NO05G00670, NO05G00670 (gene) Nannochloropsis oceanica

Overview
NameNO05G00670
Unique NameNO05G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5862
Alignment locationchr5:219759..225620 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:219759..225620 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00670.1NO05G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100348g6gene2258Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00670.1NO05G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00670 ID=NO05G00670|Name=NO05G00670|organism=Nannochloropsis oceanica|type=gene|length=5862bp
TGTTCATCAAGACAGGGACTCGCAATACCGCCTGCAGCGCAGCACGTTGG
CCATGCTCGCACACATCTTATCCAGGATAACACCAGCACCCACACACACC
AAACGACCTGCGCAAAAAACAGCAGGGGGGAAACAGGGAAAACATGGCGC
GTAGCATGCCTCCCTTTCGAAAGTGTTCTTATCAGTACTTTGTGAATTTT
GCCACTTTCCTGAAGTAAGTTATTGCATTGCCACCTCACTTGAGGCCATA
TTCATCCTACTCTTCTTCCTTCTCCTCCCCACTCATTAATCCTCTCCTAA
CCGTAAGAGTAAAAGTAGAGGGAAACAACGATCCGCTCGCTTCTCATCTA
CCTGCCCCTCTTCAAGTAATCACAATCACTCCATCAATCTTAAAACCGGC
TTCAGTATTTCATGACAAACATTTCCCTCTGCCGCACTTCATTTCCTCCA
TTTCAAACTCCTAGTCCCCTCTCTTCTCAATCAAAGAAACGCGGGACCGT
TCTCGTCATCTTCGCCGCCCCACTCAAATCAAAGCCGAGCGTATAAGGAA
TTTGCTTGTCCTTTAATATCCTAACCACCCACAACGGACTCGACCACGTC
TTCCCATTTTCAATCGGGAACCCCTCGCCAATCCGTACCCTTTCCGTCGT
CGTCGCCGCCCCTTCTTCCTTCTCAATATACGCGTACGCCACATTACCAC
CTTCCAACAACTCCACCCTTTCAATCTTTTTCTCATCAATTAACTTCAAA
AAAGCAGGCATGTCAACATTAGCTTCACCCGTTTCCAATTTAGGAGCTCC
TCCGTAGTCCGGGCCATTGTAACTCCCACAGCCAAACCCAAGGCACGTGC
TTTCCATCACGGTTTTGTCGGCCACGAGTACGGTAGAGGAGGGAAAGGAT
ATTAGAGTTTTAGTGCTTACGACCCTTTCAACGGCATTAGTCACGACGGG
CGAGGAGAAGTAGGCCCCGCCAATGAAGACTGTGGAGGTCAGGCGCAGGA
ACGTGCTGAATGAGGGGGTGAGCTTGCTTTCGAGGTCGTCATTCTGGTTT
TGAGGGGAAAACACTGCCAGCCGGGTGATGATGGGTCGGGCTACCGCATG
TGGTGGTGGCGTGACGGTGAAAGCGTATGTGATGGTGGTAGTTGTGGTGG
CCATGGCCAAGAGAAGGAGGGCGGCGTACATTGTTGCTGCGCCCGACTGT
GCATGGGAGTTGGGAGTAGGAATAAGCATCGGGATCGTGAGAATCAAACT
TGCCTCTAGCTTTGAGAAATCGTTCAGATATTTTTACAGGCCAGGGTGCT
GGTTTAGGCAAAAAAAAAATGCAGATGCACATTGCAACTGAGGCGTTATA
CAATAGTTGCAGGAGAGGGCCATTTTATGATATAGCGGCGAGGGAATGCC
ACCACAACCGATACCCACCACTCCCGCTCTCCATACACACCTTAAAACTC
