NO04G04770, NO04G04770 (gene) Nannochloropsis oceanica

Overview
NameNO04G04770
Unique NameNO04G04770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2540
Alignment locationchr4:1300069..1302608 +

Link to JBrowse

Properties
Property NameValue
Descriptionalpha/beta-Hydrolases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1300069..1302608 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR022742Lysophospholipase_put
Homology
BLAST of NO04G04770 vs. NCBI_GenBank
Match: EWM28881.1 (hypothetical protein Naga_100095g15 [Nannochloropsis gaditana])

HSP 1 Score: 446.4 bits (1147), Expect = 1.100e-121
Identity = 214/300 (71.33%), Postives = 243/300 (81.00%), Query Frame = 0
Query:   87 EPSTTYGDDRRLYPLPHKRCSAASLPLDVQHSDRFLVSRRGQALYQQTYHPPSLNNETLKGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQLHIAHAVADLCDQYGALSLGYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGMRVSTLLHTLSTLDEVYLHAP---TPSSLDP------------PPPPSVCTFEELTAPILILQGEEDQFHGGR 372
            +P TT+GD RRLYPLP+KRCS ASLPL+VQHSDRFLVSRRGQALY QT+ PP L  E +KGVVF+VHDYGDHSSWFLRDLAV LCQQ + VVS+DLEGHGRSDGLRG+    HAV DLCDQYGA SL   +TPCFLLGEGLGAALAYKTY MQGGR+WDG+I+LSPTLAFPPRLRP  W++ LLRR E R+G  PL+PWG+ YLDLL +SV RQEV+ENPFFI QHGMRV+T+   L+ LDE+YLH P   TP+SL P            PP P+VCTF E+TAP LILQGEED+FHGGR
Sbjct:   75 DPPTTFGDHRRLYPLPYKRCSPASLPLNVQHSDRFLVSRRGQALYMQTFRPPHLKEEGVKGVVFLVHDYGDHSSWFLRDLAVALCQQEFLVVSLDLEGHGRSDGLRGRFDFGHAVIDLCDQYGAFSLEQQSTPCFLLGEGLGAALAYKTYQMQGGRFWDGIILLSPTLAFPPRLRPSPWMLRLLRRLEPRMGDLPLIPWGRQYLDLLSDSVARQEVMENPFFI-QHGMRVATIFQVLAALDELYLHPPPSFTPASLGPSPPSSGVPPRTSPPSPAVCTFNEMTAPFLILQGEEDRFHGGR 373          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: XP_005853924.1 (alpha beta-hydrolase domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU22435.1 alpha beta-hydrolase domain-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 296.2 bits (757), Expect = 1.800e-76
Identity = 144/210 (68.57%), Postives = 165/210 (78.57%), Query Frame = 0
Query:  177 VVSIDLEGHGRSDGLRGQLHIAHAVADLCDQYGALSLGYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGMRVSTLLHTLSTLDEVYLHAP---TPSSLDP------------PPPPSVCTFEELTAPILILQGEEDQFHGGR 372
            VVS+DLEGHGRSDGLRG+    HAV DLCDQYGA SL   +TPCFLLGEGLGAALAYKTY MQGGR+WDG+I+LSPTLAFPPRLRP  W++ LLRR E R+G  PL+PWG+ YLDLL +SV RQEV+ENPFFI QHGMRV+T+   L+ LDE+YLH P   TP+SL P            PP P+VCTF E+TAP LILQGEED+FHGGR
Sbjct:   22 VVSLDLEGHGRSDGLRGRFDFGHAVIDLCDQYGAFSLEQQSTPCFLLGEGLGAALAYKTYQMQGGRFWDGIILLSPTLAFPPRLRPSPWMLRLLRRLEPRMGDLPLIPWGRQYLDLLSDSVARQEVMENPFFI-QHGMRVATIFQVLAALDELYLHPPPSFTPASLGPSPPSSGVPPRTSPPSPAVCTFNEMTAPFLILQGEEDRFHGGR 230          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: OEL25981.1 (Caffeoylshikimate esterase [Dichanthelium oligosanthes])

