NO04G04600, NO04G04600 (gene) Nannochloropsis oceanica

Overview
NameNO04G04600
Unique NameNO04G04600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2353
Alignment locationchr4:1251572..1253924 +

Link to JBrowse

Properties
Property NameValue
DescriptionOrnithine mitochondrial-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1251572..1253924 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016597amino acid binding
GO:0016743carboxyl- or carbamoyltransferase activity
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036901Asp/Orn_carbamoylTrfase_sf
IPR006131Asp_carbamoyltransf_Asp/Orn-bd
IPR006132Asp/Orn_carbamoyltranf_P-bd
IPR002292Orn/put_carbamltrans
IPR006130Asp/Orn_carbamoylTrfase
Homology
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_009532124.1 (hypothetical protein PHYSODRAFT_317226 [Phytophthora sojae] >EGZ11791.1 hypothetical protein PHYSODRAFT_317226 [Phytophthora sojae])

HSP 1 Score: 359.0 bits (920), Expect = 2.100e-95
Identity = 184/323 (56.97%), Postives = 240/323 (74.30%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKS-SSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +A+LKG++ M+  +L++ EL GLL+ + + KATY +  + ++ P+PLTG   SMIFQKRSTRTR+S+E GM +LGG  LFL   DIQLGVNE++RDTA VLSRFNS+ILARV+ H D+  L + ++VPV+NALSD YHPLQ LAD LT+ EHFG+   EG   AWVGDGNNVLHD  + A +LG ++++A P GYEPDA+V+ + +  A+  G  ++MT DP+ AV+GANVV TDTW+SMGQEEE +KR++ F G+QV   M+E  A         +FLHCLPRH +EV DEVFY   RSLVF EAENR+WTVMAV  +L+GK
Sbjct:   15 LATLKGQNFMSTAQLSNDELIGLLAKAKEFKATYSNPETKATAPKPLTGEICSMIFQKRSTRTRISSEVGMHLLGGKGLFLSSDDIQLGVNETMRDTALVLSRFNSIILARVYGHKDILELGELATVPVVNALSDKYHPLQMLADYLTVYEHFGK--FEGLTFAWVGDGNNVLHDYMLAAPKLGANIQIATPVGYEPDADVVAETKRLAELAGTKVVMTTDPVEAVKGANVVATDTWISMGQEEESQKRLKAFAGYQVTNKMLESAAEDH------IFLHCLPRHQDEVDDEVFYG-PRSLVFDEAENRLWTVMAVYAALLGK 328
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_008902205.1 (ornithine carbamoyltransferase [Phytophthora parasitica INRA-310] >ETI51895.1 ornithine carbamoyltransferase [Phytophthora parasitica P1569] >ETM51500.1 ornithine carbamoyltransferase [Phytophthora parasitica] >ETN12209.1 ornithine carbamoyltransferase [Phytophthora parasitica INRA-310] >ETO80654.1 ornithine carbamoyltransferase [Phytophthora parasitica P1976])

