NO05G00100, NO05G00100 (gene) Nannochloropsis oceanica

Overview
NameNO05G00100
Unique NameNO05G00100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length594
Alignment locationchr5:41558..42151 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:41558..42151 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO05G00100 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 127.1 bits (318), Expect = 6.100e-26
Identity = 79/201 (39.30%), Postives = 117/201 (58.21%), Query Frame = 0
Query:    1 MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTN--TKCTEKV--GKRTSKYICTPGAPTPAPTPGSTT 198
            M+R F LLALGITL +TA Q+  TL +++ +   +  +D WSMKG  +DP  TVV  I   G+   + D    TL    +   +C+L  N +G+ CKT G R+ IK ++R PKGA +  Q S+  +T  YY  SG+FRR +F+   I+ PL+  +++   P+  +   + C+EK+    RT++  CTPG PTP  TP  TT
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANV--QNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG-PTPV-TPAPTT 196          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 124.4 bits (311), Expect = 3.900e-25
Identity = 75/193 (38.86%), Postives = 113/193 (58.55%), Query Frame = 0
Query:    1 MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTN--TKCTEKV--GKRTSKYICTPGAPTP 190
            M+R F LLALGITL +TA Q+  TL +++ +   +  +D WSMKG  +DP  TVV  I   G+   + D    TL    +   +C+L  N +G+ CKT G R+ IK ++R PKGA +  Q S+  +T  YY  SG+FRR +F+   I+ PL+  +++   P+  +   + C+EK+    RT++  CTPG PTP
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYV--QNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG-PTP 208          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 123.2 bits (308), Expect = 8.800e-25
Identity = 77/199 (38.69%), Postives = 115/199 (57.79%), Query Frame = 0
Query:    1 MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKCTE--KVGKRTSKYICTPG-AP-TPAPTPGS 196
            M+RI SLLALG+TL +TA Q E TL +++     +  +D WSMKG  ++P   VV  I   G+   + D   + L    +    C+LL N +G+ CK  G R+ IK T+R PKGA +++  S++ +T  YY  SG+FRR +F+   ++TPL+  + +  +   +  + C+E  K   R +K  CTPG AP TPAPT  S
Sbjct:    1 MRRILSLLALGVTLVMTAGQ-EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKVKS--SNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPGPAPVTPAPTAAS 195          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 115.9 bits (289), Expect = 1.400e-22
Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 0
Query:    1 MQRIFSLLALGITLA---VTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKR--VPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKC---TEKVGKRTSKYICTPGAPTPAPT 193
            M+   SLLALGITL    VT A  ++ L SIRAV     NKD W MKG  NDP  T+V  I   G+   + D   + LN V +   +CR+  + +   CK  G R+ IKT++R  +    T+ A +S+N +T  YY ++G FR   F+   +++PL+A +++D S    T T C     K G+ T  + C PG P P PT
Sbjct:    1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRRPKIKTPKTVHA-KSYN-STGGYYSVTGTFRGLTFLENPVVSPLTAALTVDESVLSDTLTLCYNLPRKNGRNTISH-CEPGPPVPTPT 197          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana])

HSP 1 Score: 113.6 bits (283), Expect = 6.900e-22
Identity = 73/198 (36.87%), Postives = 103/198 (52.02%), Query Frame = 0
Query:    1 MQRIFSLLALGITLA---VTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKR--VPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKCTEKVGKRTSKYI--CTPGAPTPAP 192
            M+   SLLALGITL    VT     + L SIRAV     NKD W MKG  NDP  T+V  I   G+   + D   + LN V +   +CR+  + K   CK  G R+ IKT++R  +    T+ A+R +  +T  YY ++G FRR  F+   +++PL+A ++++ S    T T C +   K     I  C PG P P P
Sbjct:   69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYN--STGGYYSVTGTFRRLTFLENPVVSPLTAALTVNESVLSDTLTSCYDLPRKNGRNPITHCEPGPPVPTP 264          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 112.8 bits (281), Expect = 1.200e-21
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 0
Query:    1 MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKCTE--KVGKRTSKYICTP 185
            M+ I SLLALGITL +TA Q E TL +I+     +  +D WSMKG  ++P   VV  I   G+   + D   + L    +    C+LL N +G+ CK+ G R+ IK T+R PK A +++  S   +T  YY  SG+FRR +F+  T++TPL+  + +  +   +  + C+E  K   R +K  CTP
Sbjct:    1 MRCILSLLALGITLVMTAGQ-EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKVKS--SSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTTTLPAIVSTCSERTKSAGRITKITCTP 182          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 112.1 bits (279), Expect = 2.000e-21
Identity = 64/181 (35.36%), Postives = 103/181 (56.91%), Query Frame = 0
Query:    1 MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKCTEKVGKRTSKYI 182
            M+RI SLLALG+TL +TA Q E TL +++     +  +D WSMKG  ++P   VV  I   G+   + D   + L    +    C+LL N +G+ CK  G R+ IK T+R PKGA +++  S++ +T  YY  SG+FRR +F+   ++TP++  + +  +   +  + C+E    RT  Y+
Sbjct:   37 MRRILSLLALGVTLVMTAGQ-EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKVKS--SNSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKVGSTTLPAIVSTCSE----RTKGYV 209          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana])