HSP 1 Score: 127.1 bits (318), Expect = 1.400e-25
Identity = 93/300 (31.00%), Postives = 132/300 (44.00%), Query Frame = 0
Query:  146 KGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQL-HIAHAVADLCDQYGALSL--GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLG-KAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGM-RVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLL-GEGGXXXXXXXXXXRVWGDIVDWLNARCT 440
            K +VFMVH YG+  SW  +  AV L + G+   + DL GHGRS GLR  +  +  AVADL   + A+     +A  PCFL GE +G A+    +L      W G ++++P      R+RPP W +  +  F  R    A +VP   L    +     R     NP  ++ +G  R+ T++  L   DE+                      E+T P L++ G  D+                     LYE + S DK + +Y GM H +L GE            RV GDI+ WLN RCT
Sbjct:   62 KALVFMVHGYGNDISWTFQSTAVFLARSGFACFAADLPGHGRSHGLRAFVPDLDAAVADLLAFFRAVRAREDHAGLPCFLFGESMGGAICLLIHLRTRPEEWAGAVLVAPMCRISDRIRPP-WPLPEILTFVARFAPTAAIVPTADLIEKSVKVPAKRVIAARNP--VRYNGRPRLGTVIELLRATDEL-----------------ARRLGEVTIPFLVVHGSADE------------VTDPEVSRALYEAAASKDKTIKIYDGMLHSMLFGE------PDENIERVRGDILAWLNERCT 323          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: XP_014753211.1 (caffeoylshikimate esterase [Brachypodium distachyon] >KQK15708.1 hypothetical protein BRADI_1g24490v3 [Brachypodium distachyon])

HSP 1 Score: 126.3 bits (316), Expect = 2.500e-25
Identity = 94/319 (29.47%), Postives = 141/319 (44.20%), Query Frame = 0
Query:  130 LYQQTYHPPSLNNETLKGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQL-HIAHAVADLCDQYGALSL--GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKW----VISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGM-RVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLL-GEGGXXXXXXXXXXRVWGDIVDWLNARCT 440
            L+ + + P +      + +VFMVH YG+  SW  +  AV L + G+   + DL GHGRS GLR  +  +  AVADL   + ++     +A  PCFL GE +G A+    +L      W G ++++P      R+RPP W    +++L+ RF   L   P+VP   L    +     R     NP  ++ +G  R+ T+   L   DE+                      E++ P L++ G  D+                     LYE + S DK + +Y GM H +L GE            RV GDI+ WLN RCT
Sbjct:   47 LFTRAWRPAAAGGTPPRALVFMVHGYGNDISWTFQSTAVFLARSGFACFAADLPGHGRSHGLRAFVPALEPAVADLLAFFRSVKQREEHAGLPCFLFGESMGGAICLLIHLRTPPGEWTGAVLVAPMCRISDRIRPP-WPLPQILTLVARFAPTL---PIVPTADLIEKSVKVPAKRLVSARNP--MRYNGRPRLGTVTELLRATDEL-----------------GARLGEVSVPFLVVHGSADE------------VTDPAVSRALYEAAASKDKTLKMYDGMLHSMLFGE------PDENIERVRGDILAWLNERCT 324          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: XP_004958048.1 (caffeoylshikimate esterase [Setaria italica] >KQL26273.1 hypothetical protein SETIT_030452mg [Setaria italica])

HSP 1 Score: 125.9 bits (315), Expect = 3.200e-25
Identity = 93/300 (31.00%), Postives = 132/300 (44.00%), Query Frame = 0
Query:  146 KGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQL-HIAHAVADLCDQYGALSL--GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLG-KAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGM-RVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLL-GEGGXXXXXXXXXXRVWGDIVDWLNARCT 440
            K +VFMVH YG+  SW  +  AV L + G+   + DL GHGRS GLR  +  +  AVADL   + A+     +A  PCFL GE +G A+    +L      W G ++++P      R+RPP W +  +  F  R    A +VP   L    +     R     NP  ++ +G  R+ T++  L   DE+                      E+T P L++ G  D+                     LYE + S DK + +Y GM H LL GE            RV GDI+ WLN +CT
Sbjct:   62 KALVFMVHGYGNDISWTFQSTAVFLARSGFACFAADLPGHGRSHGLRAFVPDLDAAVADLLAFFRAVRAREEHAGLPCFLFGESMGGAICLLIHLRTPPEEWAGAVLVAPMCRISDRIRPP-WPLPEILTFVARFAPTAAIVPTADLIEKSVKVPAKRVIAARNP--VRYNGRPRLGTVVELLRATDEL-----------------AKRLGEVTIPFLVVHGSADE------------VTDPEVSRALYEAAASKDKTIKIYDGMLHSLLFGE------LDENIERVRGDILAWLNEKCT 323          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: NP_001345653.1 (uncharacterized protein LOC100193405 [Zea mays] >AQK93044.1 alpha/beta-Hydrolases superfamily protein [Zea mays])

