NO05G00070.1, NO05G00070.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G00070.1
Unique NameNO05G00070.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3977
Alignment locationchr5:15788..23725 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:15788..23725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G00070.1 vs.
Match: EWM28404.1 (cd36-like class b scavenger receptor [Nannochloropsis gaditana])

HSP 1 Score: 1112.8 bits (2877), Expect = 0.000e+0
Identity = 613/1052 (58.27%), Postives = 746/1052 (70.91%), Query Frame = 0
Query:    5 MRNHAHKKRNEKAGFDVEEGDLRDESDITSNIGG----GTNLEGVELIDHHHHR-REIKEAFSDEDEESDEDDDECEDEDGEEYDDSDEDSDEEEDGRGGGGGKKKGKDAGGTWFTGYTLGWTWIGIGLFVLGIAGLLHKGFPEMYKRKLKEKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSFELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKNVLEPSLTVGGSDKVNIMGINTAYTTGVARKLSESNMVRVGIPRVLNDVRDKSLPQLAVDLRALT--VGGWNERPGDLATAAKGLQAAMGAEVFATTWAQGGFSKPETVDAIAKVLKVDAAEAAYIRGLLDTSKDLALPTAVAQRLWDPAVDASLVALNTPAANARKGLLLYAGPEAGRVALPTQLGDGATPTQVEDVAAYVRRILASPEVAVKVLDAVGMDKAKYPTLDDLAMRQFTMADVLSSLGGDPGALQGISLTQVKQGNTYVEEALVPGPVTEAVPMLELGYILRSAKTHPFLPAPPSLPAWVPPRAPRTVADLEAQGWGVTTKGKCIFDVVLSNQTYYENAILGVPAFKLEDEFTHLYARTASPLTLGGVQVCLAVGPMDDAGTRAPTPDWVDLQTYLNFIGKTAIEPLFRFAVINNNGGLVTTRTVQERVLGHQEPLLALSLGGDAPSARFALLPNAPGPLDG-HAFCTSAADVDHTLFGCFLDTEASTPSQNVYRKTPSRYATGKTTLSDLSQLQNYAGVGEDVPVMYPSGQQTAVVMPDAVAELSSTLPTLTHEQRAD-DVPPLLLPVNTSLSPSALQRGFTTGEQFPPFLLQDLPDPPPLWVLRLKGPIAFRFSYTNNTERHGITLRRFHLAQDLFHTRDDWPLVKDGEGE-GRRESTFMNLTLGTWMPTFIADSPLAGFRDSPTYAASSPLVVKRGKEMEGRSSFVDVEPTTGKTLSARMQAQVSVSTSSPLSGQYDTFYPEAYLGSFLPTVYMASETDLHAKDASTIRGALYTPGKVVKGLLLAAVPVGTIMCLWGLVLMGREFR 1047
            ++ H +   +E+AG+  EEG+          +GG        EGVELIDHHH +  ++K+     DE S+E+++E   ED  E DD DE+ +EEE     GG +K  + AGGTWF GYTLG TW+GIGL VL +AG+LHK FPE+YKRKL++KLVVT++AQA+E  GW G+S LHTP+H  +HFYNLTN A FL G +P+FELVGPFTYRQF+RRTDVVFA DGSYVD+T N+K VL+P LT GG+D  NI  INTAY TGVARKL+ESNMVR+G+PR+L+  RDK LPQL++D+RALT  + G  +   DL     G+ +   A+ +            ET D     L    A+A   RGLL  +   A   A+ + +    V A L         A    +L A     RV     L +   PT                      +DA+ M +             FTMADVL  LGG P ALQGISL QV QGN YVEE+L PGP TEAVPM+ELGYILRSAKTH FLPAPPSLP W+PP  PR+VA+L+AQGWG   KG+CIFDV+L+N+TY+ENA+LG+PAF LED+FTHL+A  +SPL LGGV+ CLAVGPM   GTRAPTPDW DLQTYLNF+GK++IEPLFRF VINNNGGLV+TRTV+E  LGHQEPLL LSLG DAPSA ++LL N  GPLD  HAFCTS+ADV+H L+GCFLDTEASTP+++VYRKTPSRYATGK  +SD+ QLQ YAG+  DVPVMYPSGQ+T V MPDAVAEL+S++P  T  +R   +  P    +N S SPSA+QRGF+TGEQFPPFLLQDLP PPPLWVLRLKGPI  RFSYTNNT+RHGI LRRF L+QDLF  RDD  L+  G GE   R+STFMN+TLGTWMPTF+ADSP AGF+  P +AASSP V+++ K MEG ++++DVEP TGK+LS R QAQ+S+STSSP SG YD FY EAY G FLPTV+M +ET L  +DAS IR ALYTPGKVV G++L+A+PVG IM L GLV++G+E R
