NO05G00700, NO05G00700 (gene) Nannochloropsis oceanica

Overview
NameNO05G00700
Unique NameNO05G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2024
Alignment locationchr5:229529..231552 -

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Properties
Property NameValue
DescriptionHd phosphohydrolase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:229529..231552 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009218HD_phosphohydro
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO05G00700 vs. NCBI_GenBank
Match: EWM28314.1 (hd phosphohydrolase family protein [Nannochloropsis gaditana])

HSP 1 Score: 215.3 bits (547), Expect = 2.200e-52
Identity = 108/178 (60.67%), Postives = 132/178 (74.16%), Query Frame = 0
Query:   13 IKVDTALHVTFSSTMEVGLYVRWRRALDGDDA-RTTGASAPEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQPRQVYM 190
            ++ DT+L + F+S++EV LYVRWRRAL GD++      S+  E   +RWWQEI++ YT   RRYHGLTHLQQMFGEMDRH GRL RPD VALA+FFHD+        NEE SAERF+ FAQEATR+  +DI  VH YILATKTH+ +  P   + D+DL LFLDIDMSILGQPR++YM
Sbjct:    9 VQTDTSLDIKFASSLEVALYVRWRRALSGDESIPEAEPSSTLEKARNRWWQEIIREYTKLERRYHGLTHLQQMFGEMDRHVGRLTRPDRVALAVFFHDI--------NEEKSAERFNAFAQEATRMSKEDIGVVHAYILATKTHQMSQSP---EVDDDLALFLDIDMSILGQPREIYM 175          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: EKC19616.1 (hypothetical protein CGI_10008098 [Crassostrea gigas])

HSP 1 Score: 119.4 bits (298), Expect = 1.700e-23
Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 0
Query:   59 RWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQPRQVY 189
            +WW  I   Y+   R YH L HL++MF   D++  +L +P+LV LAIFFHD+IYDP ++ NEE+SAE F  F++EA  L       V  +IL TK+H      ++++ D+DL  FLD+DM++LG+P + Y
Sbjct:   24 KWWGVIEGRYSEKQRHYHTLRHLEEMFQHFDKYFKKLNQPELVVLAIFFHDIIYDPKANDNEEESAEVFSQFSKEAGNLEADKTDAVMKWILQTKSHS-----VKENSDKDLQFFLDMDMAVLGRPSEDY 148          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: XP_011455307.1 (PREDICTED: uncharacterized protein LOC105347796 [Crassostrea gigas] >XP_011455308.1 PREDICTED: uncharacterized protein LOC105347796 [Crassostrea gigas] >XP_019930694.1 PREDICTED: uncharacterized protein LOC105347796 [Crassostrea gigas] >XP_019930695.1 PREDICTED: uncharacterized protein LOC105347796 [Crassostrea gigas] >XP_019930696.1 PREDICTED: uncharacterized protein LOC105347796 [Crassostrea gigas])

HSP 1 Score: 119.4 bits (298), Expect = 1.700e-23
Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 0
Query:   59 RWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQPRQVY 189
            +WW  I   Y+   R YH L HL++MF   D++  +L +P+LV LAIFFHD+IYDP ++ NEE+SAE F  F++EA  L       V  +IL TK+H      ++++ D+DL  FLD+DM++LG+P + Y
Sbjct:   24 KWWGVIEGRYSEKQRHYHTLRHLEEMFQHFDKYFKKLNQPELVVLAIFFHDIIYDPKANDNEEESAEVFSQFSKEAGNLEADKTDAVMKWILQTKSHS-----VKENSDKDLQFFLDMDMAVLGRPSEDY 148          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: XP_019645716.1 (PREDICTED: uncharacterized protein LOC109486334 isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 117.1 bits (292), Expect = 8.300e-23
Identity = 68/168 (40.48%), Postives = 86/168 (51.19%), Query Frame = 0
Query:   24 SSTMEVGLYVRWRRALDGDDARTTGASAPEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIED---DKDEDLLLFLDIDMSILGQPRQVY 189
            S+T+E  LY RW      D  RTT A          WW+ +   Y  P R YH L+H+  MF   DRH  ++   + VA AIFFHD++YD  +S NE  SAE FH FA E  + P   I++    I+ TK H       +D    KDE    FLD DMS+LG P Q Y
Sbjct:   28 SATVEAPLYERWTELCSRDRIRTTEAR-------QDWWRVVKARYCEPWRFYHNLSHIYSMFQHFDRHQDKIQNRNAVAWAIFFHDVVYDAKASDNEARSAEMFHHFATENLQKPPDCIRETERLIMLTKEHVTEEHRHKDRYGTKDEH--YFLDFDMSVLGWPEQDY 186          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: XP_002587279.1 (hypothetical protein BRAFLDRAFT_129130 [Branchiostoma floridae] >EEN43290.1 hypothetical protein BRAFLDRAFT_129130 [Branchiostoma floridae])