HSP 1 Score: 125.2 bits (313), Expect = 5.500e-25
Identity = 94/328 (28.66%), Postives = 145/328 (44.21%), Query Frame = 0
Query:  113 LDVQHSDRFLVSRRGQALYQQTYHPPSLNNETLKGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQLHIAHAVADLCDQYGALSL---GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGMRVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLLGEGGXXXXXXXXXXRVWGDIVDWLNAR 438
            +DV++ + ++ + RG  L+   + P   +  T K +VF+ H YG   S F+R   + L   GYGV  ID EGHG+S G R  +H   ++   CD +        GY     FL GE +G A+A   +  +   +WDG ++++P      +++P   V++LL + E  + K  +VP   +      + V R+++ +N   I Q   R+ T L  L T            S+D        +  E+  P L+L GE D                      LYER+ S DK M +YPGM H     G            V+ DIV WL+ R
Sbjct:    2 MDVEYHEEYVRNARGVQLFTCVWLPAPSSAPT-KALVFLCHGYGMECSDFMRACGMKLATAGYGVFGIDYEGHGKSMGARCYIHKFESLVADCDMFFKSICDMEGYRNKSRFLYGESMGGAVALLLH-RKDPTFWDGAVLVAPMCKISEKVKPHPVVVTLLTQVEEIIPKWKIVPTKDVIDSAFKDPVKREKIRKNT-LIYQDKPRLKTALELLRT------------SMDVED-----SLSEVRMPFLVLHGEAD------------AVTDPEVSRALYERAASADKTMKLYPGMWH-----GLTAGEPDDNVELVFSDIVSWLDKR 292          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: PUZ72516.1 (hypothetical protein GQ55_2G399800 [Panicum hallii var. hallii])

HSP 1 Score: 124.8 bits (312), Expect = 7.100e-25
Identity = 91/298 (30.54%), Postives = 129/298 (43.29%), Query Frame = 0
Query:  146 KGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQL-HIAHAVADLCDQYGALSL--GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGM-RVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLL-GEGGXXXXXXXXXXRVWGDIVDWLNARC 439
            K +VFMVH YG+  SW  +  AV L + G+   + DL GHGRS GLR  +  +  AVADL   + A+     +A  PCFL GE +G A+    +L      W G ++++P      R+RPP  +  +L  F      A +VP   L    +     R     NP  ++ +G  R+ T++  L   DE+                      E+T P L++ G  D+                     LYE + S DK + +Y GM H LL GE            RV GDI+ W N RC
Sbjct:   66 KALVFMVHGYGNDVSWTFQSTAVFLARSGFACFAADLPGHGRSHGLRAFVPDLDAAVADLLAFFRAVRAREEHAGLPCFLFGESMGGAICLLIHLRTRPDEWAGAVLVAPMCRISDRIRPPWPLPEILTFFARFAPTAAIVPTADLIEKSVKVPAKRVIAARNP--VRYNGRPRLGTVIELLRATDEL-----------------AKRLGEVTVPFLVVHGSADE------------VTDPEVSRALYEAAASKDKTIKIYDGMLHSLLFGE------PDENIERVRGDILAWFNERC 326          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: EEC79070.1 (hypothetical protein OsI_19653 [Oryza sativa Indica Group])