Sbjct:    4 IKRHRNHSMDEEAGYGREEGN---------RLGGVRPDDQAKEGVELIDHHHSKISDLKDTHRAADESSEEEEEE---EDENEEDDDDEEEEEEE-----GGVRKGRRKAGGTWFKGYTLGLTWMGIGLVVLAVAGILHKAFPELYKRKLRDKLVVTSMAQAEETVGWLGDSSLHTPTHIGLHFYNLTNAADFLGGALPAFELVGPFTYRQFRRRTDVVFAPDGSYVDFTTNFKAVLQPELTFGGTDSWNITSINTAYATGVARKLAESNMVRIGVPRILSPFRDKGLPQLSLDIRALTAYIRGLLDTGKDL-----GISSTAAAQFW-----------NETQDFSLVALNTPEAQAR--RGLLLYTGSPAGRAAIPKEV---EVGAGLTDAQVDEVAAYVMRILSAPEVEARVLKAVGLDEAVYPT----------------------VDALVMRQ-------------FTMADVLGILGGAPEALQGISLPQVNQGNIYVEESLTPGPATEAVPMIELGYILRSAKTHAFLPAPPSLPTWLPPATPRSVAELKAQGWGDVVKGECIFDVLLTNRTYFENAVLGIPAFLLEDDFTHLHASMSSPLVLGGVEECLAVGPMLGDGTRAPTPDWADLQTYLNFVGKSSIEPLFRFIVINNNGGLVSTRTVKELALGHQEPLLTLSLGADAPSAFYSLLSNTEGPLDAPHAFCTSSADVNHALYGCFLDTEASTPTKSVYRKTPSRYATGKADISDVQQLQAYAGLTGDVPVMYPSGQRTPVAMPDAVAELASSIPLSTSLRRTQTETFPPPESINASYSPSAIQRGFSTGEQFPPFLLQDLPSPPPLWVLRLKGPIVIRFSYTNNTKRHGIPLRRFTLSQDLFEARDDLALIDVGAGELAVRQSTFMNVTLGTWMPTFMADSPSAGFQFMPAFAASSPQVLEQAKGMEG-TTYIDVEPMTGKSLSRRTQAQLSISTSSPGSGAYDLFYDEAYKGPFLPTVFMVTETFLDKRDASGIRAALYTPGKVVNGIILSAIPVGIIMFLLGLVVLGKEGR 981          
The following BLAST results are available for this feature:
BLAST of NO05G00070.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28404.10.000e+058.27cd36-like class b scavenger receptor [Nannochlorop... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00070NO05G00070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G00070.1NO05G00070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G00070.1.cds1NO05G00070.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds2NO05G00070.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds3NO05G00070.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds4NO05G00070.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds5NO05G00070.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds6NO05G00070.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds7NO05G00070.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds8NO05G00070.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds9NO05G00070.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds10NO05G00070.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds11NO05G00070.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds12NO05G00070.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds13NO05G00070.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds14NO05G00070.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds15NO05G00070.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds16NO05G00070.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds17NO05G00070.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds18NO05G00070.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds19NO05G00070.1.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds20NO05G00070.1.cds20Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds21NO05G00070.1.cds21Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds22NO05G00070.1.cds22Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds23NO05G00070.1.cds23Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00070.1.cds24NO05G00070.1.cds24Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G00070.1 ID=NO05G00070.1|Name=NO05G00070.1|organism=Nannochloropsis oceanica|type=mRNA|length=3977bp
