NO04G04860, NO04G04860 (gene) Nannochloropsis oceanica

Overview
NameNO04G04860
Unique NameNO04G04860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5674
Alignment locationchr4:1327447..1333120 -

Link to JBrowse

Properties
Property NameValue
DescriptionLactase-phlorizin hydrolase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1327447..1333120 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
GO:0009056catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001360Glyco_hydro_1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G04860 vs. NCBI_GenBank
Match: EWM28877.1 (lactase-phlorizin hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 906.7 bits (2342), Expect = 4.300e-260
Identity = 422/551 (76.59%), Postives = 474/551 (86.03%), Query Frame = 0
Query:    1 MADRSLTTGMRTQRGEWFRSVAPPVVVVCALAGLASGLYIFLGTNPFVYRVPPSVEG--TGKPSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMTRFSP 550
            MAD   T  M +QR  W R+V  PV +V +L  +A  +Y  LG+   +YR P S     +GK SMQC +YQDP DPTS INMP KEVF S  T+FP+ FAWG ATSAYQIEGAWDEDGRG SIWDTF+HTKGKVE N+NGDVACDHYHLYKEDVA+MK LGI +YRFSISW RI+P GTGNVNFKGLE+YS LVDELLANGIEPY TLYHWDLP+ LQ++H GW+S VTSDAFAEYAD+VF+ LGDRVKYWITLNEPWCSALLGYGIGVHAPGIK+IKSGAYLAGH+LLLAHSKAVK+Y+ KYQ  QGGKIGITINSD+KQ  C+ + DK AAERSQIFVMGWFADPVF GDYPEEMRKTCGDRLPSFT EEKA+L+GSLDFLGLNHYTTALV+ PLFR + GNYYTDMGTMDSSDKSWPVGESGWLKDVPWG RKLLVWI+ RY+DP+IYITENGVSGP E  VK D+EGL+DTFRQ+FMQGYI E+YKAI +DKV V GYFYW+LMDNFEWADG+RPRFG++RVNFTSQAR+PKES+ MY++MM R +P
Sbjct:    1 MADE--TQLMPSQRRGWLRNVFAPVTLVTSLVAVAVAVYFVLGSKSLIYRRPGSSSSLESGKTSMQCKVYQDPADPTSTINMPSKEVFASNLTQFPSGFAWGAATSAYQIEGAWDEDGRGLSIWDTFSHTKGKVENNENGDVACDHYHLYKEDVAVMKALGITNYRFSISWPRILPSGTGNVNFKGLEFYSDLVDELLANGIEPYATLYHWDLPQALQDKHDGWYSPVTSDAFAEYADVVFDALGDRVKYWITLNEPWCSALLGYGIGVHAPGIKDIKSGAYLAGHHLLLAHSKAVKLYREKYQVLQGGKIGITINSDFKQYYCDNTLDKAAAERSQIFVMGWFADPVFLGDYPEEMRKTCGDRLPSFTEEEKADLKGSLDFLGLNHYTTALVASPLFRTNGGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGLRKLLVWIQNRYDDPLIYITENGVSGPGESSVKKDSEGLDDTFRQSFMQGYIGELYKAIAYDKVQVGGYFYWSLMDNFEWADGFRPRFGLVRVNFTSQARFPKESSFMYQEMMARVTP 549          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: EWM21332.1 (glycosyl hydrolase family 1 [Nannochloropsis gaditana])