HSP 1 Score: 112.5 bits (280), Expect = 2.100e-21
Identity = 64/164 (39.02%), Postives = 82/164 (50.00%), Query Frame = 0
Query:   24 SSTMEVGLYVRWRRALDGDDARTTGASAPEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDD-KDEDLLLFLDIDMSILGQPRQ 187
            + T+E  LY RW      D  RT  AS         WW+ +   Y  P R YH L+H+  MF   D H  ++   + VA AIFFHD++YD  +S NE  SAE FH FA E  + P   I++    IL TK H       +D    +D   FLD DMS+LG P Q
Sbjct:   48 TGTVEAPLYERWTELCSRDMVRTAEAS-------QAWWRVVKDRYCEPWRFYHNLSHVHSMFLHFDNHRHKIQNQNAVAWAIFFHDIVYDAKASDNEARSAEMFHHFATENLQKPPDCIRETERLILLTKEHVTKEHRNKDRYGTKDKHYFLDFDMSVLGWPEQ 204          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: XP_021373452.1 (uncharacterized protein LOC110463289 [Mizuhopecten yessoensis] >OWF40816.1 hypothetical protein KP79_PYT09220 [Mizuhopecten yessoensis])

HSP 1 Score: 111.7 bits (278), Expect = 3.500e-21
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 0
Query:   54 EAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRL--ARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQP 185
            E V +RWW  +   Y++P R YH L HL++MF   D   G +    P LV LA+FFHD+IY+P    NEE SA++F  +A E   L   D KKV  +IL TK+H      ++ D   D   FLDIDM++LG+P
Sbjct:   22 EVVAERWWGVVRDLYSDPARHYHTLQHLREMFQHFDFAGGHITFCYPRLVTLAVFFHDIIYEPKKPDNEERSADKFEEYAAEVNVLSDVDCKKVKDWILLTKSH----TALKGDNSGDEHYFLDIDMAVLGRP 150          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: CBN78652.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 105.1 bits (261), Expect = 3.300e-19
Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 0
Query:   53 EEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQPRQVYM 190
            + A  + W + +  GY+   R YH   H+  M  + DR    L  P LV LAIFFHD++YDP S +NEEDS   F  F+ EA  L   D   V  YI+ATK H      +    D+DL  F+D+DM+++G+ R  Y+
Sbjct:   21 DNAPSEEWGETLRDGYSEEGRHYHTFEHVADMLEQADRDFPNLRHPRLVQLAIFFHDVVYDPKSGSNEEDSEALFRKFS-EAVGLSASDSTTVSDYIIATKRHS-----VSGSDDQDLRAFIDLDMAVVGRERSGYL 151          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: XP_003290525.1 (hypothetical protein DICPUDRAFT_92502 [Dictyostelium purpureum] >EGC32959.1 hypothetical protein DICPUDRAFT_92502 [Dictyostelium purpureum])

HSP 1 Score: 104.4 bits (259), Expect = 5.600e-19
Identity = 52/140 (37.14%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   49 ASAPEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQPRQVY 189
            ++ P+  V D+WW  I   YT   R YH LTH+ ++    ++ + +L  P+ V  AI+FHD++YDP    NE+ SA+ F  F+ +  +L  +   +V+ YI+ATK H      ++ + D DL  FLD D+SILG  R+ Y
Sbjct:   21 SNLPKNEVSDKWWNIINTRYTEKQRYYHTLTHINELLKLEEQFSSKLKSPETVQWAIWFHDIVYDPTKHDNEDQSAQLFKEFSND-LKLSNELTTRVYNYIMATKNH----TSVQTNGDSDLDYFLDFDLSILGTDRETY 155          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: WP_006796345.1 (hypothetical protein [Flavobacteria bacterium BBFL7] >EAS20575.1 conserved hypothetical protein [Flavobacteria bacterium BBFL7])

