NO04G04700, NO04G04700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_003566857.1 (rhomboid-like protein 20 [Brachypodium distachyon] >KQK03831.1 hypothetical protein BRADI_2g10080v3 [Brachypodium distachyon]) HSP 1 Score: 136.0 bits (341), Expect = 2.200e-28 Identity = 99/331 (29.91%), Postives = 148/331 (44.71%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G ++GF NAPVT+ L S++ S + AL L I++ +WR+ S AFQ P+ + G +LLY FR FERQ+GS K+ F + + +++ + + K LASGP+G ++ F+ F+ +P + +FGV+ SDKS+ Y G QLLL + IP +CGL+AG LYR NVLGI+++ LP ++ A +P P + P G P A E +I ML+ +GF+ A +AL A N++ VA N LL Sbjct: 4 GGVSGFQNAPVTRAVVLASGLLSVVFSANRRARALGLSYQEIVKNFRLWRIFASVFAFQSTPELIFGLYLLYYFRVFERQIGSNKYSVFSLFTISVSSLLQILSLVLL------KDSNYISALASGPYGLIFGSFIPFFLDIPITS--RFRIFGVNFSDKSIIYLAGLQLLLSSWKRSLIPGICGLVAGSLYRLNVLGIRRMKLPQIIASFFARFFAP-----PPGSSSRPSRSLVGNMSSHTGRAVQNQPSTGS---------------------------------APVAEPPESSIAMLVSMGFDANAARQALMRARNDINVATNILL 288
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_006645750.1 (PREDICTED: rhomboid-like protein 20 [Oryza brachyantha]) HSP 1 Score: 136.0 bits (341), Expect = 2.200e-28 Identity = 80/218 (36.70%), Postives = 120/218 (55.05%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSP 220 G ++GF NAPVT+ L S++ S + AL L I++ +WR+ TS AFQ P+ + G +LLY FR FERQ+GS K+ F + + ++ E + K LASGP+G ++A F+ F+ +P + +FGV+ +DKS Y G QLLL G + IP +CGL+AG LYR NVLGI+++ +P ++ A +P Sbjct: 3 GGVSGFQNAPVTRAVVLASGLLSVVFSAQRRARALGLSYQGIVKNFRLWRIFTSGFAFQSTPELLFGMYLLYYFRVFERQIGSNKYSVFSLFTIAVSLLLEILSLVLL------KDTNYLSTLASGPYGLIFASFIPFFLDIPVTS--RFRIFGVNFTDKSFIYLAGLQLLLSSGKRSLIPGICGLIAGSLYRLNVLGIRRIKMPQIIASFFARFFAP 212
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_002900599.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY59914.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 136.0 bits (341), Expect = 2.200e-28 Identity = 112/338 (33.14%), Postives = 153/338 (45.27%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAI---AAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPA--PASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLLAG 335 G L GF APVT + L V AS S G L LD IL + + WRL++SQL F LG + ++ FR ERQ+GSRKFGS LV L++ + + A + W+ + + GP+ + A V F +PKL+P+ V+G+ SDKS Y + +L + IP + G G+L+R LG ++ LP VC L +L P+ + A PGA P Q G +P A P SE+AI+ LM LGF+R ++ALQ DNNVE AANRLL G Sbjct: 3 GDLRGFYGAPVTYAFSLAVGAASSASLLLDRGHLLALDRDAILSRSQYWRLISSQLTFHHGLAVSLGLYTVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSSPWLAKT-----------IPGGPYPIIGAFAVYFNKFIPKLHPRSFSVWGLHFSDKSSTYML-MLVLFVRDFRALIPFMGGSFLGLLFRSTPLG--RLQLPSFVCSIL-GLLHPLFKVVPASTLALQRQRRALEAQRRVNARFNRRPGA--PAVQ-GQGFRDQLLPGAGGAMPGGAPAAGGMLLPHMAAQPPSEDAIQQLMALGFDRERALQALQTTDNNVEAAANRLLNG 322
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_009116375.1 (PREDICTED: rhomboid-like protein 20 [Brassica rapa]) HSP 1 Score: 136.0 bits (341), Expect = 2.200e-28 Identity = 101/331 (30.51%), Postives = 142/331 (42.90%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G +GF NAPVTK + + ++L L L I K IW+L+TS F P+ + G +LLY FR FERQ+GS K+ F++ S L+ E + + + + +L SGP+G ++A F+ FY +P VFGV+ SDKS Y G QLLL + IP +CG++AG LYR N+LGI+K P V + + P + P + P A SEEAI L+ +GF+R A +AL A N+V A N LL Sbjct: 3 GGPSGFHNAPVTKAFVITSALFTVLFGIQGRSSKLGLSYQDIFEKFRIWKLITSSFVFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTLSLLLEVTLLSLLKDTTEN-------LLTSGPYGLIFASFIPFYLDIPV--STRFRVFGVNFSDKSFIYLAGLQLLLSSWKRSIIPGVCGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSLPSFSSSSPPTPSRNIVGTISPNTVRRAERSQPAPMASS------------------------------------VEPSEEAIATLVSMGFDRNAARQALVHARNDVNAATNILL 288
