NO05G00260, NO05G00260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO05G00260 vs. NCBI_GenBank
Match: CBJ29719.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 126.7 bits (317), Expect = 2.400e-25 Identity = 101/348 (29.02%), Postives = 169/348 (48.56%), Query Frame = 0 Query: 81 KKALLMAPSDLQGAVLVSGSL------EEEVFTLLNEQRVWNRITAFAADAVSARKRLTSRATRYSGVLDMLNLEEGDPHDLGVLESYLSSKPYSAWLDLSPEDADETRLLAKAKLAAATGIKFFVTAVSMSQARLEKQDLDLEAVEKVLRDAGIKFRILVTGQVIPAPATGYVRLNDTEALLPNATIARGDLARIATELFLVADEKPEAGVIYASEGDESVVGYLKYCREQGMNYKTEITDQLAGGLYTYKDKVAATMQEMADKAAGVLAKGAKKDTELYAAYRVNVTKAAIATEYD-KKRRTLVGMVKKIVGDILEEEYDDMYYSMRTK--EDLDLYKKANWQRAV 420 ++A +A S G VLV+G L ++ VF +L Q W +I AF+ A+KRL SR +RYSG+LD+L EEGD +D +E L K SAWL D + ++ + A G+K V + ++S A D VE L+D+G+++ + G+V+ G V + + LP + R D+ R++ E F++ + A +GD+ + YLK R+ G + +TE++ ++GG Y+ A E A+K +K + E AAI + K++ + +V+K + LE+E++ ++S T E+ NW RA+ Sbjct: 50 QRAADIAMSADGGKVLVTGFLNSKQRTDQFVFDILQAQGRWEKIVAFSDSVSFAKKRLVSRKSRYSGLLDVLEFEEGDKYDAATMEEKL--KGISAWLCF---DCEGDKIKESVEFAKKAGVKSMVISSTVSAA-----DASSAGVEDALKDSGLEYTFIRVGEVVEGKEGGSVMVGNVTDELPMEQVVRDDIVRLSAEAFMMENATNTAFAF--GKGDDIALAYLKELRQNGTDRRTEMSTLISGGFLEYQ---AIKEAEEAEKNKPPPSKEELEAQEKAFQEEREAEYAAIREQNAIKRQEDDIKLVEKEAKEFLEKEWNAQFWSRTTSLTEEEYFEDDDNWDRAM 382
BLAST of NO05G00260 vs. NCBI_GenBank
Match: EWM28366.1 (hypothetical protein Naga_101258g1 [Nannochloropsis gaditana]) HSP 1 Score: 110.5 bits (275), Expect = 1.800e-20 Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 0 Query: 1 MAARRFLVPLSLCLAAARAFLVVPPQSVLKAGDVVSIPAPFFSSPPAMQQGGRTKGALFSLVINPKRQGISQLGIEEIKAKKALLM 87 M A+R VP+ LCLA+A AF + PP+S+LKAG+VVS+P FSS QQ GR+KG LFSLVINPKRQGI+QLG+EEIKA+KA L+ Sbjct: 1 MTAQRIFVPIFLCLASASAFFMAPPRSILKAGEVVSLPDHLFSSSLTEQQAGRSKGVLFSLVINPKRQGITQLGVEEIKARKAALL 86
BLAST of NO05G00260 vs. NCBI_GenBank
Match: CEL97659.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 86.7 bits (213), Expect = 2.800e-13 Identity = 100/357 (28.01%), Postives = 153/357 (42.86%), Query Frame = 0 Query: 1 MAARRFLVPLSLCLAAARAFLVVPP--QSVLKAGDVVSIPAPFFSSPPAMQQGGRTKGALFSLVINPKRQGISQLGIEEIKAKKALLMAPSDLQGA-VLVSG------SLEEEVFTLLNEQRVWNRITAFAADAV--SARKRLTSRATRYSGVLDMLNLEEGDPHDLGVLESYLSSKPYSAWLDLSPEDADETRLLAKAKLAAATGIKFFVTAVSMSQARLEKQDLDLEAVEKVLRDA-------GIKFRILVTGQVIPAPATG------YVRLNDTEALLPNAT--IARGDLARIATELFLVADEKPEAGVIYASEGDESVVGYLKYCREQGMNYKTEITDQLAGGLYTY-KDKVA 331 M++ L+PLSL L+A AFLV P QS L+ P+P S ++ + P G QL +AP+ L+G LV+G ++ L+EQR+W I + +ARK LTSR RYSG+L +L EEGDP +L ++ L + + WL L+P + L AK A V V ++ +E D ++E + A K ILV G++ G + D + L A + G+ R+A E L+ A + S G+E YL+ R++G++ + E+ + AGG Y KD +A Sbjct: 6 MSSAMHLLPLSLMLSATAAFLVPSPPFQSPLRRHHARD-PSPLSSESAQLRPS----------FLRPDVGGRGQL--------TRRYLAPAKLEGGKALVTGLDATMERTDQRPLDALHEQRMWQPIAMLLPPEIKTAARKYLTSRVARYSGLLSVLTYEEGDPTNLAQIKQNL--QDVTVWLALNPPISQLNDYLLAAKGAG-------VQRVVLALGNIEGGASDWRSIESAMASALKEANSTEFKASILVAGKLSDGEDEGLGAPIRLTKCTDEDTLRTTAALGVGMGEFIRVAAEALLIPAAHGTATCL--SVGNEIADSYLRSLRQKGLSRRDELGELFAGGFEVYEKDYLA 332