CAGGCAGCACTGAACCTGACTTACGTCGAGCAGTGGGTGTGGACAAGGTG
CTATCATTTTTTCCCGTCCTCCCTGTCCAACAGCGGACTCGGCAGCAAGC
AAAAGTCTTGAAGCACGCAACAGCAGCCCCGGTCCGCCCTCGTCGGGCCC
CTTAAAGCCCTCCACTCCATCTAAGTGGCTCTTAGCGCGATGTTCAAGAG
TATGAGAAACCACGCGCACAAGAAGAGGAACGAGAAGGCGGGGTTTGACG
TCGAAGAGGGAGATCTGCGGGATGAAAGCGACATCACCAGCAACATAGGC
GGCGGTACAAACCTGGAGGGCGTCGAGCTGATCGACCACCATCACCATAG
ACGGGAAATAAAGGAGGCTTTCAGCGACGAGGATGAGGAGAGCGACGAGG
ATGACGACGAGTGCGAGGACGAGGATGGCGAGGAATACGATGACAGCGAC
GAGGACAGCGACGAGGAGGAAGACGGGCGGGGGGGAGGAGGAGGGAAGAA
GAAGGGGAAGGATGCGGGCGGGACCTGGTTCACGGGTTACACGCTGGGCT
GGACGTGGATAGGCATCGGGCTGTTTGTGCTGGGCATAGCTGGGTTGTTA
CACAAAGGTTTCCCCGAGATGTACAAGCGGAAGCTCAAGGAGAAGCTCGT
CGTTACCACTCTGGCGCAGGCGGACGAAGCGGCTGGGTGGTACGGGAATA
GCGGCCTGCACACACCGTCGCACAACATCATCCACTTCTACAACCTGACC
AACCCCGCCGCTTTCCTGGCCGGGGAGGTGCCCTCTTTTGAGCTCGTCGG
CCCCTTCACCTATCGGCAGTTTCAGCGGAGGACCGACGTGGTGTTTGCCA
AGGACGGGAGCTACGTCGACTACACGTTCAACTACAAGAACGTCCTCGAG
CCCTCTCTGACCGTTGGAGGGTCGGACAAGGTGAACATCATGGGCATCAA
CACCGCGTACACCACCGGGGTCGCCCGCAAGCTGTCTGAGAGCAATATGG
TCCGCGTCGGTATCCCCCGCGTGCTCAACGACGTGCGCGACAAGTCCCTG
CCCCAATTGGCTGTTGACCTCCGGGCCCTGACGGTGGGCGGGTGGAACGA
GCGGCCGGGGGATCTGGCCACGGCGGCCAAGGGGCTGCAGGCTGCGATGG
GGGCCGAGGTGTTTGCGACGACGTGGGCCCAAGGCGGCTTCAGCAAGCCC
GAGACAGTTGACGCCATCGCTAAGGTCCTCAAGGTCGACGCCGCGGAGGC
GGCCTACATCCGGGGCCTTCTGGACACGAGCAAAGACTTGGCCTTACCAA
CTGCCGTCGCTCAACGCCTCTGGGACCCGGCCGTTGACGCCTCCCTCGTC
GCGCTCAACACACCTGCGGCCAACGCCCGCAAAGGCCTCCTCCTCTACGC
AGGCCCCGAAGCCGGGAGAGTGGCCCTCCCCACCCAGCTGGGTGACGGAG
CGACGCCCACGCAAGTGGAAGACGTGGCGGCGTACGTCAGGCGCATTTTG
GCCTCACCGGAGGTGGCGGTCAAGGTGTTGGACGCGGTGGGCATGGACAA
GGCGAAATATCCCACGCTGGACGACCTGGCCATGCGTCAGTTTACCATGG
CCGACGTCCTAAGCTCGCTGGGCGGCGACCCGGGGGCCCTCCAAGGCATC
AGTCTGACTCAAGTCAAGCAGGGAAACACTTACGTGGAAGAGGCCCTCGT
GCCCGGCCCTGTCACCGAGGCCGTGCCTATGCTCGAACTAGGCTACATCC
TCCGCTCCGCCAAGACGCACCCCTTCCTCCCTGCCCCTCCCTCCCTACCG
GCCTGGGTTCCGCCCCGCGCTCCCAGGACGGTGGCGGATCTGGAAGCTCA
GGGGTGGGGCGTGACCACCAAAGGGAAATGCATCTTCGATGTGGTTCTCT
CCAACCAGACCTACTACGAGAATGCCATCCTGGGCGTGCCAGCCTTCAAG
CTCGAGGACGAGTTCACTCATCTCTACGCCCGAACAGCCTCGCCACTGAC
CTTGGGAGGCGTCCAAGTCTGCCTGGCCGTGGGACCCATGGACGATGCGG
GAACTCGCGCTCCCACGCCGGATTGGGTCGATTTGCAGACCTACCTGAAT
TTCATCGGCAAAACGGCCATCGAGCCTCTCTTTCGATTCGCCGTCATCAA
CAACAACGGCGGCCTCGTCACCACACGGACTGTCCAGGAAAGGGTGCTGG
GCCATCAAGAGCCGCTCTTGGCGCTATCGCTAGGCGGCGACGCCCCCTCC
GCACGCTTCGCCCTCCTCCCCAACGCCCCCGGCCCCCTGGACGGTCACGC
CTTCTGCACCTCCGCCGCAGACGTGGATCACACGCTCTTCGGCTGCTTCC
TGGACACCGAGGCCTCGACCCCCTCACAGAACGTCTACCGGAAGACCCCA
AGCCGCTATGCCACAGGCAAGACGACCCTCAGCGATTTGAGTCAGCTTCA
GAACTACGCCGGCGTGGGGGAAGACGTGCCTGTGATGTACCCCTCGGGCC
AACAGACGGCCGTAGTGATGCCGGACGCAGTGGCCGAACTATCCTCTACC
CTCCCTACTTTGACACATGAGCAGCGGGCGGATGATGTCCCCCCTCTCCT
CCTTCCCGTCAATACCTCCCTTTCCCCCTCTGCCCTTCAGAGAGGCTTCA
CCACAGGCGAGCAGTTTCCACCCTTTCTCCTCCAGGATTTGCCCGACCCG
CCTCCCCTGTGGGTCCTCCGCCTCAAGGGCCCAATTGCGTTCCGCTTCTC