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_013663391.1 (rhomboid-like protein 20 isoform X1 [Brassica napus]) HSP 1 Score: 136.0 bits (341), Expect = 2.200e-28 Identity = 101/331 (30.51%), Postives = 142/331 (42.90%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G +GF NAPVTK + + ++L L L I K IW+L+TS AF P+ + G +LLY FR FERQ+GS K+ F++ S L+ E + + + + +L SGP+G ++A F+ FY +P VFGV+ SDKS Y G QLLL + P +CG++AG LYR N+LGI+K P V + + P + P + P A SEEAI L+ +GF+R A +AL A N+V A N LL Sbjct: 3 GGPSGFHNAPVTKAFVITSALFTVLFGIQGRSSKLGLSYQDIFEKFRIWKLITSSFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTLSLLLEVTLLSLLKDTTEN-------LLTSGPYGLIFASFIPFYLDIPV--STRFRVFGVNFSDKSFIYLAGLQLLLSSWKRSIFPGVCGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSLPSFSSSSPPTPSRNIVGTISPNTVRRAERSQPAPMASS------------------------------------VEPSEEAIATLVSMGFDRNAARQALVHARNDVNAATNILL 288
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_015649731.1 (PREDICTED: rhomboid-like protein 20 [Oryza sativa Japonica Group]) HSP 1 Score: 135.6 bits (340), Expect = 2.900e-28 Identity = 106/336 (31.55%), Postives = 160/336 (47.62%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLS-SYTQSGPALTLDLA--RILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWV-GPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTG-RPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G L GF NAPV++ +VV A+L S ++ G L L L+ + K IW+L+TS AF P+ + G LLY FR FERQ+GS K+ F+V ST ++ + A++ GPS L SGP+G ++A ++ F+ +P + K +FG+ +SDKS Y G QLL GW + IP L G++AG+LYR N+ GI+++ LP + L+ P L + +P E + R G P E +I L+ +GF+RG+ +RAL + +V +A+N LL Sbjct: 3 GGLPGFHNAPVSRA---VVVAAALFSVAFGFRGRFLDLGLSYENVYGKLRIWKLITSLFAFSSTPELIFGAALLYYFRVFERQIGSNKYSVFIVFSTAVSVLLQILSLAYLKGPSLN--------PLTSGPYGLIFASYIPFFFDIP-ITTKF-RIFGLRLSDKSFIYLAGLQLLFSSGWRSIIPGLSGILAGLLYRLNIFGIRRLKLPDSMTSLLSRFSCPFLNNSYQRLPVTENDGNIP----------------SNQTRQTEGVH-------------------------PTTEDPMESSIATLVSMGFDRGSAIRALALTNYDVNLASNILL 284
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_015616986.1 (PREDICTED: rhomboid-like protein 20 [Oryza sativa Japonica Group] >BAA88548.1 unknown protein [Oryza sativa Japonica Group] >BAA89569.1 unknown protein [Oryza sativa Japonica Group] >BAF04608.1 Os01g0268800 [Oryza sativa Japonica Group] >BAG93409.1 unnamed protein product [Oryza sativa Japonica Group] >BAG97406.1 unnamed protein product [Oryza sativa Japonica Group] >BAS71487.1 Os01g0268800 [Oryza sativa Japonica Group]) HSP 1 Score: 134.8 bits (338), Expect = 4.900e-28 Identity = 99/331 (29.91%), Postives = 148/331 (44.71%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G ++GF NAPVT+ L S++ S + AL L I++ +W+L S AFQ P+ + G +LLY FR FERQ+GS K+ F + + ++ E + K LA GP+G ++A F+ F+ +P + +FGV+ SDKS Y G QLLL G + IP +CGL+AG LYR NVLGI+++ +P V+ A + +P + G +P + PP E +I ML+ +GF+ A +AL A N++ A N LL Sbjct: 3 GGVSGFQNAPVTRAVVLASGLLSVVFSAQRRARALVLSHQGIVKNFRLWKLFASGFAFQSTPELLFGVYLLYYFRVFERQIGSNKYSVFSLFTISVSLLLEILSLVLL------KDTNYLSTLACGPYGLIFASFIPFFLDIPVTS--RFRIFGVNFSDKSFIYLAGLQLLLSSGKRSLIPGICGLIAGSLYRLNVLGIRRMKMPQVIASFFARIFAP----------------------------------SSGGSSRPSRSLVGNMSSRTSRAVQNNQPSGFAPVVEPP----ESSIAMLVSMGFDGNAARQALMRARNDINTATNILL 287