HSP 1 Score: 587.8 bits (1514), Expect = 4.400e-164
Identity = 269/493 (54.56%), Postives = 355/493 (72.01%), Query Frame = 0
Query:   61 PSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNF-TSQARYPKESALMYKDMMTRFSPTEA 553
            P + C  Y  P +P     M   EV+ SKDT FP  F WG AT+AYQIEGA  +DGR  S+WDTF    G +     GDVACDHY+ YKEDV LMK++G++ YR+SISWSR++P+G G VN KGLE+Y  L DELLANGI P VTLYHWDLPE L  +  GW ++ T +AFAE++D++F+ LGD+VK W TLNEPW +++ GYG G HAPG+K++    YL+GHN LL H+ AVKVY+ KY A QGGKIG+ +++++K+  C +  DKEAAERS I+ + WFADP++ GDYPE M++  GDRLP FT  +KA+L+GS DF G+NHY T L+  P  +  +GNY+ D+      D  WP+G++ WL  VPWG R+LL WIK RY+DP IY+TENG+S P E E+K  A+ LNDT R  ++ GY+AE++KAI FDKVNVAGY+YW+LMDNFEWADG+  RFG+I +++   Q R PK+SA +YK+M+ ++    A
Sbjct:   47 PDVTCWDYTIPGEPGG--EMTAAEVWSSKDTAFPPGFVWGAATAAYQIEGAVAQDGRQPSMWDTFVQIPGNIANGDTGDVACDHYNRYKEDVQLMKDMGLQSYRYSISWSRVLPEGRGEVNAKGLEFYKDLTDELLANGITPAVTLYHWDLPEAL-SKQGGWLNESTVEAFAEFSDVMFDALGDKVKLWFTLNEPWTTSIAGYGQGQHAPGLKDMAENPYLSGHNQLLGHAAAVKVYREKYAATQGGKIGLVLSTEWKEPLCRSQGDKEAAERSLIWYLAWFADPIYKGDYPEAMKERVGDRLPVFTEAQKADLKGSSDFFGINHYATNLLQDPTEKIGAGNYFADLNGWIMMDPRWPMGDASWLSVVPWGMRRLLRWIKERYDDPEIYVTENGLSVPGESEMKL-ADALNDTERIDYLNGYVAEIWKAIHFDKVNVAGYYYWSLMDNFEWADGFDVRFGLIHIDYDNDQKRTPKKSAEVYKNMIAKYGGAAA 535          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: XP_005853606.1 (hypothetical protein NGA_0437801 [Nannochloropsis gaditana CCMP526] >EKU22754.1 hypothetical protein NGA_0437801 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 550.1 bits (1416), Expect = 1.000e-152
Identity = 251/450 (55.78%), Postives = 326/450 (72.44%), Query Frame = 0
Query:   61 PSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFE 511
            P + C  Y  P +P     M   EV+ SKDT FP  F WG AT+AYQIEGA  +DGR  S+WDTF    G +     GDVACDHY+ YKEDV LMK++G++ YR+SISWSR++P+G G VN KGLE+Y  L DELLANGI P VTLYHWDLPE L  +  GW ++ T +AFAE++D++F+ LGD+VK W TLNEPW +++ GYG G HAPG+K++    YL+GHN LL H+ AVKVY+ KY A QGGKIG+ +++++K+  C +  DKEAAERS I+ + WFADP++ GDYPE M++  GDRLP FT  +KA+L+GS DF G+NHY T L+  P  +  +GNY+ D+      D  WP+G++ WL  VPWG R+LL WIK RY+DP IY+TENG+S P E E+K  A+ LNDT R  ++ GY+AE++KAI FDKVNVAGY+YW+LMDNFE
Sbjct:   47 PDVTCWDYTIPGEPGG--EMTAAEVWSSKDTAFPPGFVWGAATAAYQIEGAVAQDGRQPSMWDTFVQIPGNIANGDTGDVACDHYNRYKEDVQLMKDMGLQSYRYSISWSRVLPEGRGEVNAKGLEFYKDLTDELLANGITPAVTLYHWDLPEAL-SKQGGWLNESTVEAFAEFSDVMFDALGDKVKLWFTLNEPWTTSIAGYGQGQHAPGLKDMAENPYLSGHNQLLGHAAAVKVYREKYAATQGGKIGLVLSTEWKEPLCRSQGDKEAAERSLIWYLAWFADPIYKGDYPEAMKERVGDRLPVFTEAQKADLKGSSDFFGINHYATNLLQDPTEKIGAGNYFADLNGWIMMDPRWPMGDASWLSVVPWGMRRLLRWIKERYDDPEIYVTENGLSVPGESEMKL-ADALNDTERIDYLNGYVAEIWKAIHFDKVNVAGYYYWSLMDNFE 492          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: PCJ92281.1 (beta-glucosidase [Flavobacteriaceae bacterium])

HSP 1 Score: 496.9 bits (1278), Expect = 1.000e-136
Identity = 245/459 (53.38%), Postives = 309/459 (67.32%), Query Frame = 0
Query:   92 KFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRAS--------SGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKD 543
            +FP +F WG+ATS+YQIEGA  E GR  SIWD  AH  G+   N+NG+VACDHYH YKEDV LM +LG+K YRFSISWSRI PDG G +N +G+++YS L+DELL + I P++TLYHWDLP  LQ    GW +   +D FA YA+I F H GDRVK WITLNEPW  A+LGYG GV APG K+ K   YLA H LL +H KAVKVY+ KYQ  QGGKIGIT N D+++      +D EAAERS +F +GWFADP++FGDYP+ MR   GDRLP F+AE+  N++GS DF GLNHYT +  +     A+        +G  + D     +SD  W +    W   VPWG RKLL WI  RY +P  YITENG S   +D++++    + DT R+ F++GY+A   KAI  + VN+ GYF W+ MDNFEWA GY  RFGI  V++ +  R PK SAL +K+
Sbjct:    3 QFPNDFVWGSATSSYQIEGAAAEGGRAWSIWDAHAHIPGRTHNNENGNVACDHYHRYKEDVKLMADLGLKAYRFSISWSRIQPDGQGEINQEGIDFYSNLIDELLKHNITPWITLYHWDLPLALQTEKDGWLNPDIADFFATYAEICFKHFGDRVKNWITLNEPWVVAILGYGEGVFAPGRKS-KDEPYLAAHQLLRSHGKAVKVYREKYQEKQGGKIGITNNCDWREPLTNKPEDIEAAERSLLFFLGWFADPIYFGDYPKVMRDRVGDRLPKFSAEDVENIKGSSDFFGLNHYTASYAADVDPNANDDDVTVYGNGGIFEDQYVDLTSDPKWKMTTMNW-AIVPWGCRKLLEWISDRYGNPPTYITENGCS--LDDKLENGE--VKDTIRKEFVEGYLAACKKAID-NGVNLQGYFVWSFMDNFEWALGYSKRFGIHYVDYETLERTPKNSALWFKE 454          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: WP_013767010.1 (beta-glucosidase [Haliscomenobacter hydrossis] >AEE52472.1 beta-galactosidase [Haliscomenobacter hydrossis DSM 1100])

