NO05G00070, NO05G00070 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_023143892.1 (lysosome membrane protein 2-like isoform X2 [Amphiprion ocellaris]) HSP 1 Score: 70.1 bits (170), Expect = 4.600e-8 Identity = 44/156 (28.21%), Postives = 82/156 (52.56%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVRVGIPRVLNDV 283
L ++GIA ++ + F M +LK+++ +T +Q E+ W P + +F+N+TNP FLAG + + +GP+TYR+++ R +V F ++G+ + Y N K V P + G + I +N Y ++ S S ++R + +N +
Sbjct: 18 LLIVGIALVVAQVFQTMIHSRLKKEITLTEKSQVFES--W---KNPPPPVYMEYYFFNVTNPEVFLAGGKAAVKQIGPYTYREYRPRENVTFLENGTKL-YALNPKTFVFVPEKSAGNPEVDIIRTVNIPYVAVLSELSSYSFLLRTFVSMYMNSL 167
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_023143891.1 (lysosome membrane protein 2-like isoform X1 [Amphiprion ocellaris]) HSP 1 Score: 70.1 bits (170), Expect = 4.600e-8 Identity = 44/156 (28.21%), Postives = 82/156 (52.56%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVRVGIPRVLNDV 283
L ++GIA ++ + F M +LK+++ +T +Q E+ W P + +F+N+TNP FLAG + + +GP+TYR+++ R +V F ++G+ + Y N K V P + G + I +N Y ++ S S ++R + +N +
Sbjct: 18 LLIVGIALVVAQVFQTMIHSRLKKEITLTEKSQVFES--W---KNPPPPVYMEYYFFNVTNPEVFLAGGKAAVKQIGPYTYREYRPRENVTFLENGTKL-YALNPKTFVFVPEKSAGNPEVDIIRTVNIPYVAVLSELSSYSFLLRTFVSMYMNSL 167
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_003975162.1 (PREDICTED: lysosome membrane protein 2-like isoform X1 [Takifugu rubripes] >XP_011614298.1 PREDICTED: lysosome membrane protein 2-like isoform X1 [Takifugu rubripes]) HSP 1 Score: 69.3 bits (168), Expect = 7.800e-8 Identity = 43/149 (28.86%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVRVGI 276
L ++GIA ++ + F M +LK++ +T +Q E+ W P + +F+N+TNP FLAG + + +GP+TYR+++ R ++ F ++G+ + Y N K+ V P +VG + + +N + + S S +R GI
Sbjct: 18 LLIVGIALVVAQVFQTMIHERLKKEFTLTEASQVFES--W---KNPPPPVYMEYYFFNVTNPKEFLAGGKAAVQQIGPYTYREYRPRENISFLENGTKI-YALNPKSFVFVPEKSVGNPEVDIVRTVNIPFVAVMNELSSYSFFLRTGI 160
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_011614299.1 (PREDICTED: lysosome membrane protein 2-like isoform X2 [Takifugu rubripes]) HSP 1 Score: 69.3 bits (168), Expect = 7.800e-8 Identity = 43/149 (28.86%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVRVGI 276
L ++GIA ++ + F M +LK++ +T +Q E+ W P + +F+N+TNP FLAG + + +GP+TYR+++ R ++ F ++G+ + Y N K+ V P +VG + + +N + + S S +R GI
Sbjct: 18 LLIVGIALVVAQVFQTMIHERLKKEFTLTEASQVFES--W---KNPPPPVYMEYYFFNVTNPKEFLAGGKAAVQQIGPYTYREYRPRENISFLENGTKI-YALNPKSFVFVPEKSVGNPEVDIVRTVNIPFVAVMNELSSYSFFLRTGI 160
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_015828751.1 (PREDICTED: lysosome membrane protein 2-like isoform X1 [Nothobranchius furzeri]) HSP 1 Score: 69.3 bits (168), Expect = 7.800e-8 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGIN 255
L ++GIA +L + F M + +LK+++ +T +Q EA W P + +F+N+TNP FLAG S + +GP+TYR+++ R +V F ++G+ V Y N K V P + G + + +N
Sbjct: 18 LLIVGIALVLAQVFQTMIQSRLKKEITLTEKSQVFEA--W---KNPPPPVYMEYYFFNVTNPEVFLAGGKASVQQIGPYTYREYRPRENVTFLENGTKV-YALNPKTFVFVPEKSAGNPEVDLVRTVN 139
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_015828752.1 (PREDICTED: lysosome membrane protein 2-like isoform X2 [Nothobranchius furzeri]) HSP 1 Score: 69.3 bits (168), Expect = 7.800e-8 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGIN 255
L ++GIA +L + F M + +LK+++ +T +Q EA W P + +F+N+TNP FLAG S + +GP+TYR+++ R +V F ++G+ V Y N K V P + G + + +N