HSP 1 Score: 358.6 bits (919), Expect = 2.700e-95
Identity = 184/323 (56.97%), Postives = 237/323 (73.37%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSS-SPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +ASLKGK+ M+  EL+  ++  L++ + + KATY    + ++ PRPLTG   SMIFQKRSTRTR+S+E GM +LGG  LFL   DIQLGVNE+L+DTA VLSRFNS+ILARV+ H D+  L + ++VPVINALSD YHPLQ LAD +T++EHF  G  EG   AWVGDGNNVLHD  + A +LG ++++A PEGYEPD +V+++ +  A   G   +MT DP+ AV+GANVV TDTW+SMGQEEE +KR++ F G+QV   M+E  A         +FLHCLPRH +EV DEVFY  +RS+VF EAENR+WTVMAV  SL+GK
Sbjct:   78 LASLKGKNFMSTAELSTEQITALVAKAQEFKATYSDPLTKATAPRPLTGEICSMIFQKRSTRTRISSEVGMHLLGGKGLFLSSDDIQLGVNETLKDTALVLSRFNSIILARVYGHKDILELGELATVPVINALSDKYHPLQMLADYMTVKEHF--GSFEGLTFAWVGDGNNVLHDYMLAAPKLGANIQIATPEGYEPDEDVVEETKRLAALAGTKFLMTTDPVEAVKGANVVSTDTWISMGQEEESQKRLKAFAGYQVTNKMLENAADNH------IFLHCLPRHQDEVDDEVFYG-KRSVVFDEAENRLWTVMAVYASLLGK 391
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: ETK91775.1 (ornithine carbamoyltransferase [Phytophthora parasitica] >ETL45167.1 ornithine carbamoyltransferase [Phytophthora parasitica] >ETL98338.1 ornithine carbamoyltransferase [Phytophthora parasitica] >ETP21711.1 ornithine carbamoyltransferase [Phytophthora parasitica CJ01A1] >ETP49580.1 ornithine carbamoyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 358.6 bits (919), Expect = 2.700e-95
Identity = 184/323 (56.97%), Postives = 237/323 (73.37%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSS-SPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +ASLKGK+ M+  EL+  ++  L++ + + KATY    + ++ PRPLTG   SMIFQKRSTRTR+S+E GM +LGG  LFL   DIQLGVNE+L+DTA VLSRFNS+ILARV+ H D+  L + ++VPVINALSD YHPLQ LAD +T++EHF  G  EG   AWVGDGNNVLHD  + A +LG ++++A PEGYEPD +V+++ +  A   G   +MT DP+ AV+GANVV TDTW+SMGQEEE +KR++ F G+QV   M+E  A         +FLHCLPRH +EV DEVFY  +RS+VF EAENR+WTVMAV  SL+GK
Sbjct:   39 LASLKGKNFMSTAELSTEQITALVAKAQEFKATYSDPLTKATAPRPLTGEICSMIFQKRSTRTRISSEVGMHLLGGKGLFLSSDDIQLGVNETLKDTALVLSRFNSIILARVYGHKDILELGELATVPVINALSDKYHPLQMLADYMTVKEHF--GSFEGLTFAWVGDGNNVLHDYMLAAPKLGANIQIATPEGYEPDEDVVEETKRLAALAGTKFLMTTDPVEAVKGANVVSTDTWISMGQEEESQKRLKAFAGYQVTNKMLENAADNH------IFLHCLPRHQDEVDDEVFYG-KRSVVFDEAENRLWTVMAVYASLLGK 352
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: KUF84144.1 (Ornithine carbamoyltransferase [Phytophthora nicotianae])

HSP 1 Score: 358.6 bits (919), Expect = 2.700e-95
Identity = 184/323 (56.97%), Postives = 237/323 (73.37%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSS-SPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +ASLKGK+ M+  EL+  ++  L++ + + KATY    + ++ PRPLTG   SMIFQKRSTRTR+S+E GM +LGG  LFL   DIQLGVNE+L+DTA VLSRFNS+ILARV+ H D+  L + ++VPVINALSD YHPLQ LAD +T++EHF  G  EG   AWVGDGNNVLHD  + A +LG ++++A PEGYEPD +V+++ +  A   G   +MT DP+ AV+GANVV TDTW+SMGQEEE +KR++ F G+QV   M+E  A         +FLHCLPRH +EV DEVFY  +RS+VF EAENR+WTVMAV  SL+GK
Sbjct:   17 LASLKGKNFMSTAELSTEQITALVAKAQEFKATYSDPLTKATAPRPLTGEICSMIFQKRSTRTRISSEVGMHLLGGKGLFLSSDDIQLGVNETLKDTALVLSRFNSIILARVYGHKDILELGELATVPVINALSDKYHPLQMLADYMTVKEHF--GSFEGLTFAWVGDGNNVLHDYMLAAPKLGANIQIATPEGYEPDEDVVEETKRLAALAGTKFLMTTDPVEAVKGANVVSTDTWISMGQEEESQKRLKAFAGYQVTNKMLENAADNH------IFLHCLPRHQDEVDDEVFYG-KRSVVFDEAENRLWTVMAVYASLLGK 330
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_024573237.1 (ornithine carbamoyltransferase [Plasmopara halstedii] >CEG36868.1 ornithine carbamoyltransferase [Plasmopara halstedii])