BLAST of NO05G00260 vs. NCBI_GenBank
Match: GAX16515.1 (hypothetical protein FisN_7Lh236 [Fistulifera solaris]) HSP 1 Score: 68.6 bits (166), Expect = 7.800e-8 Identity = 97/427 (22.72%), Postives = 172/427 (40.28%), Query Frame = 0 Query: 87 APSDLQGAVLVSGSL-------EEEVFTLLNEQR---VWNRITAFAADAVSARKRLTSRATRYSGVLDMLNLEEGDPHDLGVLESYLSSKPYSAWLDLSPED--ADETRLLAKAKLAAATGIKFFVTAVSMSQARLEKQDLDLEAVEKVLRDAGIKFRILVTGQVIPAP----ATGYVRLNDTEALLP-NATIARGDLARIATELFLV---ADEKPEAGVIYASEGDESVVGYLKYCREQGMNYKTEITDQLAGGLYTYKDKVAATMQEMADKAAGVLAKGAKKDTELYAAYRVNVTKAAIATEYDKKRRTLVGMVKKIVGDILEEEYDDMYYSMRTKEDLD--LYKKANWQRAV---NLVLGMLMGKGEEAGGRDKASQRLTGFQDPYLGPQWHIIRSNAAVMIKIKELHDEIGERLTKEDWERYD 489 A S + G LVSG + ++ +F LLN Q +N+I AF D A+K+L SR+ RY+G+L+ L+ +GD L + + +WL D ++ +++AK A + + V ++ + LEA++K G + I GQ+ P A + + LP A +R + R+ TE+ + A+ IY E V ++ RE G EI L G Y+ + + D A G + + + R + + + +K RT ++ I + ++ EY + + D+ +K+ W RA+ +L + MG+ + L F+ Q +++ KEL + +GE + ED E+ D Sbjct: 71 ARSTIDGTCLVSGLIRPGVTTDDQFLFDLLNHQDSAFEFNKIVAFCPDTKLAKKQLISRSARYTGLLNKLDFAQGDS-----LPTAAQLEGVKSWLAYLQGDNLLEQVQIIAKTLAEAPSVENIAILLVGANELDVTASAAALEAIQK----TGKTYSIAAVGQLTDEPEGKHAYHFDQFGTVNGTLPAKAIFSRQESYRMITEMLQLEAGANRALSFAEIYNVNATE--VRLIRGLREAGYARLQEIDHMLRDGAKNYEKAIEEWLTSNPDAAKGYTTNAWWEQEQFQKSRRKSDERFLAEQQQEKDERT--KEIEAIANEWVKREYFRQSMAGTVENDMTEAEFKETVWDRALLEGDLKYRIKMGEVVD------EEMELADFKKRQERKQQELLKKAK------KELAEVLGEEIPDEDDEKKD 472
BLAST of NO05G00260 vs. NCBI_GenBank
Match: OEU13640.1 (hypothetical protein FRACYDRAFT_276115 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.2 bits (165), Expect = 1.000e-7 Identity = 71/278 (25.54%), Postives = 120/278 (43.17%), Query Frame = 0 Query: 91 LQGAVLVSGSLEEE------VFTLLNEQR---VWNRITAFAADAVSARKRLTSRATRYSGVLDMLNLEEGDPHDLGVLESYLSSKPYSAWLDLSPEDADETRLLAKAKLAAATGIKFFVTAVSMSQARLEKQDL-DLEAVEKVLRDAGIKFRILVTGQV-------IPAPATGYVRLNDTEALLP-NATIARGDLARIATELFLVADEKPEAGVIYASEGDESV--VGYLKYCREQGMNYKTEITDQLAGGLYTYKDKVAATMQEMADKAAGVLAKGA 349 L+G ++VSG + E+ +F L+N + + +I AF DA A+KRL SR++RYSG+LD L+ E G L + + ++WL D + A +V ++ A + D A + L+D G ++ +LV G++ +P + D +A LP +A +R + R+ TE L D + ++ D + +K RE G EI L G Y+ + +++ + A GV A A Sbjct: 89 LEGTIMVSGYVNEKERTDQYIFDLINHEDSAFEFKKIVAFVNDAKFAKKRLLSRSSRYSGLLDKLDFSEAASE--GALPTVDQLEGINSWLASVESKGDMIEQIKSIAALAKDASSLDNLSVMVTNAAGDGTSAEDRAAAVQALKDTGKEYTLLVVGKIEDRDEGKLPYKFRAFDSEIDEDASLPEDAVFSREEAMRMVTET-LQLDSGANKALTFSEVTDSNTTEAKLIKGLREAGYARCQEIDHMLRNGTENYQKALDEFLEKNPNMAEGVYATEA 363