CTACACTAATAACACCGAGCGTCACGGCATCACCCTCCGTCGCTTTCATC
TCGCCCAGGACCTTTTCCATACCCGTGACGACTGGCCGCTGGTGAAGGAT
GGCGAGGGGGAGGGACGGAGGGAGAGCACCTTTATGAACCTGACCCTGGG
AACGTGGATGCCCACGTTTATTGCCGACTCTCCCCTGGCTGGCTTCCGGG
ACTCTCCAACCTATGCCGCTTCATCCCCGCTGGTGGTGAAGAGGGGGAAG
GAAATGGAAGGCAGATCATCGTTTGTGGACGTGGAGCCCACGACAGGGAA
AACCCTGTCAGCGCGCATGCAGGCGCAGGTCTCGGTCTCCACCTCCTCCC
CCCTCTCGGGGCAATACGACACGTTTTACCCGGAGGCTTATCTGGGATCC
TTCCTCCCCACCGTCTACATGGCCTCTGAAACCGACCTCCACGCCAAGGA
TGCCTCCACCATCCGGGGCGCGCTCTATACACCAGGTAAGGTGGTGAAGG
GCTTGCTTCTGGCGGCGGTACCCGTGGGGACCATCATGTGCCTGTGGGGG
CTGGTGCTCATGGGAAGGGAGTTTAGAAGAAGAAGGAGGAACGGACGGGC
AAAATAAGGAGGGAGAGAGAAAGGAAGGAAGGGTGTACAACAGCCTGGAT
GTAATGTATGAAATGGAAATAGAGGAGCAGGAAAGAAGGCAGGGTCTGTA
AGTCATTCTGAAATGGAAGTAAAGGCTGGTAATAGATAGACGGGATATGC
AATGACCACTCGAGGACGAGTGAGTGCAGCGTGCCGAGACGTGCACAAGC
AAGGTTGCCTGCATCATTTTTGAAAGAAAAAGAGAGAAATAGGATGTGAT
AAGGGACGAGGGAAGAAGAAAGCTTAGGTAGACTAGACAAGAACTACAAA
TACCAAATATTTTCTCATGGAGAAGGCGACACCTGAAAATTATATCTCCA
ATGCCTATGGAAAAACACGTGTTTTTTACCCTTGTATGACATGCACCGGC
CGGCCGAGGTAAAGAAAGAGACAACGCGGAAAATTAGCACAGAAAGAGCT
AAATATGAGGACTGGTCGTTCATTGAACCAAGAATAAGAAAGGGCGTCTA
TGGATGGGCGAGAAGAGGATAGAATAACTTGTTCAAGATGGAAGTACTTT
ACTTTTAACAAATCAAAATTGAGGGAGAGGTTTTCAGGCCTTCATTTGTT
TTCTCCCTTTTTCGTTCTCTCCTCTTC
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protein sequence of NO05G00070.1

>NO05G00070.1-protein ID=NO05G00070.1-protein|Name=NO05G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1056bp
MFKSMRNHAHKKRNEKAGFDVEEGDLRDESDITSNIGGGTNLEGVELIDH
HHHRREIKEAFSDEDEESDEDDDECEDEDGEEYDDSDEDSDEEEDGRGGG
GGKKKGKDAGGTWFTGYTLGWTWIGIGLFVLGIAGLLHKGFPEMYKRKLK
EKLVVTTLAQADEAAGWYGNSGLHTPSHNIIHFYNLTNPAAFLAGEVPSF
ELVGPFTYRQFQRRTDVVFAKDGSYVDYTFNYKNVLEPSLTVGGSDKVNI
MGINTAYTTGVARKLSESNMVRVGIPRVLNDVRDKSLPQLAVDLRALTVG
GWNERPGDLATAAKGLQAAMGAEVFATTWAQGGFSKPETVDAIAKVLKVD
AAEAAYIRGLLDTSKDLALPTAVAQRLWDPAVDASLVALNTPAANARKGL
LLYAGPEAGRVALPTQLGDGATPTQVEDVAAYVRRILASPEVAVKVLDAV
GMDKAKYPTLDDLAMRQFTMADVLSSLGGDPGALQGISLTQVKQGNTYVE
EALVPGPVTEAVPMLELGYILRSAKTHPFLPAPPSLPAWVPPRAPRTVAD
LEAQGWGVTTKGKCIFDVVLSNQTYYENAILGVPAFKLEDEFTHLYARTA
SPLTLGGVQVCLAVGPMDDAGTRAPTPDWVDLQTYLNFIGKTAIEPLFRF
AVINNNGGLVTTRTVQERVLGHQEPLLALSLGGDAPSARFALLPNAPGPL
DGHAFCTSAADVDHTLFGCFLDTEASTPSQNVYRKTPSRYATGKTTLSDL
SQLQNYAGVGEDVPVMYPSGQQTAVVMPDAVAELSSTLPTLTHEQRADDV
PPLLLPVNTSLSPSALQRGFTTGEQFPPFLLQDLPDPPPLWVLRLKGPIA
FRFSYTNNTERHGITLRRFHLAQDLFHTRDDWPLVKDGEGEGRRESTFMN
LTLGTWMPTFIADSPLAGFRDSPTYAASSPLVVKRGKEMEGRSSFVDVEP
TTGKTLSARMQAQVSVSTSSPLSGQYDTFYPEAYLGSFLPTVYMASETDL
HAKDASTIRGALYTPGKVVKGLLLAAVPVGTIMCLWGLVLMGREFRRRRR
NGRAK*
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mRNA from alignment at chr5:15788..23725-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G00070.1 ID=NO05G00070.1|Name=NO05G00070.1|organism=Nannochloropsis oceanica|type=mRNA|length=7938bp|location=Sequence derived from alignment at chr5:15788..23725- (Nannochloropsis oceanica)