HSP 1 Score: 124.4 bits (311), Expect = 9.300e-25
Identity = 92/332 (27.71%), Postives = 146/332 (43.98%), Query Frame = 0
Query:  114 DVQHSDRFLVSRRGQALYQQTYHPPSLNNETLKGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQLHIAHAVADLCDQY--GALSLG-YAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGMRVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLLGEGGXXXXXXXXXXRVWGDIVDWLNARCTKKD 443
            DV++ + F+ + RG  L+   + P S    + K ++F+ H YG   S F++   V L   GYGV  ID EGHG+S G R  +     + D CD++      LG Y     FL GE +G A+A   +  +   +WDG ++++P      +++P   V++LL + E  + K  +VP   +      + + R+++ +N   I Q   R+ T L  L T   V                   +  +++ P  IL GE D                      LYER+ S DK + +YPGM H     G            V+ DIV WL+ R  ++D
Sbjct:    4 DVEYHEEFVTNPRGLRLFTCGWLPAS---SSPKALIFLCHGYGMEVSGFMKACGVELATAGYGVFGIDYEGHGKSMGARCYIQKFEHLVDDCDRFFKSICELGEYRDKSRFLYGESMGGAVALLLH-RKDPTFWDGAVLVAPMCKISEKVKPHPLVVTLLTQVEEIIPKWKIVPTKDVIDSAFKDPIKREKIRKNK-LIYQDKPRLKTALELLRTSISVEQ-----------------SLSQVSMPFFILHGEAD------------TVTDPEVSRALYERAASADKTIKLYPGMWH-----GLTAGEPDHNVHLVFSDIVAWLDRRSHRQD 296          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: GAQ87214.1 (Monoacylglycerol Lipase [Klebsormidium nitens])

HSP 1 Score: 123.2 bits (308), Expect = 2.100e-24
Identity = 98/344 (28.49%), Postives = 146/344 (42.44%), Query Frame = 0
Query:  101 LPHKRCSAASLPLDVQHSDRFLVSRRGQALYQQTYHPPSLNNETLKGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQL-HIAHAVADLCDQYGALSL--GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGMRVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLLGEGGXXXXXXXXXXRVWGDIVDWLNARCTKK 442
            LP K+ +   L   V+ +++F  + RG   + + + P    N     VV   H YGD  ++F    AV L Q GY VV +D EGHG+S GL   +   +  V D  + + ++     +A  P FL GE +G A+A      + G+ WDG+I+++P      ++RPP  +  LLRR    +   P+VP   +  +       R E   NP     H  R+ T +  L   +++  H                  +E+T P L++ G  D                      LYERS S DK   +Y GM H L  EG            V  DI+ WL+ R  KK
Sbjct:   37 LPFKKDAEYYLRKGVRVTEKFFFNSRGIEQFTKEWVPA---NGEASAVVCYCHGYGDQCNYFFDATAVELAQAGYAVVGVDYEGHGQSQGLHCYIPKFSVIVEDTREYFQSVRARPEFAGKPGFLYGESMGGAVAINVSRAEQGK-WDGMILVAPMCKIADKIRPPWIIQELLRRTAFLVPTLPIVPAEDIAENAFKLPEKRAEGKANPTAF-LHKPRLGTAVQLLLVSEDIEKH-----------------LDEVTTPFLLMHGAAD------------LVTDPEVSKALYERSSSKDKTFKLYEGMWHALT-EGEPSENVAI----VMRDIITWLSERSGKK 341          
BLAST of NO04G04770 vs. NCBI_GenBank
Match: PAN14481.1 (hypothetical protein PAHAL_B04343 [Panicum hallii])