HSP 1 Score: 493.0 bits (1268), Expect = 1.500e-135
Identity = 242/463 (52.27%), Postives = 314/463 (67.82%), Query Frame = 0
Query:   90 DTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASSGNYYTDMGTMDSSD------KSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMTR 547
            D  FP +F WG+ATS+YQIEG +  DG+G SIWD F    GKV    +G++ACDHYH ++EDVALMK+LG+K YRFSISW R++P G G VN  GL++Y+ L+DELL  GIEP+VTLYHWDLP  L+    GW  +  SDAFAEYAD+ F H GDRVK WIT+NE W  A+LGYG GV APGI++ K   YLAGHNLL AH+KAV VY+ KYQ+ Q GKIGIT N D+++   ++  D++AAER+  F + WFADP++ GDYP  MR+  G+RLPSF+A EK  ++GS DF GLNHYTT   S     + +G+ Y + G  +  D        WP     W   VPWG RKLL WI+ARYN+P IYITENG +    D+   D + + D  R  F +GY++ +++AI    VN+ GYF W+L+DNFEWA GY  +FGI  V   +  R PK+SA  Y ++++R
Sbjct:    4 DKPFPVDFLWGSATSSYQIEGGYLSDGKGPSIWDVFCMIPGKVYNQDHGNIACDHYHRFREDVALMKQLGLKAYRFSISWPRVLPAGRGAVNQAGLDFYNALIDELLQAGIEPWVTLYHWDLPAALEFELHGWLGEGISDAFAEYADLCFQHFGDRVKNWITINEAWVVAILGYGHGVFAPGIQS-KDLPYLAGHNLLKAHAKAVDVYRKKYQSQQQGKIGITNNCDWREPLTDSPADRDAAERALEFFLAWFADPIYNGDYPACMRERLGERLPSFSAAEKELIKGSSDFFGLNHYTTMYASDATQNSEAGSVYGNGGLSEDQDVNLSVAPDWPQTAMQW-AIVPWGCRKLLQWIEARYNNPPIYITENGCA---FDDQLIDGK-VADLERIAFFEGYLSAIHEAIS-SGVNLQGYFIWSLLDNFEWASGYSKKFGITYVEEGTLQRVPKDSAKWYGEVISR 459          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: ETP30143.1 (beta-galactosidase [Phytophthora parasitica P10297])

HSP 1 Score: 492.3 bits (1266), Expect = 2.500e-135
Identity = 246/475 (51.79%), Postives = 323/475 (68.00%), Query Frame = 0
Query:   88 SKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGW-WSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIK-NIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCA-----CETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTT----------ALVSHPLFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPI-IYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMM 545
            SKD KFP  F WGTAT++YQ+EGA +E GRG+SIWD F+ T GK+     G+ A DHYH YKEDV LMK++G+K YR SI+WSRIIP G G VN +G+E+Y+ L++ELLAN I P VTLYHWDLP  LQ  + GW   +   DAF +YA + F   GDRVK W+TLNEPWCSA LGYGIGVHAPG K   ++  YL+ HNLLLAH++AV+ Y+ ++QA Q G+IGIT+N D+++ A      + ++++EAAERS +F +GWFADPV+ GDYP+ M+  CG RLP FT +EK  L+GS DF GLNHY T          A ++ P    ++G Y  D GT  +SD SW   + GW   V WGF+KLLVWI+ RY  P  I +TENG + P  D  K +A+  ND FR  F + Y+  ++ AI  +  +V GYF W+ +DN+EWA+GY  RFG+  VN+ +  R PK+SAL Y D++
Sbjct:    2 SKDMKFPEGFMWGTATASYQVEGATNEGGRGDSIWDAFSRTPGKIVNGDTGEKAVDHYHRYKEDVQLMKKMGLKAYRLSIAWSRIIPAGIGKVNEEGVEFYNNLINELLANDITPLVTLYHWDLPLALQTEYDGWLGGKFIQDAFVQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGIGVHAPGRKCKPQTEVYLSAHNLLLAHARAVEAYRNEFQAVQKGRIGITLNCDWREPAPTDDPAQKAKNEEAAERSLLFFLGWFADPVYKGDYPQVMKDRCGLRLPKFTEDEKKLLKGSSDFFGLNHYGTSYTKPSAEYEAKIAPP--NDATGGYGLDEGTKLTSDDSWKRTDMGW-NAVGWGFQKLLVWIQKRYAVPNGILVTENGCAWP--DRTKEEAQ--NDDFRVGFYKEYLTGLHNAIA-EGADVRGYFAWSFIDNYEWAEGYTKRFGLHWVNYETLERTPKKSALWYGDVI 468          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: OWY98861.1 (Beta-galactosidase [Phytophthora megakarya])