HSP 1 Score: 357.1 bits (915), Expect = 7.900e-95
Identity = 185/323 (57.28%), Postives = 237/323 (73.37%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSS-SPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +ASLKG++ M+  +L+  +L GLL+ + + KATY    + ++ PRPLTG   SMIFQKRSTRTR+S+E GM +LGG  LFL   DIQLGVNE+L+DTA VLSRFNSLILARV+ H D+  L + +SVPVINALSD YHPLQ LAD +T+ EHF  G ++G   AWVGDGNNVLHD  + A +LG ++++A P GYEPD +V+ + +  A   G  ++MT DP+ AV+GANV+ TDTW+SMGQEEE +KR++ F G+QV   M+E  A         +FLHCLPRH +EV DEVFY  +RSLVF EAENR+WTVMAV  SL+GK
Sbjct:   17 LASLKGQNFMSTAQLSTEQLTGLLAKAQEFKATYSDPLTKATAPRPLTGEVCSMIFQKRSTRTRISSEVGMHLLGGKGLFLSSDDIQLGVNETLQDTALVLSRFNSLILARVYGHDDIVELGELASVPVINALSDKYHPLQMLADYMTVTEHF--GSIKGLTFAWVGDGNNVLHDYMLAAPKLGANIQIATPLGYEPDEDVVAETKRLAAMAGTKIVMTSDPIQAVKGANVIATDTWISMGQEEETQKRLKAFAGYQVTTKMLEHAAENH------IFLHCLPRHQDEVDDEVFYG-KRSLVFDEAENRLWTVMAVYASLLGK 330
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: OWZ07954.1 (Ornithine carbamoyltransferase [Phytophthora megakarya])

HSP 1 Score: 357.1 bits (915), Expect = 7.900e-95
Identity = 180/323 (55.73%), Postives = 242/323 (74.92%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKS-SSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +ASLKG++ M+  +L+   + GL++ + + KA+Y +  + ++ P+PLTG   SMIFQKRSTRTR+S+E GM +LGG  LFL   DIQLGVNE+L+DTA VLSRFNS+ILARV+ H D+  L + ++VPVINALSD +HPLQ LAD +T++EHFG+  +EG   AWVGDGNNVLHD  + A +LG ++++A PEGYEPD +V+++ +  A   G +++ T DP+ AV+GANV+ TDTW+SMGQEEE +KR++ F G+QV   M+EK A         +FLHCLPRH +EV DEVFY  +RSLVF EAENR+WTVMAV  SL+GK
Sbjct:   35 LASLKGQNFMSTADLSSDHISGLVAKAQEFKASYSNPETKATAPKPLTGEICSMIFQKRSTRTRISSEVGMHLLGGKGLFLSSDDIQLGVNETLKDTALVLSRFNSIILARVYGHQDILELGELATVPVINALSDKFHPLQMLADYMTVQEHFGK--IEGLTFAWVGDGNNVLHDYMLAAPKLGANIQIATPEGYEPDQDVVEETKRLAALAGTTVVTTTDPVEAVKGANVIATDTWISMGQEEESQKRLKAFAGYQVTNKMLEKAADDH------IFLHCLPRHQDEVDDEVFYG-KRSLVFDEAENRLWTVMAVYASLLGK 348
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: OEU18855.1 (ornithine carbamoyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 355.1 bits (910), Expect = 3.000e-94
Identity = 178/270 (65.93%), Postives = 219/270 (81.11%), Query Frame = 0 
Query:  165 MIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            MIFQKRSTRTRVS+ETGMA+LGGHALFLGP DIQLGVNES++DTA+VLSRFN +ILARVFAH D+  LAK+SSVP+INALSDL+HPLQ LADL+ L++HFG+  + GK +AWVGDGNNVLHDL +G++++GM+V++A P GYE D ++M K    A++ G +L  T     AV+GA+VVVTDTWVSMGQE+EYEKR+++F+G+QVN  +M K         G VFLHCLPRH EEVTDEV Y  + SLVF EAENRMWTVMAVM + +GK
Sbjct:    1 MIFQKRSTRTRVSSETGMALLGGHALFLGPSDIQLGVNESMKDTASVLSRFNDIILARVFAHNDITELAKYSSVPIINALSDLHHPLQTLADLMALQQHFGK-DLSGKTVAWVGDGNNVLHDLMLGSLKMGMNVQIATPAGYECDPDIMAKSVVLAKKNGATLTTTNVAEDAVKGADVVVTDTWVSMGQEDEYEKRVKEFDGYQVNTELMGK------ANDGAVFLHCLPRHVEEVTDEVIY-SDASLVFNEAENRMWTVMAVMAAQMGK 262
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_013401194.1 (ornithine carbamoyltransferase, mitochondrial isoform X1 [Lingula anatina])