HSP 1 Score: 123.2 bits (308), Expect = 2.100e-24
Identity = 92/299 (30.77%), Postives = 130/299 (43.48%), Query Frame = 0
Query:  146 KGVVFMVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQL-HIAHAVADLCDQYGALSL--GYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIMLSPTLAFPPRLRPPKWVISLLRRFEHRLG-KAPLVPWGQLYLDLLPESVTRQEVLENPFFIKQHGM-RVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTFEELTAPILILQGEEDQFHGGRGXXXXXXXXXXXXXXELYERSKSLDKDMVVYPGMSHCLL-GEGGXXXXXXXXXXRVWGDIVDWLNARC 439
            K +VFMVH YG+  SW  +  AV L + G+   + DL GHGRS GLR  +  +  AVADL   + A+     +A  PCFL GE +G A+    +L      W G ++++P      R+RPP W +  +  F  R    A +VP   L    +     R     NP  ++ +G  R+ T++  L   DE+                      E+T P L++ G  D+                     LYE + S DK + +Y GM H LL GE            RV GDI+ W N RC
Sbjct:   64 KALVFMVHGYGNDVSWTFQSTAVFLARSGFACFAADLPGHGRSHGLRAFVPDLDAAVADLLAFFRAVRAREEHAGLPCFLFGESMGGAICLLIHLRTRPDEWAGAVLVAPMCRISDRIRPP-WPLPEILTFVARFAPTAAIVPTADLIEKSVKVPAKRVIAARNP--VRYNGRPRLGTVIELLRATDEL-----------------AKRLGEVTVPFLVVHGSADE------------VTDPEVSRALYEAAASKDKTIKIYDGMLHSLLFGE------PDENIERVRGDILAWFNERC 324          
The following BLAST results are available for this feature:
BLAST of NO04G04770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28881.11.100e-12171.33hypothetical protein Naga_100095g15 [Nannochlorops... [more]
XP_005853924.11.800e-7668.57alpha beta-hydrolase domain-containing protein, pa... [more]
OEL25981.11.400e-2531.00Caffeoylshikimate esterase [Dichanthelium oligosan... [more]
XP_014753211.12.500e-2529.47caffeoylshikimate esterase [Brachypodium distachyo... [more]
XP_004958048.13.200e-2531.00caffeoylshikimate esterase [Setaria italica] >KQL2... [more]
NP_001345653.15.500e-2528.66uncharacterized protein LOC100193405 [Zea mays] >A... [more]
PUZ72516.17.100e-2530.54hypothetical protein GQ55_2G399800 [Panicum hallii... [more]
EEC79070.19.300e-2527.71hypothetical protein OsI_19653 [Oryza sativa Indic... [more]
GAQ87214.12.100e-2428.49Monoacylglycerol Lipase [Klebsormidium nitens][more]
PAN14481.12.100e-2430.77hypothetical protein PAHAL_B04343 [Panicum hallii][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009299NSK009299Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04770.1NO04G04770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579668gene_2264Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100095g15gene1735Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04770.1NO04G04770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04770 ID=NO04G04770|Name=NO04G04770|organism=Nannochloropsis oceanica|type=gene|length=2540bp
GTGGGCTGCTGGTGGTCTTCCTGTCCGTGTACATAAAGAGGCAACGTTGG
AAAGAGAGAATGAGTCATGCTGGGGACAGTGGTGAAGTATCTCCTGTACT
CCCAAGGCGCCCTCCGGAGGCGTCTGACTGGCTGCTCGATCACTAATTTT
CGTCCCACCAGCAGTCGCTGCATGTTCGCCGGCCTGCGGTTAACTGTAAG
ATATCACTGGCTTGTTTTTAGGGAAAGGCCTGCGGGGCATGGTGGTCAAC
CAGGCCTGTTAAGCCGCGGTGTGTGTGTGCAAGACCAAGAGAAAAGCAGG
GAGATCCACTCGCTCCCCACAAAAAGTGGGGAAGAAGTGTTGCGTTTCTC
ATACCAAGCACCAGGGGCTCCACCATCGGTGGTCAAGTGGCAGGTCCGCG