CAGGCAGCACTGAACCTGACTTACGTCGAGCAGTGGGTGTGGACAAGGTG CTATCATTTTTTCCCGTCCTCCCTGTCCAACAGCGGACTCGGCAGCAAGC AAAAGTCTTGAAGCACGCAACAGCAGCCCCGGTCCGCCCTCGTCGGGCCC CTTAAAGCCCTCCACTCCATCTAAGTGGCTCTTAGCGCGATGTTCAAGAG TATGAGAAACCACGCGCACAAGAAGAGGAACGAGAAGGCGGGGTTTGACG TCGAAGAGGGAGATCTGCGGGATGAAAGCGACATCACCAGCAACATAGGC GGCGGTACAAACCTGGAGGGCGTCGAGCTGATCGACCACCATCACCATAG ACGGGAAATAAAGGTACGTCAGATGTTGGAGGGGTGTTCTTATGCTTTGA TAGTTGGTAGAAGGAAGGAAGGCAAGGGTATGAGGACAGAAGAGCGGTAT CTCGCATTGCTATATGATACGCGTGTGTGTAGTAGTGATGACAAAGACCG GAGAGAATCACAACACCCCTTCAGAGACGGCTGTCCAGGGAGGTAATGTT GGAAATTAGAATCAAGAATCAATGTGCCTTGACTCAACGAAGCCTGGAAC AAGAGCAAAGGGTGCGCGTGAAAGAGATGGGTGCTTCCTCAACGGACAGG GGCTTATGCTTCTTACACGCACACGCCCTACAGGAGGCTTTCAGCGACGA GGATGAGGAGAGCGACGAGGATGACGACGAGTGCGAGGACGAGGATGGCG AGGAATACGATGACAGCGACGAGGACAGCGACGAGGAGGAAGACGGGCGG GGGGGAGGAGGAGGGAAGAAGAAGGGGAAGGATGCGGGCGGGACCTGGTT CACGGGTTACACGTACGTCCAAGAGGGAGGGAGTGAAGGAGGGAGGGAGG GAGGGAGGAAGGGAGGAAGTAAAGAAGCATTGAAGAGCAAGCGATAGCAA TTCATGAGGTCAGGGGCTGAAAAAGACCTGAATCCCTGCCGCTGTGTCGA GCTAATCCATTCCTCCTTCCCCCCCTCCCCCCTCCCTCCCTCCCTCCCTC CCTCCCTCCCTCCCTCCCTCATTCTTATCTTTCTGGCAGGCTGGGCTGGA CGTGGATAGGCATCGGGCTGTTTGTGCTGGGCATAGCTGGGTTGTTACAC AAAGGTTTCCCCGAGATGTACAAGCGGAAGCTCAAGGAGAAGCTCGTCGT TACCACTCTGGCGCAGGTAGGACGGTTGGTTGAAGGAGGGAGGGAGGAAG GGAGGGAGGGAGGGTTTTCGATGGAGCGACATACTTTCTGTCACACCACA TGCCCTTATACCCTCTTATCCCACCCTCCCTCCCTCCCGCCCGCCCTCCC TCCCGCCCTCGACAGGCGGACGAAGCGGCTGGGTGGTACGGGAATAGCGG CCTGCACACACCGTCGCACAACATCATCCACTTCTACAACCTGACCAACC CCGCCGCTTTCCTGGCCGGGGAGGTGCCCTCTTTTGAGCTCGTCGGTGAG TCTAGAGGGAGGGCGGGAGGGAGGGAGGGAGAGAGGAAAGGAGACTGGGG CCTTTTGTTTCGGCGGCCTCATTGAGCTGTCTGCTCATCACTCCCGCCTT CCCTCCCTCTCTCCCTCCCTGCCTTTCCCAGGCCCCTTCACCTATCGGCA GTTTCAGCGGAGGACCGACGTGGTGTTTGCCAAGGACGGGAGCTACGTCG ACTACACGTTCAACTACAAGAACGTCCTCGAGCCCTCTCTGACCGTTGGA GGTGCGTCCTCCCTCCCTCCTGCTCTCCTTGTCTCCATACATTTGCTGCT CCTAAGAGCTTGGCCCTCCTTCGCGCCATTTTCCAGTGCTTTGGCGCCAG CCTCTCTTCAAACAGAACTCAATTCTCTCACCCTCCCTCCCTCTCCCCCT CCCTCGGCACGGAAATAATGGGCGTCAACACCGAAACCGCCAACATATCA TCCTCCATTATCCTCTCTCCATGCCGCTGACGCCCTCCCCACCTCCCCCC TCCCCCCCGCCCCCCTCTCTAGGGTCGGACAAGGTGAACATCATGGGCAT CAACACCGCGTACACCACCGGGGTCGCCCGCAAGCTGTCTGAGAGCAATA TGGTCCGCGTCGGTGAGTGCTCAGGGAGGGAGGGAGGGAGGGCAGGAGGG AGAGTTGACAAAAGAAACGATAGTCACCTTCCCTCCCTCCCTCCCTCCCT CCCTCCCTCCCTCCCTCCTCCCGCCCAGGTATCCCCCGCGTGCTCAACGA CGTGCGCGACAAGTCCCTGCCCCAATTGGCTGTTGACCTCCGGGCCCTGA CGGTGGGCGGGTGGAACGAGCGGCCGGGGGATCTGGCCACGGCGGCCAAG GGGCTGCAGGCTGCGATGGGGGGTAAGGGACCGAGGGAAGGACCGAAGGA GGGAGGGAGGGAAAAGAGGCTATATAAAGTTAGCAAGACGACACGTCTCA CTTTTAACCCCTCCCTCCCTCCCCTCCCTCTTTCCCTCCCTTTTCCCGTC TGACTTTCCAAAAGCCGAGGTGTTTGCGACGACGTGGGCCCAAGGCGGCT TCAGCAAGCCCGAGACAGTTGACGCCATCGCTAAGGTCCTCAAGGTCGAC GCCGCGGAGGCGGTACGTGCCATTTGACTCGGTGGATAAAGGGGAGGCGA GAGAGATGGAAGCCATCGTAATTGGAAGGAGGGGAATGAGTGGAGATATG TTACCGAACCGATATGGTTGTGTATATCTGGAATAACCTTGTGATGGCCA CTCATCCAGCAAGTCCTCCCTCCCTCCGTCCTTTCCTCCCTCCCTCCCTC CCTCCCTCCCTCCCTCTTTCGCCCCAGGCCTACATCCGGGGCCTTCTGGA CACGAGCAAAGACTTGGCCTTACCAACTGCCGTCGCTCAACGCCTCTGGG