HSP 1 Score: 348.6 bits (893), Expect = 2.800e-92
Identity = 176/324 (54.32%), Postives = 236/324 (72.84%), Query Frame = 0 
Query:  109 AFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLV 433
            A  G   L G+H + + +   SE+  LL  ++ LK  YK +    + +PL G S++MIFQKRSTRTR+STETGM++LGGHA+FLGP DI LGVNESL+D+A VLSR   ++LARV+   D++ L+K+S+VP+I+ LSD+YHPLQ LAD  TL+EHFG+  ++G  LAWVGDGNNV+H   MG  +LGM + +A P+GY+ D +V +      ++ G S+  TRDPM AV G +VV+TDTW+SMGQE E +KR++DF G++V K MM   AG        +F+HCLPRH EEV+DEVFYDE+RS+V+ EAENR WTVMAVML+L+
Sbjct:   30 ASTGGTDLIGRHFLTLKDYNQSEIEHLLWTASDLKTRYKEN--KEVFQPLIGKSIAMIFQKRSTRTRLSTETGMSLLGGHAVFLGPDDIHLGVNESLQDSAKVLSRMTDVVLARVYGQSDLEELSKYSTVPIISGLSDMYHPLQILADFQTLQEHFGQ--LKGLKLAWVGDGNNVVHSFLMGCPKLGMDLNIATPKGYDVDPKVKEDAVTLVKQSGTSMNFTRDPMEAVAGTDVVITDTWISMGQEAESKKRIKDFMGYEVTKEMM-AAAGPH-----AIFMHCLPRHKEEVSDEVFYDEKRSVVWQEAENRKWTVMAVMLNLL 343
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_013401195.1 (ornithine carbamoyltransferase, mitochondrial isoform X2 [Lingula anatina])

HSP 1 Score: 347.4 bits (890), Expect = 6.300e-92
Identity = 176/323 (54.49%), Postives = 237/323 (73.37%), Query Frame = 0 
Query:  110 FQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLV 433
            F+G   L G+H + + +   SE+  LL  ++ LK  YK +    + +PL G S++MIFQKRSTRTR+STETGM++LGGHA+FLGP DI LGVNESL+D+A VLSR   ++LARV+   D++ L+K+S+VP+I+ LSD+YHPLQ LAD  TL+EHFG+  ++G  LAWVGDGNNV+H   MG  +LGM + +A P+GY+ D +V +      ++ G S+  TRDPM AV G +VV+TDTW+SMGQE E +KR++DF G++V K MM   AG        +F+HCLPRH EEV+DEVFYDE+RS+V+ EAENR WTVMAVML+L+
Sbjct:    2 FRG-TDLIGRHFLTLKDYNQSEIEHLLWTASDLKTRYKEN--KEVFQPLIGKSIAMIFQKRSTRTRLSTETGMSLLGGHAVFLGPDDIHLGVNESLQDSAKVLSRMTDVVLARVYGQSDLEELSKYSTVPIISGLSDMYHPLQILADFQTLQEHFGQ--LKGLKLAWVGDGNNVVHSFLMGCPKLGMDLNIATPKGYDVDPKVKEDAVTLVKQSGTSMNFTRDPMEAVAGTDVVITDTWISMGQEAESKKRIKDFMGYEVTKEMM-AAAGPH-----AIFMHCLPRHKEEVSDEVFYDEKRSVVWQEAENRKWTVMAVMLNLL 313
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: GAX95911.1 (ornithine carbamoyltransferase [Pythium insidiosum])