AAGAAACATCTCCGCAACAAGGAGCTCGACCACTTGCTATTCCAAGgcaa
gtgtggaggcgcgggagcatctattgcgcattaataaatcagatgcctca
cattcccttcgcaacgcatgcacagGCAGGCCGAGCTTTGCCCTCGGCCT
GATGACGGCACAACCACCATTACAACGAGCCTGACTCGTCAAGTTACAAG
AAGATGAAGGACAAGGCGTACTTCGAGGCCAGCCTTGGCCTCGGGGGTGG
CAACAATAGAGACAGAGGAGACGCCATGCTGGCCGAGGACGACGACCTGA
TGACCACCTCCACCCCCGACGTCTCCGACACCTATTTCCTCCTTTCCGAA
GCGGCGCTCAAGGGCGTCGTCCCTTCCCCACCCACTCCCAATTATCTCTT
GAACGAAGGTGGGCAAGGGGTGATGATGCTACCCCCAGCACTCCCCTCAA
CATTACCAGCAGCAACATCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCACAATCACGCCCCCTTCCTTTTCCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCGCGTCCACCGCATCCCTTCTTCAATCACAAGCACGTT
TACCCCCAGCAAGTCCGGGAACTGAAGCCTACAACACTCTGCTGTTACTC
GGAGATCCCCACCACCCTCCCCACCATCAACTCTCTCCTCCTCTACTCCT
CCATCTATCGGGATCAGTCAGTGGAGGAGGGAAAGCAGAAGCAGATGGAG
GAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGAGGGGAATGAGGGG
ATGAGTAGTGTAAATTCCACTACTCTACTGGTGGATGACTACCTAAGGAC
ACAGGCCACAACGACAACCCTGATGGTTGAGGGGGAGGAAGGGGAGGAGG
AAATCGACACTTTGGGGAACATGATTACAGCGATACCACCGTCTCTGCTA
CCAAATCAACCATCGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCGGCA
GCAGCCGGAGGATCAGGAGCAGAAGGAGGAGCAGCAGCAGCAGTCGATGC
CCCCCCCGAGCAGGAGGAGCAGCCGCAGCAGCCGCAGCAGCAACAACAAC
ATTAGCAGTAGGATCAACAAAAAGCGGGGGGAAGGACCACGGCGTCCTCC
CACGGACAGCACTTGCGGAAGTGAAAAAGGAGGAGGCGGAGGAGGAAAGG
CAAGCATCAGCGACCTCTCTACAGGCATGGGCACAGCACATGCAGCAGCA
ACACATACATCACAGAAGAAGCACGCGCCCTTGGGCCAGTGGGTCACGCC
TCCTCAACCTCAGTACACCATTCCGAAAACAGTTTCGGATCTCGACATGC
CCTCGATAGCTGGCCCTCCGATGGCGCCTTTTGGCTCTGCTGGCAGTGGT
GGTGGTACTGCTACTGCTACTGCTGCTGCTGCTGCTGCTACTTCCGTAGG
GCAAGGAGGGGTGGATGGTACTGTCGCTCCTGCTTTGGTTGATGGTGTTG
GAGATGCGCAGTCGTTGTCTGTGTCGGCGTGGGCCGAAGCGAGTAGTCTG
GCAAGAGGAGGAGGAGGAGGAGTGGGACGAGAAGGGAGAGGCGGAGGAGG
AGTGGGACGAGAAGGGAGAGGCGGAGGAGGAAGAGATGGGAGGAGGAACA
CCAGTGAGCGCACCAGCAAGATGTCTCTCACTTCCTTGTTGCCTACATCA
TGGAGACGACGGAGACGAGGAAGCAGTAGCAGCAGCAGCAGCAGCAGCAG
CAACGACAGCAACAGCAATAGCAACGATACCATTCAAGACACAACAGTAA
CGTCTCCCCTTCCTCTTCAAACCGCTTCCCTTCCTTTTCCTCCTCCTCCT
CCCCCTCCTTGCTCCTCCCATCCTGCCCGGGGTCCAACTCCCTCCCTCCT
TCCCCTTAGCCCTCATATTGGCAGCAAGTCCTTCTCCTTCCACAATTTGC
