NO04G04580, NO04G04580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04580 vs. NCBI_GenBank
Match: XP_002292111.1 (phosphatidylinositol synthase, partial [Thalassiosira pseudonana CCMP1335] >EED90962.1 phosphatidylinositol synthase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 133.7 bits (335), Expect = 1.300e-27 Identity = 85/214 (39.72%), Postives = 115/214 (53.74%), Query Frame = 0 Query: 81 TSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHW--FHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQL 293 T+ + Y+PNLIGY+RVI TL SL L + W + LY +F D DG AR GQ S FGG+LDMVTDR +TAGL + L E F + L +LDISSHW + + +HHKSAE G+ F+++WYY P F CC G EF Y+ ++ RV A + + + E + I++ +KQVVNV+QL Sbjct: 9 TTANEVLLYIPNLIGYIRVIFTLLSLILMICIPDLWAFAIILYVSSFVGDLFDGMAARRFGQCSTFGGLLDMVTDRCSTAGL-LCALSNEYSGQPSFLFTMLIILDISSHWCQMYSTTSLKQHHKSAEGNKGRFFLVRWYYLSYPFFGYCCVGAEFTYVTIYV------LSRVNASSGDNIDGYNAILKTLCEYVLLISVPACAVKQVVNVSQL 215
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40179.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 255 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 454
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40180.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 328 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 527
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40181.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 255 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 454
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40182.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 328 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 527
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40183.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 338 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 537
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40184.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 243 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 442
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40185.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 340 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 539
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40186.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 243 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 442
BLAST of NO04G04580 vs. NCBI_GenBank
Match: CCI40187.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.0 bits (323), Expect = 3.200e-26 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 0 Query: 80 ATSKWSIFFYLPNLIGYLRVIATLYSLYLGVQRKAKWENVVGLYFLAFALDAVDGHVARMVGQESGFGGVLDMVTDRTATAGLVMINLLVEIEDWKKFGWISLCMLDISSHWFHCIAAAGRHHKSAEATAGKNFILQWYYACKPLFFACCTGQEFFYLLNFIKEKGVTFGRVAAPEWLHPEMKVHFPIDILESLWWITMVLAGIKQVVNVAQLASAAVSLA 301 AT+K +F Y+PNL+GYLRVI +LYSL + + ++ + Y +FA D DG AR + Q S FG VLDMVTDR +TAGL+ I L + K ++ + +LD SSHW H ++ G HHK+ +NF+L+ YY C PLF CC G E FY+L +I A + + + P+ L + + + +K ++N+AQL SAA ++A Sbjct: 326 ATAK-HVFLYVPNLVGYLRVILSLYSLSIAL---VDYKTSLVCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFI--LAHLYPAKSIYFLYILLLDFSSHWMHMYSSRG-HHKT--GLHERNFLLRVYYGCYPLFGYCCVGSEVFYMLLYI----------LAFDASYKIPLIQLPLTHL--CYIVCLPACVMKNIINLAQLFSAANAIA 525 The following BLAST results are available for this feature:
BLAST of NO04G04580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04580 ID=NO04G04580|Name=NO04G04580|organism=Nannochloropsis oceanica|type=gene|length=1510bpback to top protein sequence of NO04G04580.1 >NO04G04580.1-protein ID=NO04G04580.1-protein|Name=NO04G04580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=399bpback to top Synonyms
Publications
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