BLAST of NO05G00260 vs. NCBI_GenBank
Match: XP_002182633.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45920.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 65.9 bits (159), Expect = 5.100e-7 Identity = 89/366 (24.32%), Postives = 142/366 (38.80%), Query Frame = 0 Query: 72 QLGIEEIKAKKALLMAPSDLQGAVLVSGSL------EEEVFTLLNEQR---VWNRITAFAADAVSARKRLTSRATRYSGVLDMLNL---EEGDPHDLGVLESYLSSKPYSAWLDLSPEDADETRLL--------AKAKLAAATGIKFFVTAVSMSQARLEKQDLDLEAVEKVLRDAGIKFRILVTGQVIPAP----ATGYVRLNDTEALLP-NATIARGDLARIATELF-LVADEKPEAGVIYASEGDESVVGYLKYCREQGMNYKTEITDQLAGGLYTYKDKVAATMQEMADKAAGVLAKGAKKDTELY-------AAYRVNVTK----------AAIATEYDKKRRTLVGMVKKIVGDILEEEY 395 Q ++ + A + A ++L G LVSG + ++ VF LLN + +NRI A DA A+KRL SR+ RY+G+LD L E+G + + K + A LD + D LL K +A I + + +A + +D ++ + ++ G + P A + EA+LP A +R + R TEL L A +++ +K R+ G EI L G YK + + + D A G A + ++Y A V TK AIA E+ K+ V M + D+ E+E+ Sbjct: 58 QTNLQSYLKEPAAVEARANLDGTCLVSGLVRSKERTDQFVFDLLNHEESAFEFNRIVALVPDAKFAKKRLLSRSARYTGLLDKLEFVQAEQGTDAAVATEAQLENVKSWVAVLDANDRDEQAQDLLETCRAIIAVAQKASALENIAILLAGANELEATACQAVVDELQALHAQPESPKTYTLVAVGALEERPEGQTAYAFADFGTPEAVLPAQAVFSREESLRFVTELLQLEAGANRALAFAEVYNQNKTEAKLVKGLRQAGYARPQEIDHMLRDGPAAYKQAIQDFLTKNPDAAKGYTTTDAWWEQDIYKQSRARTAEREVEKTKFALDERTQEVEAIAKEWAKREFFRVSMAGTVDADMTEDEF 423
BLAST of NO05G00260 vs. NCBI_GenBank
Match: KOO27724.1 (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 65.1 bits (157), Expect = 8.700e-7 Identity = 63/243 (25.93%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 105 VFTLLNEQRVWNRITAFAADAVSARKRLTSRATRYSGVLDMLNLEEGDPHDLGVLESYLSSKPYSAWLDLSPEDADETRLLAKAKLAAATGIKFFVTAVSMSQARLEKQDLDLEAVEKVLRDAGIKFRILVTGQVIPAPATGYVRLNDTEALLPNA-TIARGDLARIATELFLVADEKPEAGVIYASEGDESVVGYLKYCREQGMNYKTEITDQLAGGLYTYKDKVAATMQEMADKAAGVLAK 347 +F + + +++ITAF++ + +A+K L SR RYSG+LD+L EGD L S AWL + +ADE+ ++ K A A G+K +S S+A +D+ ++ L+ + + ++ TG + + + G + ++D + LP + D+ R TE + PEA + S L+ R G + + E+ L G + KV +E+ + AK Sbjct: 58 IFQFVYDFGEYDKITAFSSSSANAKKMLLSRNARYSGLLDVLEFAEGDSSKLKAAFS-----GADAWLTV---NADESTVVEHLKAAQAAGVKRAFVHLSASEA----PKVDIASIGSALKGGQLAYTVMRTGGLTKSGSGGGLLVSDVD--LPTCDEVPADDVFRFITEALTL----PEAEGRTFALCPTSDSSQLRAMRSAGCSRREEVLALLQGKI-KEGAKVEVNKKELTPEEVQAAAK 281 The following BLAST results are available for this feature:
BLAST of NO05G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00260 ID=NO05G00260|Name=NO05G00260|organism=Nannochloropsis oceanica|type=gene|length=4565bpback to top protein sequence of NO05G00260.1 >NO05G00260.1-protein ID=NO05G00260.1-protein|Name=NO05G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=607bpback to top Synonyms
Publications
|