HSP 1 Score: 100.9 bits (250), Expect = 6.200e-18
Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   47 TGASAPEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQP 185
            T +   E   +D  W E+   YT   R YH LTHL+++FG  D +   L +PDLVA AIF+HD+IY   +  NEEDSA++     Q  +  P +D++++ ++ILATK+H            +D    +D D++ILG P
Sbjct:   11 TSSYTNENQYIDILWNELESHYTESHRTYHNLTHLEELFGYFDIYKKELEKPDLVAFAIFYHDIIYGVWNKKNEEDSAKKALKVLQNLSLSP-EDLEEIESHILATKSHTAI--------SKDTKWMIDFDLAILGSP 139          
BLAST of NO05G00700 vs. NCBI_GenBank
Match: WP_042294185.1 (hypothetical protein [Nonlabens ulvanivorans])

HSP 1 Score: 100.5 bits (249), Expect = 8.100e-18
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 0
Query:   47 TGASAPEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDLVALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYILATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQP 185
            T +   E   ++  W E+   YT   R YH LTHL+++FG  D +   L +PDLVA AIF+HD+IY   +  NEEDSAE+  L     T L + D+  + ++ILATKTH            +D    +D D++ILG P
Sbjct:   11 TSSYINENESIELLWNELESHYTESHRTYHNLTHLEELFGYYDTYKKELEKPDLVAFAIFYHDIIYGIWNKKNEEDSAEK-ALNVLNKTALSVNDLTTIESHILATKTHNAFL--------KDTQWMIDFDLAILGTP 139          
The following BLAST results are available for this feature:
BLAST of NO05G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28314.12.200e-5260.67hd phosphohydrolase family protein [Nannochloropsi... [more]
EKC19616.11.700e-2343.85hypothetical protein CGI_10008098 [Crassostrea gig... [more]
XP_011455307.11.700e-2343.85PREDICTED: uncharacterized protein LOC105347796 [C... [more]
XP_019645716.18.300e-2340.48PREDICTED: uncharacterized protein LOC109486334 is... [more]
XP_002587279.12.100e-2139.02hypothetical protein BRAFLDRAFT_129130 [Branchiost... [more]
XP_021373452.13.500e-2143.61uncharacterized protein LOC110463289 [Mizuhopecten... [more]
CBN78652.13.300e-1939.42conserved unknown protein [Ectocarpus siliculosus][more]
XP_003290525.15.600e-1937.14hypothetical protein DICPUDRAFT_92502 [Dictyosteli... [more]
WP_006796345.16.200e-1837.68hypothetical protein [Flavobacteria bacterium BBFL... [more]
WP_042294185.18.100e-1839.13hypothetical protein [Nonlabens ulvanivorans][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003805NSK003805Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00700.1NO05G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583605gene_2862Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100348g2gene2262Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00700.1NO05G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00700 ID=NO05G00700|Name=NO05G00700|organism=Nannochloropsis oceanica|type=gene|length=2024bp