ACCCGGCCGTTGACGCCTCCCTCGTCGCGCTCAACACACCGTACGTCCTC CCTCCCTCCCTCCCTCCCTCCCTCCTTCCTCATTTCTCTCTAACGCCTTT CCTCTTATCTGTCCCCTCCGCTCTCTCCCCTTGTCCCTCACTCAGTGCGG CCAACGCCCGCAAAGGCCTCCTCCTCTACGCAGGCCCCGAAGCCGGGAGA GTGGCCCTCCCCACCCAGCTGGGTGACGGAGCGACGCCCACGCAAGTGGA AGACGTGGCGGCGTACGTCAGGCGCATTTTGGCCTCACCGGAGGTAGGTA GACAACGGCCTCCCGCTTCCCTCTCCCTCCCTCCCTCTTTCCCTCCCTCG CTCTTCCCTCTCCTGATGCTCACGCACTCAGCTCCGCTTCTCACTCGTCG GCCCCTTCATCTTCCCTCCTTCCCTCCCTTCCTCCTTCCCTCCCGTGCAG GTGGCGGTCAAGGTGTTGGACGCGGTGGGCATGGACAAGGCGAAATATCC CACGCTGGACGACCTGGCCATGCGTCAGGTGGGGGACGGAGGGAGGGCGG GCGGGCGGGATGGAGGAAGGAAGGGGTTAGGAGAGGGCAAGAAGGGCGAG CACACCTATCGGAAACATGCATTGCAGCCAGTGGACCACAGAAAGACGGC AGGGGGGAAGGCGAGGCCTGATATTTTGATGTTGTCGAGTCTTCCCCCGC TCTTTCCCATATCCATCCCCTCTCACACTCACCCCTATCCCACACCCCAT CTCGTATAAACCACATAATTGACTCACATATGCCCCTCGTTCTGTCCCCG CAGTTTACCATGGCCGACGTCCTAAGCTCGCTGGGCGGCGACCCGGGGGC CCTCCAAGGCATCAGTCTGACTCAAGTCAAGCAGGGAAACACTTACGTGG AAGAGGCCCTCGTGCCCGGCCCTGGTACGTCCTCCCTTCCTCCCTTTCTT CCTTCCTCCCTCCCTTGCCTCTGTACGTCTCCTCCTTCTTATCCCACTCC CCTCCTCCCCTCCTCCCTCCCTCCCTCCCTTGAGTCACCGAGGCCGTGCC TATGCTCGAACTAGGCTACATCCTCCGCTCCGCCAAGACGCACCCCTTCC TCCCTGCCCCTCCCTCCCTACCGGCCTGGGTTCCGCCCCGCGCTCCCAGG ACGGTGGCGGATCTGGAAGCTCAGGGGTGGGGCGTGACCACCAAAGGTAA CCATCGAAGAAGGGAGGAAAGGAGGGAGGGGCGGAGGGTGAAGACGAGGG CCTTGGCTTCGCACGTGTGTTTTCACCTTCCCTCCCTCTCCCCTTCCCTT CCTCCGTCCCTTCCTCCTTTCGCCCCTTCCCACCTTGCAGGGAAATGCAT CTTCGATGTGGTTCTCTCCAACCAGACCTACTACGAGAATGCCATCCTGG GCGTGCCAGCCTTCAAGCTCGAGGACGAGTTCACTCATCTCTACGCCCGA ACAGTACGTACCACCCCCCCTCCCCTCCCTCTCTCCCGCGCGTGCTCTCA TCCACCTACCCGGGCCTCCCTTTGACGTTCCCTGCCTCTCTCCCTCCCTC TCCAGGCCTCGCCACTGACCTTGGGAGGCGTCCAAGTCTGCCTGGCCGTG GGACCCATGGACGATGCGGGAACTCGCGCTCCCACGCCGGATTGGGTCGA TTTGCAGGTCGAGAGGGAGGGAAGGAAGGAGGGAGCGAGGGCGGGCGGGA TGGAGGAAAAGGCACTGGATTGAGAGGGCGCTCATATCCTCTGTCCGGAG TTGACAGATGTACAGAGAGGGCAAGATGAGAAGGCAAAGAGGAGGGGGGA GGAAAGCTAGGCGCCCTTGTCCTCGCTTCCCTTTTGCTTCACCCTTCCTC CCTCCCTCCCCTCCCACCCTCTAGACCTACCTGAATTTCATCGGCAAAAC GGCCATCGAGCCTCTCTTTCGATTCGCCGTCATCAACAACAACGGCGGCC TCGTCACCACACGGACTGTCCAGGAAAGGGTGCTGGGCCATCAAGAGCCG CTCTTGGCGCTATCGCTAGGCAAGGAGGGAGGGGCAGACGGAGGGAGGCT GCACTGAAGGACCGACGCAGGGACTCTCTCACTGACCAGGTTTTCCTCCC TCCCTTTTGTCCCTTTCACCCCTCCCTCCCTCCCTCTCTACCTTCTCTCT CTTCCAGGCGGCGACGCCCCCTCCGCACGCTTCGCCCTCCTCCCCAACGC CCCCGGCCCCCTGGACGGTCACGCCTTCTGCACCTCCGCCGCAGACGTGG ATCACACGCTCTTCGGCTGCTTCCTGGACACCGAGGCCTCGACCCCCTCA CAGAACGTCTACCGGAAGGTAAACAGCCCTCCCTCCCTCCCTCCCTCCCT CTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC CTCCCTATCTCCTATTGTCGCTTTTTCTCCCCTTCAAGATTCCATGCGGT GCGCTGCAGCCGAAATCAACCTCAACACGGCTACGTCTCCCCCTCTCCTT CCCTCGCTCCCTCCCTCCCTTCCTAGACCCCAAGCCGCTATGCCACAGGC AAGACGACCCTCAGCGATTTGAGTCAGCTTCAGAACTACGCCGGCGTGGG GGAAGACGTGCCTGTGATGTACCCCTCGGGCCAACAGACGGCCGTAGTGG TGAGGGAGGGAGGGAAGACGGGAGGGAGGGAGGGTGGGAACCAGAAGAAG AGATCTTGGGAGTATCCAGTCGTCGCAGTGGCATCTTGTCTCATACCTCT TCCTCTTTTTCCTCCCTTCCTCTCTATTTTCCCCCCTCCCTCCCCACCTC CTGCTCTTCCTCCCTTTCTCTCTTCCCTCCCCTTCTTCCTTCCCAGATGC