HSP 1 Score: 492.3 bits (1266), Expect = 2.500e-135
Identity = 248/473 (52.43%), Postives = 320/473 (67.65%), Query Frame = 0
Query:   88 SKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGW-WSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIK-NIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETS-----QDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVS-HPLFRA-------SSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPI-IYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMM 545
            SK  KFPA F WGTAT++YQ+EGA +E GRG+SIWD F+ T GK+     G+ A DH+H YKEDV LMK++G+K YR SI+W RIIP G G VN +G+E+Y+ L++ELLAN I P VTLYHWDLP  LQ  + GW   +   DAFA+YA + F   GDRVK W+TLNEPWCSA LGYG GVHAPG K    +  YLAGHNLLLAH++AV+VY+ ++QA Q G+IGIT+N D+++ A  T      +++EAAERS +F +GWFADPV+ GDYP+ M+  CG RLP FT +EK  L+GS DF GLNHY T      P F A       ++G Y  D GT  +SD +W   + GW   V WGF+KLLVWI  RY  P  I +TENG + P  D  K +A+  ND FR  F + Y+  ++ AI  +  +V GYF W+ +DN+EWA+GY  RFG+  VN+ +  R PK+SAL Y D++
Sbjct:    2 SKPLKFPATFLWGTATASYQVEGAVNEGGRGDSIWDAFSRTPGKIVNGDTGENAVDHFHRYKEDVQLMKKMGLKAYRLSIAWPRIIPAGIGKVNEQGVEFYNNLINELLANDITPLVTLYHWDLPLALQTEYDGWLGGKFIQDAFAQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGNGVHAPGRKYKQHTEVYLAGHNLLLAHARAVEVYRNEFQAVQKGRIGITLNCDWREPAPTTDPTQKIKNEEAAERSLLFFLGWFADPVYKGDYPQVMKDRCGLRLPQFTEDEKKLLKGSSDFFGLNHYGTNYAEPSPEFEAKIPPPNDNTGGYGADEGTKLTSDDAWRRTDMGW-NTVGWGFQKLLVWIHKRYAHPNGILVTENGCAWP--DRTKEEAQ--NDDFRVGFYKEYLTGLHNAIA-EGADVRGYFAWSFVDNYEWAEGYTKRFGLHWVNYETMERTPKKSALWYGDVV 468          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: PKK89023.1 (beta-glucosidase [Candidatus Wallbacteria bacterium HGW-Wallbacteria-1])

HSP 1 Score: 491.1 bits (1263), Expect = 5.700e-135
Identity = 240/460 (52.17%), Postives = 306/460 (66.52%), Query Frame = 0
Query:   88 SKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASSGNY--YTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMT 546
            S   KFP +F WGTATS+YQIEG   E GRGE+IWD F+HT GKV  NQNGD+ACDHYH +KEDVAL+K LG+  YRFSI+WSRI P G G  N +GLE+Y+ L+DEL+ NGIEP++TLYHWDLP +L     GW +   +D FA YADI F + GDRVK+WIT+NE W  +L GYG GV APGI++ K+  ++AGHNLL AH +A  +Y+TKYQ  Q G IG+T N D+++ A     D +AA+R+  F +GWFADP++FG YP+ MR   G RLP F+AEE A ++ S DF GLNHY+T LVS     + +  Y  + + G   SSD SW     GW   VP G  KLL WI  RYN P IYITENG +    D+  S    LND  R  ++ GY+     +I    V + GYF W+LMDNFEWA GY  +FGI  V++ +  R PK+SA  YK +++
Sbjct:    5 SDTNKFPHDFVWGTATSSYQIEGGVSEGGRGETIWDIFSHTPGKVHNNQNGDIACDHYHRFKEDVALLKALGVTAYRFSIAWSRIQPTGRGKPNKEGLEFYNALIDELIENGIEPWITLYHWDLPLELHTDFNGWLNPEIADFFALYADICFENFGDRVKHWITINEAWVISLCGYGSGVFAPGIQS-KTAPFIAGHNLLRAHGRAASLYRTKYQTPQKGVIGMTNNCDWREPATADEADIQAAQRANEFFLGWFADPIYFGKYPDCMRMRLGKRLPEFSAEESAMIKNSSDFFGLNHYSTELVSELKKPSHNTEYSIFNECGVKLSSDPSWKKTAMGW-NIVPQGLEKLLCWIDGRYNQPEIYITENGCATEDTDKDAS----LNDQSRIDYLNGYLQSCRSSIS-KGVKLRGYFLWSLMDNFEWAHGYEKQFGIHHVDYKTLERTPKKSAEWYKAIIS 457          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: ETL79170.1 (beta-galactosidase [Phytophthora parasitica])