HSP 1 Score: 345.9 bits (886), Expect = 1.800e-91
Identity = 179/325 (55.08%), Postives = 234/325 (72.00%), Query Frame = 0 
Query:  111 QGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATY-KSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            + + SL+GK  ++  +L+ +E   L++ +   KA Y   S   S P+PL G   SMIFQKRSTRTR+S+E GM +LGG ALFL   DIQLGVNE+L+DTA VLSRFN++ILARV+    V+ L++ +SVPVINALSD YHPLQALAD +T++EHFG+   +G    WVGDGNNVLHD  + A ++G ++R+A P GYEPDA+V+++ Q  A+  G S+ +T DP+ AVEG+NV+ TDTW+SMGQE E +KR+  F G+QV   M+E  A         VFLHCLPRH EEV DEVFY  ++SLVF EAENR+WTVMAV  +L+GK
Sbjct:   37 EALTSLRGKSFLSTAQLSGAEFEALIAQAQHYKAVYGDPSKRGSAPKPLAGDICSMIFQKRSTRTRISSEVGMHLLGGKALFLSSDDIQLGVNETLKDTAKVLSRFNTIILARVYGQDYVEELSELASVPVINALSDKYHPLQALADYMTVKEHFGK--WKGLTFTWVGDGNNVLHDYMLAAPKVGANIRIATPVGYEPDADVLEETQKLAKAAGTSVFVTTDPLEAVEGSNVIATDTWISMGQESEKQKRLDAFAGYQVTTKMLENAADDH------VFLHCLPRHEEEVDDEVFY-SKKSLVFDEAENRLWTVMAVYAALLGK 352
The following BLAST results are available for this feature:
BLAST of NO04G04600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009532124.12.100e-9556.97hypothetical protein PHYSODRAFT_317226 [Phytophtho... [more]
XP_008902205.12.700e-9556.97ornithine carbamoyltransferase [Phytophthora paras... [more]
ETK91775.12.700e-9556.97ornithine carbamoyltransferase [Phytophthora paras... [more]
KUF84144.12.700e-9556.97Ornithine carbamoyltransferase [Phytophthora nicot... [more]
XP_024573237.17.900e-9557.28ornithine carbamoyltransferase [Plasmopara halsted... [more]
OWZ07954.17.900e-9555.73Ornithine carbamoyltransferase [Phytophthora megak... [more]
OEU18855.13.000e-9465.93ornithine carbamoyltransferase [Fragilariopsis cyl... [more]
XP_013401194.12.800e-9254.32ornithine carbamoyltransferase, mitochondrial isof... [more]
XP_013401195.16.300e-9254.49ornithine carbamoyltransferase, mitochondrial isof... [more]
GAX95911.11.800e-9155.08ornithine carbamoyltransferase [Pythium insidiosum... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009327NSK009327Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04600.1NO04G04600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579610gene_2248Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100402g6gene1758Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04600.1NO04G04600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04600 ID=NO04G04600|Name=NO04G04600|organism=Nannochloropsis oceanica|type=gene|length=2353bp
TCTCTTGGGACTGATAAATTGGTACACTTTGTTGTGTGCGGCCGCGATTA
AAGTAAGGACAACAAAGGAGACGCATCGACCAGCACCCTTCTCCTGCAAA
CTCCTTGTTTTGCTCCTAGTGATGGCGGTGAAGGCGACGACAAATTTGCG
TGAGTTGTTGTTTTGTATCTGCTCACCTCGTGTCCCCATCGATTCACTCT
CGTCCGCTTGATCTCGGCTACGGCATGGGCGGCGGCGATCATGCCGCGCG
CTATACTTCGAGACGAAGCCACACTTCGACCGGGCACTCAAGCGCGCCTG
AACGGGCACTTATCTTTTTTGTAATTGTGCATATTCACATCGGCATGCTC
ATTCCGGCACTTATCTTGGTCTCCCTTGTCTTTGTCCTTCAACAAACCAC