CGGACGCAGTGGCCGAACTATCCTCTACCCTCCCTACTTTGACACATGAG CAGCGGGCGGATGATGTCCCCCCTCTCCTCCTTCCCGTCAATACCTCCCT TTCCCCCTCTGCCCTTCAGAGAGGCTTCACCACAGGCGAGCAGTTTCCAC CCTTTCTCCTCCAGGTGGGGTCCGAGGGAGGGAAGGAGGCGGGGAGGGAG GAAAGGAGTGAGGGAGGGAGGGAGGGGGGCACAAGAGAAGACGAAGGTGG ACGTGTTCATTGTCTGACAAGTCTGAAGGAAATGGAGAGGGAGGGAGAGA GAGAAGGAAGGGGGACACCGTAAGACACCCGGATCTCTCACGACTCCTCT CTTATCGCTGGCTTTATGGTATCCCGCAGGATTTGCCCGACCCGCCTCCC CTGTGGGTCCTCCGCCTCAAGGGCCCAATTGCGTTCCGCTTCTCCTACAC TAATAACACCGAGGTGGGCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC TCCCGTCATTCTGCTCACCCTCCTTCCCTCCGTCGCATCCTCCCTTTCCC TCCACTCCCTTCCTTTCTAGCGTCACGGCATCACCCTCCGTCGCTTTCAT CTCGCCCAGGACCTTTTCCATACCCGTGACGACTGGCCGCTGGTGAAGGA TGGCGAGGGGGAGGGACGGAGGGAGAGCACCTTTATGAACCTGACCCTGG GAACGTGGATGCCCACGGTACGTAGAGGAAGGGAGGACAGGAGGTAAGAG GAGAGCAATAGCTGCAACCTCGCTTCGTCTTCTCATGCATCAGAGCTGCG CCCCTCTTACCGAGACCTGCCCTTCATTTCCTCCCTCTCTCCCCTCTCCC TAATTCTTGAGTTTATTGCCGACTCTCCCCTGGCTGGCTTCCGGGACTCT CCAACCTATGCCGCTTCATCCCCGCTGGTGGTGAAGAGGGGGAAGGAAAT GGAAGGCAGATCATCGTTTGTGGACGTGGAGCCCACGACAGGTGAGTGCA AGGGAGGGAAAGATGGAGGGTGGGAAGGAGGGCGTAGAGCACTCGTGTCA ACAGTCTGCATCCTCACCATCCTTCCCTTCCTCCCTCCCTCCCTCTGTTT CTTTCCCCCTTCATTCCCAGGGAAAACCCTGTCAGCGCGCATGCAGGCGC AGGTCTCGGTCTCCACCTCCTCCCCCCTCTCGGGGCAATACGACACGTTT TACCCGGAGGCTTATCTGGGATCCTTCCTCCCCACCGTCTACATGGCCTC TGAAACCGACCTCCACGCCAAGGATGCCTCCACCATCCGGGGCGCGCTCT ATACACCAGGTATACTCGTGTCCACGTCCGCGTCTTTCTCCTCTACTCCT GCTCTCTCACTCTTTTGACAATCTTCTCATTTTCCCCTCCATCCCTCCTT CCCTCCCTCCCTCCCTCCCTCCCTTCTTCCTCCCTTCCTCTTCCAGGTAA GGTGGTGAAGGGCTTGCTTCTGGCGGCGGTACCCGTGGGGACCATCATGT GCCTGTGGGGGCTGGTGCTCATGGGAAGGGAGTTTAGAAGAAGAAGGAGG AACGGACGGGCAAAATAAGGAGGGAGAGAGAAAGGAAGGAAGGGTGTACA ACAGCCTGGATGTAATGTATGAAATGGAAATAGAGGAGCAGGAAAGAAGG CAGGGTCTGTAAGTCATTCTGAAATGGAAGTAAAGGCTGGTAATAGATAG ACGGGATATGCAATGACCACTCGAGGACGAGTGAGTGCAGCGTGCCGAGA CGTGCACAAGCAAGGTTGCCTGCATCATTTTTGAAAGAAAAAGAGAGAAA TAGGATGTGATAAGGGACGAGGGAAGAAGAAAGCTTAGGTAGACTAGACA AGAACTACAAATACCAAATATTTTCTCATGGAGAAGGCGACACCTGAAAA TTATATCTCCAATGCCTATGGAAAAACACGTGTTTTTTACCCTTGTATGA CATGCACCGGCCGGCCGAGGTAAAGAAAGAGACAACGCGGAAAATTAGCA CAGAAAGAGCTAAATATGAGGACTGGTCGTTCATTGAACCAAGAATAAGA AAGGGCGTCTATGGATGGGCGAGAAGAGGATAGAATAACTTGTTCAAGAT GGAAGTACTTTACTTTTAACAAATCAAAATTGAGGGAGAGGTTTTCAGGC CTTCATTTGTTTTCTCCCTTTTTCGTTCTCTCCTCTTC
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Coding sequence (CDS) from alignment at chr5:15788..23725-

>NO05G00070.1 ID=NO05G00070.1|Name=NO05G00070.1|organism=Nannochloropsis oceanica|type=CDS|length=3168bp|location=Sequence derived from alignment at chr5:15788..23725- (Nannochloropsis oceanica)
ATGTTCAAGAGTATGAGAAACCACGCGCACAAGAAGAGGAACGAGAAGGC
GGGGTTTGACGTCGAAGAGGGAGATCTGCGGGATGAAAGCGACATCACCA
GCAACATAGGCGGCGGTACAAACCTGGAGGGCGTCGAGCTGATCGACCAC
CATCACCATAGACGGGAAATAAAGGAGGCTTTCAGCGACGAGGATGAGGA
GAGCGACGAGGATGACGACGAGTGCGAGGACGAGGATGGCGAGGAATACG
ATGACAGCGACGAGGACAGCGACGAGGAGGAAGACGGGCGGGGGGGAGGA
GGAGGGAAGAAGAAGGGGAAGGATGCGGGCGGGACCTGGTTCACGGGTTA
CACGCTGGGCTGGACGTGGATAGGCATCGGGCTGTTTGTGCTGGGCATAG