HSP 1 Score: 490.7 bits (1262), Expect = 7.400e-135
Identity = 245/475 (51.58%), Postives = 322/475 (67.79%), Query Frame = 0
Query:   88 SKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGW-WSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIK-NIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCA-----CETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTT----------ALVSHPLFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPI-IYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMM 545
            SKD KFP  F WGTAT++YQ+EGA +E GRG+SIWD F+ T GK+     G+ A DHYH YKEDV LMK++G+K YR SI+W RIIP G G VN +G+E+Y+ L++ELLAN I P VTLYHWDLP  LQ  + GW   +   DAF +YA + F   GDRVK W+TLNEPWCSA LGYGIGVHAPG K   ++  YL+ HNLLLAH++AV+ Y+ ++QA Q G+IGIT+N D+++ A      + ++++EAAERS +F +GWFADPV+ GDYP+ M+  CG RLP FT +EK  L+GS DF GLNHY T          A ++ P    ++G Y  D GT  +SD SW   + GW   V WGF+KLLVWI+ RY  P  I +TENG + P  D  K +A+  ND FR  F + Y+  ++ AI  +  +V GYF W+ +DN+EWA+GY  RFG+  VN+ +  R PK+SAL Y D++
Sbjct:    2 SKDMKFPEGFVWGTATASYQVEGATNEGGRGDSIWDAFSRTPGKIVNGDTGEKAVDHYHRYKEDVQLMKKMGLKAYRLSIAWPRIIPAGIGKVNEEGVEFYNNLINELLANDITPLVTLYHWDLPLALQTEYDGWLGGKFIQDAFVQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGIGVHAPGRKCKPQTEVYLSAHNLLLAHARAVEAYRNEFQAVQKGRIGITLNCDWREPAPTDDPAQKAKNEEAAERSLLFFLGWFADPVYKGDYPQVMKDRCGLRLPEFTEDEKKLLKGSSDFFGLNHYGTSYTEPSAEYEAKIAPP--NDATGGYGLDEGTKLTSDDSWKRTDMGW-NAVGWGFQKLLVWIQKRYAVPNGILVTENGCAWP--DRTKEEAQ--NDDFRVGFYKEYLTGLHNAIA-EGADVRGYFAWSFIDNYEWAEGYTKRFGLHWVNYETLERTPKKSALWYGDVI 468          
BLAST of NO04G04860 vs. NCBI_GenBank
Match: WP_007278860.1 (beta-glucosidase [Lentisphaera araneosa] >EDM27250.1 TonB-like protein [Lentisphaera araneosa HTCC2155])