CGAGTCTCACTTCTCTTTCTCCATATTTGATTCCTGTTGCTGCTGCTTCT
GCTACTGTTTCAACTACTGCTGCTGCGTCTGCTTCTCCTTGTCTGACGAC
ACAGCAGCAGCAGCAACAACAAAAATTGTTGCAACAGCAAATGTACCACA
ATCATCTCCTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAACAACAACAACAACAACAAGAACACCACCACCAACAACTCCTGCTGCA
GCAGCAACAACAGCAACCTCCTGCTCGCTTTTATAAACCACCGGAAGGAG
GAGTAGTTGCAGCAGGAGGAGGAGGAACCGAGGGTATCAGGCCTACAACA
AGAATTGCCGACAGCAACAGCAGCAATATCCATAGCATCAGCAGCAGCGG
GAGCAAAAGACAAGGAATAAAGCGGGAGGTCTCCTACCCCGACATTGCAA
GCATATCCCTCACTGCCTCCTCCGCTACTTCCCCCTCCCCCTCTTCCTCC
TCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTTCTCCTCCTTTGCTTCGTC
CTCCAGCAATCTGCAACATACCTACACATCATCCCTCCCTTCCCCGTCCT
CCTTGCCTTCCTCCACTCTCTACTCCTCCCTATTTTCTCACGCGGCTGCT
TCCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTAGCCCCTTCTTCAGC
AAATGCGACCACATACAACCAGCCGGAAGTAGCAGCAGAGTCAAGAGAAG
AGAGGAAAGGAGTGGAAAATGGATCCCTATTAAGATGCAAGAAAGCTGGA
GAGGACAACAATTATGGAATGACTTATGACGAGGAAGGGGAGGAGAAAAG
GAGGGAGGAATGGGGAAGGCAACCTATCGCAACGGTAGCCGTTGACAAAG
CCAAACGGCAGCAGGAGCGGTTGGCGAAAAATAGGGCATGGTCCCGCCTT
CGACGACAGAGGAATCGAAATTTAATTGAAATATACGAGGAAGAGATAAA
AAAGATGGAGGGGCACTTAAAGGTGCTGTCTCAGTGGCAGCGGCAGCAGA
GGGAGAGAGGAGGGAAGAGGAAGAAGGAAGGTGCTCCTGGCGGTAGGAGA
AGGGATCGAGGAATGTTTCTCCCTTCCTCCTCGTCCTACTTCTCCTCTTC
CTCGTCTTCCTCCTCACTCTTTCAAGAAGCCATGGGCAGAGAGCGCGTAC
TCTCCATGCCTCCGTTCCCCCTTCCCTCCCTCGCTACCCTACAGGAAAAC
ATTCAACAAACATGCGAAGATGAAGTCAGAGAACTTAAAAAAGACGCACA
AACACTTGTGGCCCTGCGAGGGGCAGTAAGAGGGAGGGAGGGAGAATTGT
GGCAGGAGTTGGCCATGAGCACGGCGCAAATATCGGCGCTTCTTTCGATC
CTTTGTGAGGGCCCAGGGGAGGGAAGGCAGGTTAAAGGTGGCGAGAGCGA
GGAGAGGAAGAAGGAGAGGGAGACAGAGCAGATGCACAAGGAGGACGAGG
ACGAGGACGAGGACGAGGGCGGGAAGGAAGACGACTTCGGCCTTGCGGCA
GTGGAGGCTAGCTTAACGCGTCTACAAATGAGTGTCGCTTGGGCTGCAAC
CCCCCCCTCTCAAGCCGCTGTGTCTGCAATGACGACAGCTACGGCTGCTG
CTCATGCGGCGGCGACTGCTTCTTCTTCGTCTTCCTCCTCTTTGTCTTCT
TCTTCGTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCCTCTGT
CTTTCCACGTGCGAATGAGGCATTGATGGAATTAGCAGCTTTACTGGACC
CGGAGCAAGCAAGTCGATACTTGGAATGGGCTGATGCGAATCGAGAGGCC
ATAGCGGGGTTAAGTTTGGGAGGAGAAGGAGGAGGAAGAGGAGTAAGGGG
GGAGAGAGGAGGAGAGGAGGGGAATGGTGGCGGCAGTCGAGGAGGAGGAC
GACGGGAGAGTGGAGGAAAAGAGGGCGGGAAGATAAGTCGCTTTCATTTC
