPCSVVAVESADMAGNAQHDIVHNIEKIPLDHNGQALAEGMRDVIGGTLTNNTDL--HGETEKP----------------------------------------------ACGSCYSAGEPGECCNTCESVKAAYARKSWMMPSLHTIAQCQELEIEKVLRGE-VNEGCRIKGSLVVSKVAGRLYFAPSKFFR-SGYLSAQDLVDATFKVFDTSHTIRSLSFGELYPDMKNPLDNRLKELPDESTRGSFQYFLKVVPTEYTFLSASRIITNQFSATEHFRQLTPVSDKGLPMVSFGYTFSPIMFRIEQYRVGFLQFLTSVCAIVGGVFTILGIMDSLAFGLLNK 377          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: NP_001148795.1 (uncharacterized protein LOC100282412 [Zea mays] >ACF82571.1 unknown [Zea mays] >ACG32935.1 serologically defined breast cancer antigen NY-BR-84 [Zea mays] >ONM16988.1 Endoplasmic reticulum vesicle transporter protein [Zea mays])

HSP 1 Score: 276.9 bits (707), Expect = 1.100e-70
Identity = 162/429 (37.76%), Postives = 242/429 (56.41%), Query Frame = 0
Query:   13 LYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGE-EGECCNTCYSVKEAYDRRGWAFMGLN-VEQCQQEN-LKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLIQRGVGGGMKKG 439
            L  +LR LD +PK  +DF  RT  GG  ++V+ A M+ LF++EL+  ++      + V++SR   L  NF++TFP++ C ++S DAMD  G +   V+  VFK R+DA GN ++           T  DV+   + ++  Q   G                                  ++      CG+CYGA E + +CCNTC  V+EAY ++GW     + ++QC++E  L++   EEG  EGCNI+G + + + +GN HFAPG+  + S  ++V DL+ F    FN+SH+I+ +S GE FPG  +PL          YGMYQY++KVVPTVY  +N+   +SNQ++V+EH R    G  + LPGV+FFYD SP+ V F E+    L FLT+VCAIVGGVF+V G++D  V++  QR +   M+ G
Sbjct:    4 LLSKLRSLDAYPKVNEDFYSRTLSGGIITLVSSAVMLLLFVSELRLYLHAVTETTLRVDTSRGETLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDVFKQRIDAHGNVIA-----------TRQDVVGGMKMEAPLQHHGG----------------------------------RLEHNETYCGSCYGAQESDDQCCNTCEDVREAYRKKGWGVSNPDLLDQCKREGFLQSIKDEEG--EGCNIYGFIEVNKVAGNFHFAPGKSFQQSN-VHVHDLLPFQKDSFNVSHKINRLSFGEYFPGVVNPLDGANWVQHSSYGMYQYFIKVVPTVYTDINEHIILSNQFSVTEHFRSGESGRMQALPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVFTVSGIIDSFVYH-SQRAIKKKMEIG 383          
BLAST of NO05G01090 vs. NCBI_GenBank
Match: XP_020154966.1 (endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 276.6 bits (706), Expect = 1.400e-70
Identity = 155/415 (37.35%), Postives = 229/415 (55.18%), Query Frame = 0
Query:   13 LYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVCLFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMDPLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDSKAQFVQGEEXXXXXXXXXXXXXXXXXXXXXXXXXKVWRKMKKVIGKRRKCGNCYGAGEEGE-CCNTCYSVKEAYDRRGWAFMGL-NVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNISHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHN 426
            L  +LR LD +PK  +DF  RT  GGA ++ +   M+ LF++EL+  ++      + V++SR  +L  NF++TFP++ C ++S D MD  G +   V+  VFK R+DA GN ++ K            D +   + +   Q   G                                  ++      CG+CYGA E  E CCN+C  V+EAY ++GW      +++QC+ E     + +E   EGCNI+G L + + +GN HFAPG+  + S  ++V DL+ F    FN+SH+I+ +S GE FPG  +PL          YGM QY++KVVPTVY HLN+   +SNQ++V+EH R  + G  + LPGV+FFYD SP+ V F ER    L FLT+VCAIVGGVF+V G++D  V++
Sbjct:    4 LLSKLRSLDAYPKVNEDFYSRTLSGGAITLASSFIMLLLFVSELRLYLHAVTETTLRVDTSRGEKLRINFDITFPALQCSIISVDVMDISGQEHLDVKHDVFKQRIDAHGNVIATKQ-----------DAVGGMKVEKPLQHHGG----------------------------------RLEHNETYCGSCYGAQESPEQCCNSCEDVREAYRKKGWGVSNPDSIDQCKSEGFLQTIKDE-EGEGCNIYGILEINKVAGNFHFAPGKSFQQSN-VHVHDLLPFQKDSFNLSHKINKLSFGEPFPGVINPLDGAQWIQHSSYGMAQYFVKVVPTVYSHLNEQIILSNQFSVTEHYRSGDSGRVQALPGVFFFYDLSPIKVTFTERHVSFLHFLTNVCAIVGGVFTVSGIIDSFVYH 371          
The following BLAST results are available for this feature:
BLAST of NO05G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQS07834.19.600e-7237.56cysteinyl-tRNA synthetase, partial [Thraustotheca ... [more]
XP_012200207.12.800e-7137.08hypothetical protein SPRG_06092 [Saprolegnia paras... [more]
PIK38505.12.800e-7136.43hypothetical protein BSL78_24662, partial [Apostic... [more]
XP_022105808.13.600e-7136.36endoplasmic reticulum-Golgi intermediate compartme... [more]
XP_019641603.16.200e-7135.99PREDICTED: endoplasmic reticulum-Golgi intermediat... [more]
XP_003579883.11.100e-7036.87endoplasmic reticulum-Golgi intermediate compartme... [more]
ETL87684.11.100e-7035.75hypothetical protein L917_13171 [Phytophthora para... [more]
ETM40916.11.100e-7036.07hypothetical protein L914_13262 [Phytophthora para... [more]
NP_001148795.11.100e-7037.76uncharacterized protein LOC100282412 [Zea mays] >A... [more]
XP_020154966.11.400e-7037.35endoplasmic reticulum-Golgi intermediate compartme... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003759NSK003759Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01090.1NO05G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553321gene_2900Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g34gene2295Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01090.1NO05G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01090 ID=NO05G01090|Name=NO05G01090|organism=Nannochloropsis oceanica|type=gene|length=1332bp
ATGATCTCGCCCAACATCTCACCCAAGGAATTGACGCTGTACGAGCGATT
GCGGCGACTAGACTTCCACCCCAAGACGAAGGATGATTTCAAGGTCCGCA
CGGCTTATGGCGGGGCGACGTCCGTCGTGGCCTTGGCCTGCATGGTCTGC
TTGTTTTTAACCGAGCTCAAGTACTCGATGAATAAGGAGATTGTCGACCA
CATGTATGTTAATTCCTCGCGGGACACCCGACTGCTATTCAATTTCAACA
TGACCTTTCCCTCGGTATCGTGTCAGTTGTTGAGCGCCGATGCGATGGAC
CCGTTGGGGAATAAACAGGAGGGGGTGGAGAGCCATGTGTTCAAGACGCG
ATTAGATGCGGCAGGCAATCCACTCTCGGCAAAAACGTGGCATAAGCTGG
GGGATACCTTTACGGATGTGGATGTGTTGGCGAAGCACGAGGAGGACAGT
AAAGCGCAGTTTGTGCAGGGGGAGGAAGAGATGGAGCAATGGGTGGAAGT
AGACGAGGACGAGGATGGAGAGGAGAGGGAGGTAGAAGATGAAGACGGGC
AAAAAGTGTGGCGGAAGATGAAAAAGGTGATTGGGAAGCGACGGAAGTGT
GGGAACTGCTACGGGGCCGGCGAGGAGGGAGAGTGCTGCAACACTTGTTA
CAGCGTCAAGGAGGCGTACGACCGAAGGGGCTGGGCGTTCATGGGCCTGA
ATGTCGAGCAATGCCAGCAAGAAAACCTGAAGAATCCTCTGGGAGAAGAA
GGGGCAGACGAAGGCTGCAACATCCATGGCTCGTTGCTGTTGACACAGGA
GAGCGGGAACGTCCACTTTGCCCCGGGCGAGCAGCTCCGGCATTCGGGCG
CCTTAAATGTGGCTGATCTGGTGATGTTCACGTTCCTTAAATTCAACATC
TCACACGAAATCCACCACATGTCGTTGGGGGAGGAATTCCCAGGTTTTAA
ATCGCCGCTGAGTAATCAGGTGCGGAGCGTGGCGGATGGGTATGGAATGT
ATCAGTATTACCTGAAGGTAGTGCCGACCGTGTATAAGCACTTGAACAAG
GCGTCCACAGTCTCGAATCAATACGCGGTCTCCGAGCACATTCGTCATAT
CAACCCTGGGAGTAATCGGGGGCTACCGGGCGTGTGGTTCTTTTATGACA
CGTCTCCGGTGCATGTTGAGTTTGAGGAGAGGAGGAGAGGACTGTTACCG
TTCTTGACGAGTGTGTGCGCGATTGTTGGGGGCGTATTCTCAGTCTTCGG
GGTAGTCGATGGCGTAGTGCATAACTTGATTCAAAGGGGTGTAGGAGGCG
GGATGAAGAAAGGGGGGGCGCCTGGGAGTTAG
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protein sequence of NO05G01090.1

>NO05G01090.1-protein ID=NO05G01090.1-protein|Name=NO05G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MISPNISPKELTLYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVC
LFLTELKYSMNKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMD
PLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDS
KAQFVQGEEEMEQWVEVDEDEDGEEREVEDEDGQKVWRKMKKVIGKRRKC
GNCYGAGEEGECCNTCYSVKEAYDRRGWAFMGLNVEQCQQENLKNPLGEE
GADEGCNIHGSLLLTQESGNVHFAPGEQLRHSGALNVADLVMFTFLKFNI
SHEIHHMSLGEEFPGFKSPLSNQVRSVADGYGMYQYYLKVVPTVYKHLNK
ASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFEERRRGLLP
FLTSVCAIVGGVFSVFGVVDGVVHNLIQRGVGGGMKKGGAPGS*
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Synonyms
Publications