HSP 1 Score: 490.7 bits (1262), Expect = 7.400e-135
Identity = 249/468 (53.21%), Postives = 314/468 (67.09%), Query Frame = 0
Query:   93 FPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHP-------LFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMTRFSPTEAV 554
            FP +F WG+AT++YQIEGA  E GRG SIWD   +T GK+  N+ GDVACDHYH ++ DV LMK LG+K YRFSI+W RI  DG G VN +G+ +Y+ L+D LL + IEP+VTLYHWDLP  LQ  H GW ++     F +YA I F + GDRVK+WITLNEPWCSA+LGYG+G HAPG +  K   YLA HNLLL+H++AVKVYKT++Q  QGG IGIT N DY+    +++QD+EAA+RS  F + WFADPV+ GDYP+ MR+  GDRLP+FT +EK  L GS DF GLNHY++ L S P       L  A +G    D     S D SW     GW   VP G R+LL WIK RY +PIIYITENG +    DE   +   LNDT R  F + YI    +AI+ + V++ GYF W+LMDNFEWA GY  RFG+  V++ +Q R PK SA +Y D++ +    E V
Sbjct:    2 FPKDFVWGSATASYQIEGAVKEAGRGMSIWDMMCYTPGKIANNETGDVACDHYHRFEADVKLMKSLGLKAYRFSIAWPRIQADGKGEVNPRGIAFYNKLIDCLLEHDIEPWVTLYHWDLPLALQVEHDGWLNKDIVSYFEKYARICFENFGDRVKHWITLNEPWCSAVLGYGLGEHAPG-RVSKVEPYLAAHNLLLSHARAVKVYKTEFQ-DQGGVIGITNNCDYRYPLTDSAQDREAAQRSLEFFLAWFADPVWKGDYPQVMREVLGDRLPNFTEDEKKELVGSSDFFGLNHYSSMLASEPNASQLEELNLAGNGGMIDDQNVHLSVDPSWQQTHMGW-NIVPDGCRRLLHWIKERYGNPIIYITENGCAC---DEPNKEI-ALNDTMRADFYKSYIKASGQAIE-EGVDLRGYFAWSLMDNFEWAHGYGQRFGMCHVDYETQERTPKLSANVYSDIIAQNGVVEKV 461          
The following BLAST results are available for this feature:
BLAST of NO04G04860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28877.14.300e-26076.59lactase-phlorizin hydrolase [Nannochloropsis gadit... [more]
EWM21332.14.400e-16454.56glycosyl hydrolase family 1 [Nannochloropsis gadit... [more]
XP_005853606.11.000e-15255.78hypothetical protein NGA_0437801 [Nannochloropsis ... [more]
PCJ92281.11.000e-13653.38beta-glucosidase [Flavobacteriaceae bacterium][more]
WP_013767010.11.500e-13552.27beta-glucosidase [Haliscomenobacter hydrossis] >AE... [more]
ETP30143.12.500e-13551.79beta-galactosidase [Phytophthora parasitica P10297... [more]
OWY98861.12.500e-13552.43Beta-galactosidase [Phytophthora megakarya][more]
PKK89023.15.700e-13552.17beta-glucosidase [Candidatus Wallbacteria bacteriu... [more]
ETL79170.17.400e-13551.58beta-galactosidase [Phytophthora parasitica][more]
WP_007278860.17.400e-13553.21beta-glucosidase [Lentisphaera araneosa] >EDM27250... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009287NSK009287Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04860.2NO04G04860.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO04G04860.1NO04G04860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|298677gene_2274Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100095g6gene1727Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04860.2NO04G04860.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO04G04860.1NO04G04860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04860 ID=NO04G04860|Name=NO04G04860|organism=Nannochloropsis oceanica|type=gene|length=5674bp
GGGGAGGTTCTTGTTTTCTTCTGTATTCTTTTTTGGACGATTCTTTGATT
TAAGTGATATAAAAGAGGGAAAGACAATGCTCTGAATAATCGTGCTGGAG
TAAGATCGTCACATTGGAAACACATTGACATGAGAGGGGAAAAATCGACA
TGGGCCAGACGCCGGAAGGCAAGAGAGGGCAGGGGGGAGGACAAAGGCGC
TTGCCACAGTAACAAACAGGAGGCACAGGTTCAGAGATTGCGATTCACTT
GAAATTGTGAACACATATTGTGCTTTTAGTTTACTATAGGGCCCTCCAAG
ATATCTCGAAGAGCACAACCGGCAAAGAAGGCGAACACGTCGGAACACGT
TCACGTGGAAAACTCTTCGCCTCCACATTTTTCATAGCTCTTGTTCGTCA
AATTAGGCACAGCAACTTAAACAATAGGATCTGACTGATCGAACGAAGGT
ATGTATTTTACATAGCTGAAACCAGGGACGGATAAACTTTTGCTTGGTCT
TCTTGGCCATGTTGCAAGTGCGTGTCGCCACTGGCGACTTCCCTCGGGTT
TCCCATAGCACGAGACATACACACACGATGCTAGCGTCTCCTCTTGATCA
CGCGCCGCAAACCTTTCCACGCCACAATTTGCACATACGCAATTTACAAG
ACGATATGCCAGCAAGGGCAGGGTAAGGGAGAGGCACAAGAGTCCAAGGA
AAAGACGGATTGCAGTAGGATTTGTTGTCGTTCCACTTTGAGGAGACGTA
CTCCAAAATCGAGCCAAGTCCGCCATCCCCGATGTCACATGCCTTTCAAC
TGGCCACCTGGACGGCTGGCTTCCAACATTGTGTTTGCCCAAACAGAGTC
TGATCTTGGCATCATGGAGGCCTCCAGGAGGCAGCGCGGCTGGCATAATT
ACTTTTTTGGCGCCGAGCGGAGGGTGTCACATCCCGTCCACTGCCAACAA
GAGCGCATTAAGGAGCACAATACCAAGCACCTCTGGCAGAGCGCACTCCT
CCACTCACCGCTTCACATACATACACACAGATAAGAGGAAGCGTTCAAGG
TAGCAGGTGATCACCAAGCAAAAAGCGACCGCACCGATCTATTCTTACTC
GGCCCGCCCACCCTCCGGTGCTCGCCCTCAACTACGACATAGACCAAGTG
CTTACCATGGCAGATCGATCCCTCACCACTGGCATGCGCACTCAGAGAGG
CGAATGGTTTCGCAGCGTTGCTCCTCCTGTCGTGGTGGTGTGTGCGTTGG
CAGGACTGGCCTCTGGCCTCTACATATTCCTAGGCACTAATCCATTTGTC
TATCGCGTTCCTCCTTCCGTAGAGGGGACTGgtatggacgggggtctgga
gggagggagggaggaaaggcgggcgggagtgcaggaggggagaaagaagg
gagaatgaaataaatagggggagagcatttctatagaggacatcagccag