HSP 1 Score: 107.8 bits (268), Expect = 3.800e-20
Identity = 69/197 (35.03%), Postives = 104/197 (52.79%), Query Frame = 0
Query:    1 MQRIFSLLALGITLA---VTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHN-TTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKCTE--KVGKRTSKYICTPGAPTPAP 192
            M+  FS LA+GIT     VT A  ++ L SIRAV    ANKD W MKG  +DP  T+V  I+  G+I  + D   + LN V +   +CR+  N +   CK  G R+ IK+++R PK  T +   +    +T  YY ++G  R   F+   +L+PL+A ++++      T T C +  ++  R +   C PG P P P
Sbjct:    1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRR-PKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNGDVLSDTLTSCYDLPRMNGRNTITHCEPGPPVPTP 196          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 107.8 bits (268), Expect = 3.800e-20
Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 0
Query:    1 MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVS-TNTKCTEKVGKRTSKYICTPG--APTPAPTPGST 197
            M+R  SLLALG+TLA+T  Q  ++L SI+     R NKD WSMKG   DP   VV GI   G+   + D   +TL+   +   +C +  N KG  CK  G R+ I+ +K  PKG  ++   S    T  YY +SG FR  +     +++PL+A +++     +S T T C+ + G  T++  C PG   PT APT  ST
Sbjct:   68 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSIRASK-PPKGVKVKTYNS----TGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPGPIIPTNAPTAAST 259          
BLAST of NO05G00100 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana])

HSP 1 Score: 107.8 bits (268), Expect = 3.800e-20
Identity = 72/200 (36.00%), Postives = 103/200 (51.50%), Query Frame = 0
Query:    1 MQRIFSLLALGITLA---VTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDPDGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTGTRLLIKTTKR--VPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTPLSAGISIDFSPYVSTNTKC---TEKVGKRTSKYICTPGAPTPAPT 193
            M+   SLL LG+T     V  A  ++ L SIR V     NKD W MKG  NDP  T+V  I   G+   + D   + LN V +   +CR+  + +   CK  G R+ IKT++R  V    T+ A +S+N +T  YY ++G FR   F+   +++PL+A + I+ S    T T C     K G+ T  + C PG P P PT
Sbjct:    1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHA-KSYN-STGGYYSVTGTFRGLTFLENPVVSPLTAALRINGSVLSDTLTSCYDLARKSGRNTISH-CEPGPPAPTPT 197          
The following BLAST results are available for this feature:
BLAST of NO05G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 17
Match NameE-valueIdentityDescription
XP_005855033.16.100e-2639.30hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM30036.13.900e-2538.86hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
EWM30045.18.800e-2538.69hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM27399.11.400e-2238.00hypothetical protein Naga_100212g1, partial [Nanno... [more]
EWM27397.16.900e-2236.87hypothetical protein Naga_101181g1 [Nannochloropsi... [more]
EWM20135.11.200e-2137.10hypothetical protein Naga_101626g1, partial [Nanno... [more]
EWM20105.12.000e-2135.36hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM20775.13.800e-2035.03hypothetical protein Naga_100549g2 [Nannochloropsi... [more]
EWM22005.13.800e-2037.69hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
EWM26484.13.800e-2036.00Neuraminidase, partial [Nannochloropsis gaditana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR096ncniR096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00100.1NO05G00100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634357gene_10728Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00100.1NO05G00100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00100 ID=NO05G00100|Name=NO05G00100|organism=Nannochloropsis oceanica|type=gene|length=594bp
ATGCAACGCATTTTTTCTCTGCTTGCCCTCGGTATTACCCTCGCCGTTAC
GGCGGCTCAAAATGAGATAACTCTCACCTCCATCAGGGCAGTCAGCGCAC
ATAGGGCGAACAAGGACCTGTGGAGTATGAAGGGCTTCTTCAACGACCCT
GACGGGACAGTTGTGGATGGCATCAGTGATTTTGGAGTGATCGCAGGGAT
TGCAGACAAGGACCAAAACACCCTCAATATGGTTCCATACAGACCGATTG
AGTGCAGATTGCTCAACAACGACAAAGGACTTGTTTGCAAGACTACGGGC
ACCCGCCTCTTGATCAAGACGACCAAAAGGGTTCCGAAGGGCGCCACAAT
TCAGGCGCAGAGGAGCCACAACACAACCACATCCTCCTATTACATGCTTT
CGGGTGTTTTCCGCCGTCAGGAGTTCATTAACGCCACTATATTGACGCCT
CTTTCTGCTGGCATCTCCATTGATTTCTCCCCTTACGTGAGCACCAACAC
AAAGTGCACAGAGAAAGTTGGAAAGAGGACAAGCAAGTACATCTGTACGC
CTGGTGCTCCTACCCCCGCTCCTACTCCTGGATCAACCACCTAG
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protein sequence of NO05G00100.1

>NO05G00100.1-protein ID=NO05G00100.1-protein|Name=NO05G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MQRIFSLLALGITLAVTAAQNEITLTSIRAVSAHRANKDLWSMKGFFNDP
DGTVVDGISDFGVIAGIADKDQNTLNMVPYRPIECRLLNNDKGLVCKTTG
TRLLIKTTKRVPKGATIQAQRSHNTTTSSYYMLSGVFRRQEFINATILTP
LSAGISIDFSPYVSTNTKCTEKVGKRTSKYICTPGAPTPAPTPGSTT*
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Synonyms
Publications