CAACCATTCACTCCAAACTTCATCGCAGAGATGGCCGCCGCCGCGCTTCG
AGAAGCTTCGCCTGGAATCAAGGTGGACACAGCGCTCCATGTCACGTTCT
CGTCCACTATGGAGGTGGGCTTGTATGTGCGGTGGAGGCGTGCATTGGAT
GGAGACGACGCCCGGACGACGGGAGCATCCGCACCCGAAGAGGCGGTCCT
CGACCGGTGGTGGCAAGAGATTGTACAGGGGTACACGAATCCGGTGCGAC
Ggtgagtgtggagaggcaatagataacgtgcgacacaaaattatgccact
ctcaatcgtccccttcctcagtccttgccatccacacacttcgcctctgt
gtctccaatagATACCACGGCCTGACCCACCTACAGCAAATGTTTGGGGA
AATGGACCGGCACGCCGGCAGACTGGCCCGCCCTGACCTGGTGGCACTCG
CCATCTTTTTCCACGAgtacgtacatgcgtaggtagatatgttcgagagc
tgcacggggaggtaatgacccttcatagaccactaactcctcttctttcc
acctctacgaacccatcagTCTGATTTATGACCCTGGCAGCAGCACGAAT
GAGGAGGACAGTGCGGAGCGTTTTCATCTTTTTGCGCAGGAGGCCACAAG
ATTAgtacgtttgggcagacactaagaatggggggctacggagaatggag
aagcaacgcatgcacacctttaagatgtttcgccctcccttcttctccgc
cttttcaccactcacagCCGATGAAAGACATCAAAAAAGTTCACACCTAT
ATCCTGGCAACCAAAACCCACAAGCCCGCCCCCCCTCCCATCGAGGACGA
CAAGGACGAGGACCTCCTCCTCTTCCTCGATATCGATATGAGCATTCTCG
GGCAGCCCCGACAGGTGTACATGATgtaagaaggaaaggagggagggcag
gaggataattagacaaaaaacgacggtcatgatgttttaattcttctatt
tctgatagTAAATTAGCCCCTTCTTTTCCTCCCCTAAAAGAGGAGGGAGG
ACGGTGCCTGCATGATTTCAGCATAGCGCAACCTTCGCCGGTAGCTCCTT
CTGAACCGTCGTTTGAGCACGAAATAGTTATTATAGCGAgtaattggtta
aaaggggggggggggggagagggagggagggaagggaaggatggaaggag
ggaatgaagggtctcaagttgaatttcatttcctaagtggctacgagcgg
tggaggaagtaggtttgacgcctcacccctccttctttttccctcttttt
gcagtattactgtaccttgtctttcctggtgtctccctactttgtttcta
agcttcctacttgacgtgctcggctctccttctcctcccctcctttcctc
ccttcctcccccttttgaaagGTACGCCGGTGCCATTCGCTCCGAGTACA
AACATGTACCTCGCCTCACCTACCTCACCAAACGCGCGGAAGTACTCTCC
TCCATGTTAGGGGAAGGAGGGGGAGGAAGATGGATTTATGCGTCAGATTT
CTATAGGCAGGAATTGGAGGAGCAGGCGAGGGACAATCTTCTGGGGGAGA
TTCAGATGTTGCGGGAAGGGGTCATTCCCTATGAGGAGCAGAAGGGGGAG
AAGGAGGGGGAGGGAGGGAAGGGGGAGATCTAGTAGTGCATGGCATTCGT
CGCAAAAAGGCACGGCTCCGACTGAGGCTATAGGCGTGGAGGGATGGATC
GTCTGAGATTGCAACTGAGATATGGAGGAATGGAGGAGTCGTGGGGAGGT
TAGAGCGGCGCCTACCAGATACTGATAAAGTCTGTGGACTATAATCCATA
TGAAATGCATGTCGACATGAAACTTAGGAGGGATGGTTGGGTTGTCCCCG
GGGAGGGGAGAGTATTTGATGAGGCGGACGAGGAGGGAGAGACGAAGGGG
GGAAGGGGGAGAGGGAAGGAGAAAGAAATGAGAAGGAATGATGACATATT
GCAGGAGGATGTTGCTTGTTATGA
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protein sequence of NO05G00700.1

>NO05G00700.1-protein ID=NO05G00700.1-protein|Name=NO05G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bp
MAAAALREASPGIKVDTALHVTFSSTMEVGLYVRWRRALDGDDARTTGAS
APEEAVLDRWWQEIVQGYTNPVRRYHGLTHLQQMFGEMDRHAGRLARPDL
VALAIFFHDLIYDPGSSTNEEDSAERFHLFAQEATRLPMKDIKKVHTYIL
ATKTHKPAPPPIEDDKDEDLLLFLDIDMSILGQPRQVYMIKLAPSFPPLK
EEGGRCLHDFSIAQPSPVAPSEPSFEHEIVIIASTPVPFAPSTNMYLASP
TSPNARKYSPPC*
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Synonyms
Publications