AGCCTCCTCCCCAACCCCGTGCCACAAGCCAACAAGACCAAATATGTGGG
CACGCAAGCTCACCCGTCCCTTCACGGCTGCAGGAGCCGTACGATTACAA
GAAGCAGGAGCAGGAAGTGGACTATCGGGTCTTGGAGGGGgtatgtacta
gatttacgttgcctctccgtgtgctgatcttcctctccctcaaccccact
cgatccctgtaacccacacccaccactccacgcacgcgttacagtagcat
ctttttaagcactacttagtgttacttgatatgattcccttcttgccacg
attacatatacaattgctcgctgtacatggataatttgttttcaatcttt
tcctctaccctccctcactctcatgtgtctggaccatgaaagagcgctgt
cgcactcgcaagggcacacacgtatcatctgcgtaacattcatgacatga
cgtccctcaaacctaagacgtttccaggcatgtccacaaaaaataaatga
cgattctcgcggtagatttggttgggcggcttccatgcacgcccttggcc
tgatgtcaatatggcgtggccctcgtggctgtcctccagcaaatgtgaat
atgatatcctcttctgccgtacacagtctgcaatgccatcctcttgaatg
caggccttcgactgagcccctctcgggccccctttgacgctcactctttc
cttctgtccctccctccttcccccctcctttcagCCACCCGCGCCTTCCA
AGGCGTCGCCAGCTTGAAAGGAAAGCACTTGATGAACATCGACGAGCTCA
CGGACAGCGAGCTCCGGGGCCTACTCTCCCTCTCCGCCCAACTCAAAGCC
ACGTACAAGTCCTCCTCCCCTTCCTCCCTCCCTCGCCCCCTGACGGGAAC
ATCCGTGAGCATGATCTTCCAAAAACGGAGCACGCGTACCCGTGTCTCCA
CAGAGACGGGCATGGCTATGCTAGGCGGACATGCCCTTTTTCTTGGTCCA
CAAGACATTCAATTAGGGGTGAACGAGTCCTTGCGTGATACGGCGGCTGT
CCTCTCTCGCTTCAACTCCCTCATCCTGGCCCGAGTGTTTGCGCATCCCG
ACGTGCAAATGCTGGCAAAGCACTCCTCGGTGCCTGTGATCAATGCTCTG
TCCGACTTGTACCACCCACTGCAAGCCCTGGCCGATTTGCTGACCCTGGA
GGAGCACTTCGGGGAGGGCGGGATGGAGGGCAAGGTCCTGGCGTGGGTCG
GTGACGGGAATAACGTCCTCCACGACCTGGCCATGGGCGCAGTGCGGCTG
GGAATGCATGTGCGGGTGGCCTGCCCGGAAGGGTACGAGCCAGACGCGGA
GGTAATGAAGAAGGTGCAAGGCCACGCGCAGAGGAAGGGAGGGTCGTTGA
TGATGACACGAGACCCAATGGCGGCCGTGGAGGGGGCGAATGTGGTGGTG
ACCGATACCTGGGTGAGTATGGGCCAGGAAGAGGAGTACGAGAAGCGGAT
GCGGGACTTTGAGGGTTTTCAGGTCAACAAAGCCATGATGGAGAAGGGGG
CAGGGAAGGAGGGAGGGAAAGCAGGGTGCGTGTTTTTGCATTGTCTCCCT
CGGCATCCGGAGGAGGTGACGGACGAGGTGTTTTATGATGAGGAAAGAAG
TCTGGTCTTCCCCGAGGCGGAGAATCGGATGTGGACGGTCATGGCCGTCA
TGCTTTCGTTGGTGGGGAAGTAGGAAAAAGGATTTAGGGAGGAAGGCAGG
GAGGGGGGACGGGAGGGGAGGAATACGGTGCGGACGGTTATATGTTTCGT
GGATGGGAAATAAGAAAGGGAGGGGAAAAGGGAGGAGGTAGAGATGAGGA
AGAGGACACGAAGAATAAAATTAAATGAAGGAGCCACCCAGTCTTGAGTC
TGTCTACCTTACTGTCGACCGTCAACCATCATCGAATGACAGACGAAACG
GCG
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protein sequence of NO04G04600.1

>NO04G04600.1-protein ID=NO04G04600.1-protein|Name=NO04G04600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MGGGDHAARYTSRRSHTSTGHSSAPERALIFFVIVHIHIGMLIPALILVS
LVFVLQQTTASSPTPCHKPTRPNMWARKLTRPFTAAGAVRLQEAGAGSGL
SGLGGATRAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSS
PSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLG
VNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHP
LQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRV
ACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVS
MGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEV
TDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK*
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Synonyms
Publications