NO05G00640, NO05G00640 (gene) Nannochloropsis oceanica

Overview
NameNO05G00640
Unique NameNO05G00640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3638
Alignment locationchr5:211711..215348 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:211711..215348 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G00640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003816NSK003816Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00640.1NO05G00640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00640.1NO05G00640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00640 ID=NO05G00640|Name=NO05G00640|organism=Nannochloropsis oceanica|type=gene|length=3638bp
ATGGAGCTGGACTCTCGTGGCTTCAAGCCCCAACCAGCAGGAAGTAGCAG
CAACGAGACCGCGGCATCTTCCTCCTCGACGCTGAAAGCCGTTTGGTCGC
CACCACCACGTTTGCCGCCATCGCGTTCGCAGCAGCCCCAGCATCCATCC
CCATTGCATTACGATACTCCTTATCATCGTTATGATCATCATCATTACCA
TCAGCAACAGCATAATCAGCATTCTCCCCCTACTTTTTTGGACGTTACTT
CTCCCCAAAACGACTCTGGCTACCGCGAGGACGATGCAGAGGGAGGCACC
GGGGCCCTGCCGACGATGCCTTTACAGCAGGAATTGCTGCGCATGGTAGC
CCTATTAGAAGATGAAGTGAGTATTCTCCAGATTCAGCTGAAATATACTA
CTACCACCGCCATTCAGAGCGAACAAGAGGCAATCGAAGCGCTACATGAC
CTTGAAACAACGCATGAAAAGCTTCTGCAGGAGATGAAGGAGAAAGAGAA
GTTGGCGCGAAAGGTGTTGGTTTTGGAGAGCGAGAGGAAGTGGGAAGGAG
CAGGTACAGCAATAGCAGCAGCTGGAGAACGAAGAGAAAGGAATTCGGTT
TTGGATGGAAAGGAGACAGAGGGTGGGATGGAGGGGGACGTGGACGAGGA
GAAGGGAATGGTGGGGAGGAGGGGAGGGAGGGAGGAGGGGGCGGAGGAGG
AGGTAATTATGGTATTGCAGCAGCAGTTAAGGGAGACACAAGAGCATGTG
GAAAAAATGAAGAGAGAGTGCGAGAAGAGGGAGGAGGTGTTAATTGAGTG
GGTTAAATCCCTCGAAGAAGAAGAAGGAGAAGAGGAGGAGGAGGAGGAGG
ACGACGACGAAGAGAGGAAGGAGTTGAGTAGCATGGTAGCGATGGATGCG
GGTATTCTATCGGCAGTGAGGCGTCCCTTGAAAGAGGAGGTGGAGAAAGA
GCTCCGGCAGGAGCAGCAGCAGCAGCAAGAGCAGAAGGAAGAAAACGGGG
AACAGAAACGTCTCCGAAGAAACCTTCCTCCTCTTCCTTCGTCTTCCCTC
CCTCCAATCATCGCCGCCGCAACAAACAACAAGAGAAAACGGCGGCCCCC
CTCTTCTTCTCCTATTCCTCCTCCTGGGGCACTTTCTCCTGCTGCTTCTG
CTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGTCGCTGCTGCTGAAGGA
GGGTGGGAAGCGCGCCTCTCCCTCCTCCTCGAGCAACGACGGGTTCGAGA
AGAGGAAACTGCCGACCGGCTTTCCATGGCTTTGGGGAAGCTTGTAGAGG
AGAGGAGACATGCGAGGGAAGAAGCTGAAAAAATGACAAAGCTGAAGGAG
GAGAATGTGGCATTATGTGCGGCATGGGAGGAGGAAAGGAGGGAGGAAGG
GGTGGTGAGGCAGGCGCTGGAGAAGAAGGTAGAGAAAATGCGCGAACGAC
TGGATGAACTCGAGGGTAGGGTGGGAGGCAGGAAAGCCACAATGGCGGCA
GCAGCGGCGGCAGCAGCAGCTGCTGCAGCAGAAGAAACGCTGGAGGAGGA
GAGATTGGAGAGAGAGAGGAGGATGAGGGAGGTGGAGGAGGAGAGGAAGA
AGGAAAGGGAGGCGGGAGCTTTGGTGCTTGAGGGGGAGAGGAGGGAGGGG
AAGCAGGCCAAAGACAGGCTTGAAAAAGAGAGGAGGGAGAGGGAGGCGCT
CATGACGGTGCTGGAGGAGGAGAGAAGGGAGGGTGGGAGGGTGAGGAGAG
AATTGGAAGGATTGAGAGAGCAGCTGGCGACGACATTGGATGAGGAAAGG
AGGGAGGGTGAGAGGGTGAGGAGGGAGATAGAGGAGGAAAGGAGACAAAG
AACAATACTGGTGTCGGCGCTGGAGGAAGAGAGGGAGGCTGTAGTTCAAA
TGGAGAGACGAATTTCGGCACTGCAGAACGCCCTGGAGCAGCAGCAGCAG
CAACAACAACAACAACAACAGGAGGCACATGCAGCAGTAGCAGCAGCACA
TGCGGAGGCACATGCAGCAGTAGCAGCAGCACAAGAAGAAGCAAGAAAGT