CTGGGTTGTTACACAAAGGTTTCCCCGAGATGTACAAGCGGAAGCTCAAG
GAGAAGCTCGTCGTTACCACTCTGGCGCAGGCGGACGAAGCGGCTGGGTG
GTACGGGAATAGCGGCCTGCACACACCGTCGCACAACATCATCCACTTCT
ACAACCTGACCAACCCCGCCGCTTTCCTGGCCGGGGAGGTGCCCTCTTTT
GAGCTCGTCGGCCCCTTCACCTATCGGCAGTTTCAGCGGAGGACCGACGT
GGTGTTTGCCAAGGACGGGAGCTACGTCGACTACACGTTCAACTACAAGA
ACGTCCTCGAGCCCTCTCTGACCGTTGGAGGGTCGGACAAGGTGAACATC
ATGGGCATCAACACCGCGTACACCACCGGGGTCGCCCGCAAGCTGTCTGA
GAGCAATATGGTCCGCGTCGGTATCCCCCGCGTGCTCAACGACGTGCGCG
ACAAGTCCCTGCCCCAATTGGCTGTTGACCTCCGGGCCCTGACGGTGGGC
GGGTGGAACGAGCGGCCGGGGGATCTGGCCACGGCGGCCAAGGGGCTGCA
GGCTGCGATGGGGGCCGAGGTGTTTGCGACGACGTGGGCCCAAGGCGGCT
TCAGCAAGCCCGAGACAGTTGACGCCATCGCTAAGGTCCTCAAGGTCGAC
GCCGCGGAGGCGGCCTACATCCGGGGCCTTCTGGACACGAGCAAAGACTT
GGCCTTACCAACTGCCGTCGCTCAACGCCTCTGGGACCCGGCCGTTGACG
CCTCCCTCGTCGCGCTCAACACACCTGCGGCCAACGCCCGCAAAGGCCTC
CTCCTCTACGCAGGCCCCGAAGCCGGGAGAGTGGCCCTCCCCACCCAGCT
GGGTGACGGAGCGACGCCCACGCAAGTGGAAGACGTGGCGGCGTACGTCA
GGCGCATTTTGGCCTCACCGGAGGTGGCGGTCAAGGTGTTGGACGCGGTG
GGCATGGACAAGGCGAAATATCCCACGCTGGACGACCTGGCCATGCGTCA
GTTTACCATGGCCGACGTCCTAAGCTCGCTGGGCGGCGACCCGGGGGCCC
TCCAAGGCATCAGTCTGACTCAAGTCAAGCAGGGAAACACTTACGTGGAA
GAGGCCCTCGTGCCCGGCCCTGTCACCGAGGCCGTGCCTATGCTCGAACT
AGGCTACATCCTCCGCTCCGCCAAGACGCACCCCTTCCTCCCTGCCCCTC
CCTCCCTACCGGCCTGGGTTCCGCCCCGCGCTCCCAGGACGGTGGCGGAT
CTGGAAGCTCAGGGGTGGGGCGTGACCACCAAAGGGAAATGCATCTTCGA
TGTGGTTCTCTCCAACCAGACCTACTACGAGAATGCCATCCTGGGCGTGC
CAGCCTTCAAGCTCGAGGACGAGTTCACTCATCTCTACGCCCGAACAGCC
TCGCCACTGACCTTGGGAGGCGTCCAAGTCTGCCTGGCCGTGGGACCCAT
GGACGATGCGGGAACTCGCGCTCCCACGCCGGATTGGGTCGATTTGCAGA
CCTACCTGAATTTCATCGGCAAAACGGCCATCGAGCCTCTCTTTCGATTC
GCCGTCATCAACAACAACGGCGGCCTCGTCACCACACGGACTGTCCAGGA
AAGGGTGCTGGGCCATCAAGAGCCGCTCTTGGCGCTATCGCTAGGCGGCG
ACGCCCCCTCCGCACGCTTCGCCCTCCTCCCCAACGCCCCCGGCCCCCTG
GACGGTCACGCCTTCTGCACCTCCGCCGCAGACGTGGATCACACGCTCTT
CGGCTGCTTCCTGGACACCGAGGCCTCGACCCCCTCACAGAACGTCTACC
GGAAGACCCCAAGCCGCTATGCCACAGGCAAGACGACCCTCAGCGATTTG
AGTCAGCTTCAGAACTACGCCGGCGTGGGGGAAGACGTGCCTGTGATGTA
CCCCTCGGGCCAACAGACGGCCGTAGTGATGCCGGACGCAGTGGCCGAAC
TATCCTCTACCCTCCCTACTTTGACACATGAGCAGCGGGCGGATGATGTC
CCCCCTCTCCTCCTTCCCGTCAATACCTCCCTTTCCCCCTCTGCCCTTCA
GAGAGGCTTCACCACAGGCGAGCAGTTTCCACCCTTTCTCCTCCAGGATT
TGCCCGACCCGCCTCCCCTGTGGGTCCTCCGCCTCAAGGGCCCAATTGCG
TTCCGCTTCTCCTACACTAATAACACCGAGCGTCACGGCATCACCCTCCG
TCGCTTTCATCTCGCCCAGGACCTTTTCCATACCCGTGACGACTGGCCGC
TGGTGAAGGATGGCGAGGGGGAGGGACGGAGGGAGAGCACCTTTATGAAC
CTGACCCTGGGAACGTGGATGCCCACGTTTATTGCCGACTCTCCCCTGGC
TGGCTTCCGGGACTCTCCAACCTATGCCGCTTCATCCCCGCTGGTGGTGA
AGAGGGGGAAGGAAATGGAAGGCAGATCATCGTTTGTGGACGTGGAGCCC
ACGACAGGGAAAACCCTGTCAGCGCGCATGCAGGCGCAGGTCTCGGTCTC
CACCTCCTCCCCCCTCTCGGGGCAATACGACACGTTTTACCCGGAGGCTT
ATCTGGGATCCTTCCTCCCCACCGTCTACATGGCCTCTGAAACCGACCTC
CACGCCAAGGATGCCTCCACCATCCGGGGCGCGCTCTATACACCAGGTAA
GGTGGTGAAGGGCTTGCTTCTGGCGGCGGTACCCGTGGGGACCATCATGT
GCCTGTGGGGGCTGGTGCTCATGGGAAGGGAGTTTAGAAGAAGAAGGAGG
AACGGACGGGCAAAATAA
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Synonyms
Publications