Sbjct: 18 LLIVGIALVLAQVFQTMIQSRLKKEITLTEKSQVFEA--W---KNPPPPVYMEYYFFNVTNPEVFLAGGKASVQQIGPYTYREYRPRENVTFLENGTKV-YALNPKTFVFVPEKSAGNPEVDLVRTVN 139
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_021180175.1 (lysosome membrane protein 2 [Fundulus heteroclitus]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 41/131 (31.30%), Postives = 73/131 (55.73%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAY 258
L ++GIA ++ + F M +LK+++ +T +Q E+ W P + +F+N+TNP FLAG+ S + +GP+TYR+++ R +V F ++G+ + Y N K+ V P + G + I +N Y
Sbjct: 18 LLIVGIALVVAQVFQTMIHSRLKKEITLTEKSQVFES--W---KNPPPPVYMEYYFFNVTNPEEFLAGKKASVQQIGPYTYREYRPRENVTFLENGTKI-YALNPKSFVFVPEKSAGDPEVDIITTVNIPY 142
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_005801042.1 (lysosome membrane protein 2-like isoform X1 [Xiphophorus maculatus]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-7 Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVR 273
L ++GIA ++ + F M +LK+++ +T +Q E+ W P + +F+N+TNP FLAG S + +GP+TYR+++ R +V F ++G+ V Y N K+ V P + G + I +N Y + S S VR
Sbjct: 18 LLIVGIALVVAQVFQTMINSRLKKEITLTEKSQMFES--W---KNPPPPVYMEYYFFNVTNPEEFLAGGKASVKQIGPYTYREYRPRENVTFLENGTKV-YALNPKSFVFVPEKSAGDPEVDIIRTVNIPYVAVMNEMNSYSFYVR 157
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_020499631.1 (lysosome membrane protein 2-like [Labrus bergylta]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-7 Identity = 44/156 (28.21%), Postives = 81/156 (51.92%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVRVGIPRVLNDV 283
L ++GIA ++ + F M +LK+++ +T +Q EA W P + +F+N+TNP FLAG S + +GP+TYR+++ R ++ F ++G+ + Y N K+ V P + G + I +N + + S S +R + +N +
Sbjct: 18 LLIVGIALVVAQVFQTMIHSRLKKEMTLTEKSQVFEA--W---KNPPPPVYMEYYFFNVTNPEVFLAGGKASVKQIGPYTYREYRPRENITFLENGTKI-YALNPKSFVFVPEKSAGDPEVDIIRTVNIPFVAVMNELNSYSFFLRTLVSMYMNSL 167
BLAST of NO05G00070 vs. NCBI_GenBank
Match: XP_023199309.1 (lysosome membrane protein 2-like isoform X2 [Xiphophorus maculatus]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-7 Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 0
Query: 128 LFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKN-VLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVR 273
L ++GIA ++ + F M +LK+++ +T +Q E+ W P + +F+N+TNP FLAG S + +GP+TYR+++ R +V F ++G+ V Y N K+ V P + G + I +N Y + S S VR
Sbjct: 18 LLIVGIALVVAQVFQTMINSRLKKEITLTEKSQMFES--W---KNPPPPVYMEYYFFNVTNPEEFLAGGKASVKQIGPYTYREYRPRENVTFLENGTKV-YALNPKSFVFVPEKSAGDPEVDIIRTVNIPYVAVMNEMNSYSFYVR 157 The following BLAST results are available for this feature:
BLAST of NO05G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00070 ID=NO05G00070|Name=NO05G00070|organism=Nannochloropsis oceanica|type=gene|length=7938bpback to top protein sequence of NO05G00070.3 >NO05G00070.3-protein ID=NO05G00070.3-protein|Name=NO05G00070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1035bpback to top protein sequence of NO05G00070.2 >NO05G00070.2-protein ID=NO05G00070.2-protein|Name=NO05G00070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=919bpback to top protein sequence of NO05G00070.1 >NO05G00070.1-protein ID=NO05G00070.1-protein|Name=NO05G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1056bpback to top Synonyms
Publications
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