GGCGTGCGTGTTACGAAATGATAGAAGGAGTGCGAGTCCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
ACAACAACAACAAGAGCAGGAGGAAGGAGGGGTGAAGGAAGGGAGTGAGG
GGGGAGAGCAGGAGAGAGTGGAGGAGCTGAATAGGGAGTTCGAAAGGGCC
AAGAGGAAAGTCACGAGGATCTGTGAGGAGGAGAGGAGGAGGAAGGACTG
GAGGGAAAAATTGGGGAGAAGAAATGGAAGCACATGTCGGATGGGGGAAG
GAGGGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTACGATGTCATC
CGACGGAGGGGGCGTCCTTTCATGGAAGAGGAGAACGATGGAGGAGGAAT
GGAGGAAGGGAGGGAGGGGATGATGGATCGGGATGTGAGGCATGCGATGG
AATTGGGAAAGGAAGTGTGTGACCTTGTGGCGATTGCAGAAGAAGTGAGT
GTCCTGGAGGTGGGCATGGAGAAGGAGAATTTGTTGGAAGAATTAATAGT
TCAGTTGGAAGCGATGAAGGAGCGGGGGATGGTGGCGATGGAGGGGATGA
GGGAGAGGATGAAGAGAGACTTCCGAGTGTTGTTGCGGTGTCAGGCCGGG
ATTTTGAGGAGAGGGAGGGAGGGAGGGAGGGGTCGGTTGACTTTGACTGA
GGCTTGGAGGCGGCTTAAAAGTATTTAAGTCGGAAAGTACACCACAAATG
TAATGCGCGGGGCCGAAAATAAGTGCGGACCACAACAAAGAAAAATGTAA
GTGTATTCTGCTTAAGAACATGGGACCTTGAATCAGAAGTCTGACGGAAT
TAATAATCAATGAAAAAATCCCTTAATAGCCCTTTTTTCCATTTGCAAAA
TTTGCCGAGGTGTACTAAGAGCTATATACTTCAACAATCATTTTCCCTAG
CAAAGGAAATTTGATCTGTTTCTACAATTTAGTAATTATAGAGGATGGGC
ATACAAGTGTCAGAGCCCCACAAGCCCCGAGACGGTTCAAGTGCATAAGA
CTTGATCTTCGGCGCGCGCCATGAGAAGCCCTCCCGCAGGGTACTCTCAA
AAGAAACAAGACAAGACTTAGAGGCCGCTTCTCGCGTCTACTTGACAGAC
GACAGCACCAGTTATCACAAGAGACAGTATATGCCCTTCTTGCCACGCTC
TGGAAAAATTATCGAAGATTTTGGGGGGGGGGTACACAGCCACAGCCCTC
CCCTCCGAGGAGTCCTCGCCGGCGGGGCGGCAGATCCGAGCAAATGTCAA
CCCCGCACGCCGCACCAGTCCCTACCACGTGCTTCTGTGTCCCCCTGAAA
GTATTCCACCCACTGTTAGCGGTGGCCGCCATGGAACTCACGAAGGGGCT
AGCGCTCATGTATACACTTGTGTCTGGGACGGTTTGTGGATTGAAAATTT
CCGAGAGGAGAAAAGAGAGAAAGACGCATGAAAAAATGAGAGGCGAACGA
TCGTGAGTCGCGACGGTCTTCGTCCATGTCTGCCATGTCTGGGTCTGAAA
ATGAGTGCTTTGAACTGTTCATAATTATCTTGTGCTTC
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protein sequence of NO05G00640.1

>NO05G00640.1-protein ID=NO05G00640.1-protein|Name=NO05G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=926bp
MELDSRGFKPQPAGSSSNETAASSSSTLKAVWSPPPRLPPSRSQQPQHPS
PLHYDTPYHRYDHHHYHQQQHNQHSPPTFLDVTSPQNDSGYREDDAEGGT
GALPTMPLQQELLRMVALLEDEVSILQIQLKYTTTTAIQSEQEAIEALHD
LETTHEKLLQEMKEKEKLARKVLVLESERKWEGAGTAIAAAGERRERNSV
LDGKETEGGMEGDVDEEKGMVGRRGGREEGAEEEVIMVLQQQLRETQEHV
EKMKRECEKREEVLIEWVKSLEEEEGEEEEEEEDDDEERKELSSMVAMDA
GILSAVRRPLKEEVEKELRQEQQQQQEQKEENGEQKRLRRNLPPLPSSSL
PPIIAAATNNKRKRRPPSSSPIPPPGALSPAASAADAAAAAAAAVAAAEG
GWEARLSLLLEQRRVREEETADRLSMALGKLVEERRHAREEAEKMTKLKE
ENVALCAAWEEERREEGVVRQALEKKVEKMRERLDELEGRVGGRKATMAA
AAAAAAAAAAEETLEEERLERERRMREVEEERKKEREAGALVLEGERREG
KQAKDRLEKERREREALMTVLEEERREGGRVRRELEGLREQLATTLDEER
REGERVRREIEEERRQRTILVSALEEEREAVVQMERRISALQNALEQQQQ
QQQQQQQEAHAAVAAAHAEAHAAVAAAQEEARKWRACYEMIEGVRVQQQQ
QQQQQQQQQQQQQQQQQQQQQEQEEGGVKEGSEGGEQERVEELNREFERA
KRKVTRICEEERRRKDWREKLGRRNGSTCRMGEGGREEEEEEEEEEYDVI
RRRGRPFMEEENDGGGMEEGREGMMDRDVRHAMELGKEVCDLVAIAEEVS
VLEVGMEKENLLEELIVQLEAMKERGMVAMEGMRERMKRDFRVLLRCQAG
ILRRGREGGRGRLTLTEAWRRLKSI*
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Synonyms
Publications