BLAST of NO04G04700 vs. NCBI_GenBank
Match: CDM82752.1 (unnamed protein product [Triticum aestivum]) HSP 1 Score: 134.8 bits (338), Expect = 4.900e-28 Identity = 102/331 (30.82%), Postives = 147/331 (44.41%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G ++GF NAPVT+ L S++ S + AL L I++ +WR+ S AFQ P+ ++G +LLY FR FERQMGS K+ F + + ++ E + K LASGP+G ++A F+ F+ +P + +FGV+ SDKS Y G QLL+ + IP +CGL+AG LYR NV GI++ LP +V A +P P A R P + PP E +I ML+ +GF+ A +AL A N++ VA N LL Sbjct: 4 GGVSGFHNAPVTRAIVLASGLLSVVFSVNRRARALGLSYQDIIKNFRVWRIFASLFAFQSTPELMVGLYLLYYFRVFERQMGSNKYSVFSLFAIAVSLPLEILSLVLL------KDTNYITALASGPYGLIFASFIPFFLDIPITS--RFRIFGVNFSDKSFIYLAGLQLLVSSWKRSLIPGICGLIAGSLYRLNVFGIRRRKLPQIVASFFARFFAP--------------------------------PSASSSR--PSRSLVGNVPSHTGRTVQNQPSTGFAPVVEPP----ESSIAMLVSMGFDSNAARQALVRARNDINVATNILL 288
BLAST of NO04G04700 vs. NCBI_GenBank
Match: OAP04932.1 (hypothetical protein AXX17_AT3G51330 [Arabidopsis thaliana]) HSP 1 Score: 134.8 bits (338), Expect = 4.900e-28 Identity = 102/332 (30.72%), Postives = 145/332 (43.67%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVL-QTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G +GF NAPVTK + + ++ L L I K IW+L+ S AF P+ + G +LLY FR FERQ+GS K+ F++ S ++ E + + + + +L SGP+G ++A F+ FY +P VFGV+ SDKS Y G QLLL + P +CG++AG LYR N+LGI+K P V + + P + P P + G R QP +P SEEAI L+ +GF+R A +AL A N+V A N LL Sbjct: 219 GGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTAN-------LLTSGPYGLIFASFIPFYLDIPV--STRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSSN------------IVGTISPNTGRRAERSQPA-------------------------PLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILL 504
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_020186606.1 (rhomboid-like protein 20 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 134.8 bits (338), Expect = 4.900e-28 Identity = 103/331 (31.12%), Postives = 146/331 (44.11%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G ++GF NAPVT+ L S++ S + AL L I++ +WR+ S AFQ P+ + G +LLY FR FERQMGS K+ F + + ++ E + K LASGP+G ++A FV F+ +P + +FGV+ SDKS Y G QLL+ + IP +CGL+AG LYR NV GI++ LP +V A +P P A R P + PP E +I ML+ +GF+ A +AL A N++ VA N LL Sbjct: 4 GGVSGFHNAPVTRAIVLASGLLSVVFSVNRRARALGLSYQDIIKNFRVWRIFASVFAFQSTPELMFGLYLLYYFRVFERQMGSNKYSVFSLFAIAVSLPLEILSLVLL------KDTNYITALASGPYGLIFASFVPFFLDIPITS--RFRIFGVNFSDKSFIYLAGLQLLVSSWKRSLIPGICGLIAGSLYRLNVFGIRRRKLPQIVASFFARFFAP--------------------------------PSASSSR--PSRSLVGNVPSHTGRTVQNQPSTGFSPVVEPP----ESSIAMLVSMGFDSNAARQALVRARNDINVATNILL 288 The following BLAST results are available for this feature:
BLAST of NO04G04700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04700 ID=NO04G04700|Name=NO04G04700|organism=Nannochloropsis oceanica|type=gene|length=1194bpback to top protein sequence of NO04G04700.1 >NO04G04700.1-protein ID=NO04G04700.1-protein|Name=NO04G04700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top Synonyms
Publications
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