actagacggcacataatgtgttcctcgttctctaaactctcctcttccct
tctccctccttctctccttccctcctgctcccccttctccagGAAAGCCC
AGCATGCAATGCAGCCTTTATCAAGACCCCACCGATCCTACGTCTATCAT
TAATATGCCCGATAAAGAGGTGTTTGACAGCAAGGATACCAAGTTCCCGG
CAGAGTTCGCGTGGGGTACGGCCACGAGTGCTTATCAGATAGAAGGAGCT
TGGGACGAGGATGGACGGGGAGAATCCATTTGGGACACGTTTGCGCATAC
AAAGgtgggtaagtgggagggagggagggagggaaggagggcctttattg
gaggagggccaggactcaggcttttgttccctttgtgccttcccctcctc
gtatagGGCAAGGTGGAGGGCAATCAGAACGGGGACGTGGCATGCGACCA
CTACCATCTCTACAAAGgtacgtatgctctcctctttcccctccttcttc
cctctttcccttccctctctccctttgtatgtctgctccgattcaatggc
aatggagcgaagggttgggctcttgatcctctttgactcgcccaggatac
ttccctccctctctccttacccccctccccccctcccttgtaacgttcca
aaccaccatatttctctcccgtgtttctctgcatccacccgtccgcccct
ctttccctccctccctccctccctccccccctccctcccttgcagAGGAC
GTGGCCCTCATGAAGGAGCTTGGCATTAAACATTATCGATTCTCCATATC
TTGGTCTAGAATCATACCTGATGGCACGGGGAACGTCAATTTCAAGgtaa
gccgtctgtccgtccgttcctccctccctctctccctacttcctcccttt
gctccctctttccctgcatgtattttttcttggtcgcacattttcaagaa
atcgaccctaacgacaccgcccgccctccctccgtccccccctctttccc
tccctccctccctagGGCCTGGAGTGGTACAGCGGCCTCGTGGACGAGTT
ATTAGCGAACGGCATTGAGCCCTACGTGACTCTCTATCACTGGGATCTAC
CGGAGAAACTGCAGGAGCGGCACCAGGGCTGGTGGTCGCAGGTGACGAGC
GACGCCTTTGCTGAGTATGCCGACATTGTCTTCAATCATTTGGgtgaggg
agggcgggagggagggagagcgggagggagggagggagggagggagggag
ggagggagggaaacatgttgtctgaagcgtcgggtcgtctgagaggagcc
ttttgccctaaatgcaaatctccttccttcttccctcccttcctccctcc
ctccctccctccccctttggtcctcagGCGACCGTGTCAAGTATTGGATT
ACGTTAAACGAGCCCTGGTGCTCTGCCCTTCTAGGGTACGGCATCGGAGT
CCACGCTCCGGGTATCAAAAACATCAAGTCAGgtaaaacgctcatccttt
gtttcccctcgttcttctctctctttccctccctccctctcttcctccgc
cccactgtcccctcgtgcctttcgctccatcaggctgcttacgcatcttc
ccccacctgcacccctcactcctttccttctttcgctcccaagGCGCCTA
CCTCGCGGGCCACAACCTCTTGCTCGCGCACTCCAAAGCCGTCAAGGTCT
ATAAAACCAAATACCAAGCAGCGCAAGGGGGAAAGATCGGGATCACCATC
AACAGTGATTACAAACAGgtaggtaggtagggagggagggagggagggag
ggagggagggagggagggagggagggagggaggggggtatatctcgagcc
tgcgctacttttcgcctcccctctttgttgattcctcctgcctgtctcat
ttccatacaatccctccctccctccctcccttcctccctccctccttcag
TGCGCCTGTGAAACGAGCCAGGACAAGGAGGCAGCGGAGAGGTCTCAGAT
CTTCGTCATGGGGTGGTTTGCCGACCCCGTGTTTTTTGGAGACTACCCGG
AAGAGATGCGGAAGACGgtaaggaaggagggaggaagggcaggagggcgg
gggtgggacgataatgcttttgcgattgcagaagggtatcagacacattt
tggtctctcctcaccctccctttcccccttcttccctccctccccctctc
tctccccctctccctcctcctgtagTGCGGCGATCGCCTCCCCTCCTTCA
CGGCGGAAGAGAAAGCTAATCTGCGGGGTTCATTGGATTTCTTAGGCCTT
AATCATTACACCACGGCCTTGGTGTCACACCCACTCTTCCGCGCGAGTAG
TGGGAATTATTACACGGACATGGGCACTATGGATTCGTCGGATAAGgtgc
atcttccctccctccctccctccctctcttccttccttcttttctctctt
tctttgtgttctatcccctctccaccccctcgcgcccattgagctcgcca
agtcgaataatggatggagagggagggagaaaaggagaaaaggagggagg
ggacaaggatgagggtcatatccgttaatttgggcatttattcactcctc
cctcccttcctccctccctccctcctcctccccccttcctagTCCTGGCC
TGTGGGTGAGTCCGGCTGGCTTAAGGATGTCCCCTGGGGATTCCGCAAGC
TCTTAGTCTGGATCAAGGCGCGgtacgtccctccttccctccctccctcc
caccctccctccttccctccctctctccctccctccctcccatccacctt
ttcctctcacctccttccccttcccctccttccccttctcctcctttctt
ccctccctccctcgcttagATACAACGATCCGATCATCTACATCACCGAA
AACGGCGTCTCGGGTCCCAAGGAAGATGAAGTTAAATCAGATGCAGAAGG
CTTGAACGACACCTTCCGTCAGgtgggccctccctccaaccctcactcgt
tcctccttccccttccctcccgctctatcttcctcgttctttccctctcg
tcctcctgccttctctctgtctgccgtactcatcgacaaaaaatgacttt
tattccctcccatccccacgtcatatccatttccctatatcatccttcac
ctgcctaatctcaatcacggcgtttccctatatcaccaccacctacagAC
GTTTATGCAAGGCTATATCGCTGAGATGTACAAGGCCATCAAGTTCGACA
AGgtacggcccttcccttcctccctccctccctccctcacctccctcgcc
tccctccctccctccctccctccctccttcaggtcaagggcgcagggtat
ttctactgatcctctctgtgtgcttcgcataatttcctctaaccactcct
ccctccctccctccctccctccctccctctcttccttcctccccccctcc
ctctctctctcctttcctcagGTTAATGTCGCAGGATATTTCTACTGGGC
TTTAATGGATAATTTCGAATGGGCCGACGGTTACCGCCCTCGTTTCGGGA
TCATCCGTGTGAATTTCACCAGCCAAGCTCGCTATCCTAAGGAAAGCGCA
CTCATGTATAAGGATATGATGACTCGTTTCTCACCTACCGAGGCCGTGCC
GGTCATCCCTACTACTCCTGCTGCTGGTGCAGCTGCTGCTGAAGAAGCAA
ATCCCGCTGGGCCTGTTGCACCTATAGCTCCGATTGGTGAAGATGTTTCT
CCTGCCCAGCCGGCCCGGGTGTCAGTAGTACCAGCAGCAGGCGCTCCTTC
TACTGTACAAGACGCTGCCACTGTTGCAGATTTACAAGAAGGACTTATCG
CTGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCCGCTGATGCTGCTGCTGCTGATGCCTCAGCCGCTGCGCCTGTCAC
TCAGGGTGTTCCCATGGATAGTGCCGGTGTGGCCCAAACCCACGTGCTTG
CGGAAGAGCTTCAGGGATTCGAGGAGGGAGAGGAGGGAGTGATGGAGGTG
GAGGTGGGTGAGGAGGGAGGACAGCAACGATTGCGGAAGCTGTAGGAGAT
GGGTGAAAGAAAGGAATGAGGGAGGGAGGGAGGCAGGGGGATCGAAATTC
GTGTGATATATGATAATTCTTGTAGAGAGCTCAAAAAGAAGTAAAGACAG
TGTGAGAGTTCGCAATGTAATATA
back to top