CGTTTGTCCACGACAATGATACGAGCACGAGGATGCTAGCTGACACAACT
TGCACATCATTTGCTTCGGTTTTGGTGTGCTCTACGCCTGCAGTCTCGAC
CGACAAGCAACCGCTCTCCTTCAACCCACAACCGTCTGCCTGCTTGCTAC
TTGTTCCACACAACCTCTCCATTCCATCACTCTCATCAGTGCGTCACGTA
CCGACGATAAACCTATCCATAATACATTCTACATGCTCAGGCTTCGATAT
TTGGAGCAGCCGGGACCATGCAGCAGTTCTATCGGTCGGCGGCTAGAGCC
GGAGGGGCGTGGCGGAGGGCACCAGCATCGTCATCACTAGCATCACATCC
CCTCCTTCTCACAGCCGCCGCCTCCTCGCACGCCTCCTTCCGGGTCGTCA
CGCCCTCCTTTTCAGCCTTCGCCTCCGCGAGAATAAATACTTCGACCATC
ACTGGCTCCTCCTCCCTCCCCATGCCTCCCTCTTCCTCCTCTTCCTCTTC
CTCCTCCTCCTCCTCCCCTCTCACCGAGCCCTCCACCACATACGGCGATG
ATCGTCGTCTCTACCCTCTCCCGCACAAGCGCTGTTCCGCCGCCTCACTA
CCCCTGGACGTACAGCATTCAGATCGCTTTCTCGTCTCGCGGCGCGGCCA
AGCCCTTTATCAACAAACGTATCACCCACCGTCCTTGAACAACGAGACAC
TGAAAGGCGTAGTATTCATGGTGCACGATTACGGTGATCACTCCTCCTGG
TTCTTAAGGGATCTGGCCGTAGTACTTTGCCAGCAGgttggagagagaga
aagagggggggggagggaatggggggaggatattttgagattctgttgtt
ggatccattttttgcctcgtctcattttcttaccctctctccttccctcc
cttcatccctccctcccttcccccttcttttgtagGGCTATGGCGTTGTA
TCAATCGATTTGGAGGGACACGGGCGCAGCGACGGTTTGCGCGGTCAGCT
GCACATAGCCCATGCCGTTGCCGACCTGTGCGATCAGTATGGCGCCCTCT
CCCTCGGATACGCCGCCACGCCGTGCTTCCTCCTGGGGGAAGGGCTAGGG
GCGGCACTAGCCTACAAGACCTATCTGATGCAAGGGGGCAGGTACTGGGA
CGGAGTGATCATGCTCTCCCCTACACTGGCGTTCCCACCGCGATTGAGAC
CTCCCAAATGGGTGATCAGgtactgagggcgggagggagggcgggaagga
gggagggagggaaaaaatgtattgggattagtctgtgaaactcataatga
agcacgaatgtactcaccgacccacctttccctccctccctccctccctc
cctccctccctccctccctccgcagTCTCCTGCGTCGCTTCGAGCATCGG
CTGGGCAAAGCGCCCCTCGTGCCCTGGGGTCAGCTCTACCTTGACCTCCT
CCCGGAGTCCGTCACTCGCCAAGAGGTCCTCGAGAACCCCTTTTTCATCA
AGCAGCATGGCATGCGCGTCTCCACCCTCCTGCACACCCTGTCGACCTTG
GACGAGGTCTACCTCCACGCACCGACCCCCTCCTCCCTCGATCCCCCTCC
CCCGCCCTCCGTATGCACGTTTGAAGAGCTGACGGCACCGATCCTGATAT
TGCAAGGGGAGGAGGATCAATTCCATGGAGGGAGGGGGGGAGGCAGGGAG
GGAGGGAGGGAGGGAGGGCGGGTGGCGCGGGAACTATATGAGCGAAGCAA
AAGTCTGGACAAGGACATGGTGGTATATCCGGGTATGTCTCATTGTTTGT
TGGGGGAGGGAGGGGGGGAGGGAGGGAGGGAGGGAGGAAAGGAAAGAGTG
TGGGGGGATATTGTGGATTGGTTGAATGCGCGGTGTACGAAAAAGGATGG
AGGGGGGGGAGCGGGGGAGGGGGGGAGGAGGGGGGGAGAGGGGCACGGAG
GAAGAGGAGGACGAGTTGGAGCGGGTACATAGGCCATAGGTAGATAGGTA
TATAGGTAGATAGGTAGGTAGATAGATAGATAGATAGATAGACAGGGAGA
GAGAGTGGCAGTTGAAATATTACACGATAAATGAATTAAAACAATGTGGG
GTGGCAAAGGGCGTATCTGAAGCAAAACACACCTACAGCT
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protein sequence of NO04G04770.1

>NO04G04770.1-protein ID=NO04G04770.1-protein|Name=NO04G04770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MQQFYRSAARAGGAWRRAPASSSLASHPLLLTAAASSHASFRVVTPSFSA
FASARINTSTITGSSSLPMPPSSSSSSSSSSSSPLTEPSTTYGDDRRLYP
LPHKRCSAASLPLDVQHSDRFLVSRRGQALYQQTYHPPSLNNETLKGVVF
MVHDYGDHSSWFLRDLAVVLCQQGYGVVSIDLEGHGRSDGLRGQLHIAHA
VADLCDQYGALSLGYAATPCFLLGEGLGAALAYKTYLMQGGRYWDGVIML
SPTLAFPPRLRPPKWVISLLRRFEHRLGKAPLVPWGQLYLDLLPESVTRQ
EVLENPFFIKQHGMRVSTLLHTLSTLDEVYLHAPTPSSLDPPPPPSVCTF
EELTAPILILQGEEDQFHGGRGGGREGGREGGRVARELYERSKSLDKDMV
VYPGMSHCLLGEGGGEGGREGGKERVWGDIVDWLNARCTKKDGGGGAGEG
GRRGGEGHGGRGGRVGAGT*
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Synonyms
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