TTCAGCAGCGCGGAAAATCCGTTTGTGACAAAAAAGAAGTTCGTGCTGTC
TTCCTCCGTGTCTCCTTTATTTGGTAGTGGCTCCGGGGGATTCAAGTGAT
GAGAAAGGGAGGGATGTACATACGAATGTTTGAATAAGACGTGAAGGGCG
TTGCTGTCCTACGGGGTGAGGGTGAGGGTCGACCCATGTCAATTTTGTAG
GTGCGAGCGTCTTGATAGTGTCAATTAGTCCCGATGTGCATTTGAAATGA
CTTAGACGGGAAGAATTTTTGCAAGAAGCCCCATGGTAACCGTGAGGAGA
GAGATCAGAGTGGGTGTACATATGGAGGGACTGGCAAATCAGTCAGCTTT
GTGTGTAAATGTAGGCAGCGAAAAACGAGATAGAGAGGACAAAGAAAGGG
GAAAAAGGAAGCTACTGGATGCTTCATAACAATACAGATAAAGGATGCTC
CATTACAATACA
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protein sequence of NO05G00670.1

>NO05G00670.1-protein ID=NO05G00670.1-protein|Name=NO05G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1282bp
MKDKAYFEASLGLGGGNNRDRGDAMLAEDDDLMTTSTPDVSDTYFLLSEA
ALKGVVPSPPTPNYLLNEGGQGVMMLPPALPSTLPAATSAAAAAAAAAAA
AQSRPLPFPSSSSSSSSSSSASTASLLQSQARLPPASPGTEAYNTLLLLG
DPHHPPHHQLSPPLLLHLSGSVSGGGKAEADGGGGGGGEGEGEGEGNEGM
SSVNSTTLLVDDYLRTQATTTTLMVEGEEGEEEIDTLGNMITAIPPSLLP
NQPSQQQQQQQQRQRQQPEDQEQKEEQQQQSMPPPSRRSSRSSRSSNNNI
SSRINKKRGEGPRRPPTDSTCGSEKGGGGGGKASISDLSTGMGTAHAAAT
HTSQKKHAPLGQWVTPPQPQYTIPKTVSDLDMPSIAGPPMAPFGSAGSGG
GTATATAAAAAATSVGQGGVDGTVAPALVDGVGDAQSLSVSAWAEASSLA
RGGGGGVGREGRGGGGVGREGRGGGGRDGRRNTSERTSKMSLTSLLPTSW
RRRRRGSSSSSSSSSSNDSNSNSNDTIQDTTVTSPLPLQTASLPFPPPPP
PPCSSHPARGPTPSLLPLSPHIGSKSFSFHNLPSLTSLSPYLIPVAAASA
TVSTTAAASASPCLTTQQQQQQQKLLQQQMYHNHLLQQQQQQQQQQQQQQ
QQQQQQEHHHQQLLLQQQQQQPPARFYKPPEGGVVAAGGGGTEGIRPTTR
IADSNSSNIHSISSSGSKRQGIKREVSYPDIASISLTASSATSPSPSSSS
SSSFSSFSSFSSFASSSSNLQHTYTSSLPSPSSLPSSTLYSSLFSHAAAS
SAAAAAAAAAVAPSSANATTYNQPEVAAESREERKGVENGSLLRCKKAGE
DNNYGMTYDEEGEEKRREEWGRQPIATVAVDKAKRQQERLAKNRAWSRLR
RQRNRNLIEIYEEEIKKMEGHLKVLSQWQRQQRERGGKRKKEGAPGGRRR
DRGMFLPSSSSYFSSSSSSSSLFQEAMGRERVLSMPPFPLPSLATLQENI
QQTCEDEVRELKKDAQTLVALRGAVRGREGELWQELAMSTAQISALLSIL
CEGPGEGRQVKGGESEERKKERETEQMHKEDEDEDEDEGGKEDDFGLAAV
EASLTRLQMSVAWAATPPSQAAVSAMTTATAAAHAAATASSSSSSSLSSS
SSSSSSSFSSSSSSSVFPRANEALMELAALLDPEQASRYLEWADANREAI
AGLSLGGEGGGRGVRGERGGEEGNGGGSRGGGRRESGGKEGGKISRFHFF
SSAENPFVTKKKFVLSSSVSPLFGSGSGGFK*
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Synonyms
Publications