protein sequence of NO04G04860.2

>NO04G04860.2-protein ID=NO04G04860.2-protein|Name=NO04G04860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=538bp
MADRSLTTGMRTQRGEWFRSVAPPVVVVCALAGLASGLYIFLGTNPFVYR
VPPSVEGTGKPSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWG
TATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKE
DVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGI
EPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWI
TLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTK
YQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGD
YPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASS
GNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYI
TENGVSGPKEDEVKSDAEGLNDTFRQVGPPSNPHSFLLPLPSRSIFLVLS
LSSSCLLSVCRTHRQKMTFIPSHPHVISISLYHPSPA*
back to top

protein sequence of NO04G04860.1

>NO04G04860.1-protein ID=NO04G04860.1-protein|Name=NO04G04860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MADRSLTTGMRTQRGEWFRSVAPPVVVVCALAGLASGLYIFLGTNPFVYR
VPPSVEGTGKPSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWG
TATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKE
DVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGI
EPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWI
TLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTK
YQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGD
YPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASS
GNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYI
TENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGY
FYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMTRFSPT
EAVPVIPTTPAAGAAAAEEANPAGPVAPIAPIGEDVSPAQPARVSVVPAA
GAPSTVQDAATVADLQEGLIAAADAAAAAAAAAAAAAAAADAAAADASAA
APVTQGVPMDSAGVAQTHVLAEELQGFEEGEEGVMEVEVGEEGGQQRLRK
L*
back to top
Synonyms
Publications