NO04G04200, NO04G04200 (gene) Nannochloropsis oceanica

Overview
NameNO04G04200
Unique NameNO04G04200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1743
Alignment locationchr4:1144247..1145989 -

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Properties
Property NameValue
DescriptionRetinol retinaldehyde reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1144247..1145989 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_002605547.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN61557.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae])

HSP 1 Score: 204.5 bits (519), Expect = 6.400e-49
Identity = 120/308 (38.96%), Postives = 180/308 (58.44%), Query Frame = 0
Query:   79 LLGPILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGIA--KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMV--AVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGE 381
            +L  +++ L V Y VV+ ++     ++   DK V ITGCD+GFG  L+  L Q G +V+A CLT  G   +   C+  +Q + +DV+ +D VQ A   V ++   +GL+ LVNNAGIA    G ++W +  D++  + VN  G+I VTK FLPL+K+ +GR+V V+S  G     P + PY+ SK+ VE F+  LR+ MR +G+KV  I PGFHRTE+     A++ L+  W +  P  + EYG  + +  K+ V    +  + DPV VV A+EHA+  TRPR +Y +G DA+   V     P  LG+
Sbjct:    5 MLLEVISVLWVTYSVVT-WWLERGRLSQLTDKTVLITGCDTGFGNLLSKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGIAGVAGGPMEWATKEDYQAVLNVNLLGMIDVTKTFLPLLKKSRGRVVNVASAVG-RMAVPHAGPYTVSKYGVEAFSDCLRRAMRYFGVKVHIIEPGFHRTEITNQENALRLLDHTWQRQSPETKTEYGEEFLQAAKDAV-VAADRFMQDPVAVVDAMEHALCATRPRSRYVIGWDARIMFVPISWLPTDLGD 309          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: EWM26706.1 (retinol dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 203.4 bits (516), Expect = 1.400e-48
Identity = 131/324 (40.43%), Postives = 180/324 (55.56%), Query Frame = 0
Query:   57 NNLCHIDLLEEWI-WYSYFAGAWLLGPILAFLIV----CYDV--VSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECAAVQTVLLDVTKADQVQSAADRVDSENP-QGLYALVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKR------RKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKY 367
            NN  H ++    I +Y Y+ G WL  P++AF  +     YD+    GF  P           V ITGC SGFG  L + LA +G+KVY AC+  E      +    V+ ++LDVT  +QV++A   VD ENP +GLYALVNNAG    G  DW S+  F+V M+VNY+G I VTKA LPL+KR         RI+ ++S +G+  G PL   YSASKHA E ++++LRQEMR + I+V+ +NP +H T   +   + L   +   PP +Q +YG  Y     E      +   + P NV R +  AVT  R R QY VGLDA++
Sbjct:   33 NNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPC--------GPVLITGCSSGFGLDLTMALAAQGWKVY-ACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARF 347          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_002599606.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN55618.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae])

HSP 1 Score: 202.6 bits (514), Expect = 2.400e-48
Identity = 120/306 (39.22%), Postives = 178/306 (58.17%), Query Frame = 0
Query:   83 ILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGIAK--SGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEM--NMVAVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKI 383
            I+  L V Y VV+ ++     ++    K V ITGCD+GFG  LA  L Q G +V+A CLT  G   +   C+  +Q + +DV+ +D VQ A   V ++   +GL+ LVNNAG+     G  +W ++ D++  + VN  G+I VTK FLPL+K+ +GR+V V+S AG     PL  PY+ SK+ VE F+  LR+ MR +G+KV  I PG  RT+M  + + ++ L+  W +  P  +AEYG  + +  K+ +   T   + DPV VV A+EHA+  T PR +Y VG DA++  V T   P  LG+ I
Sbjct:    9 IIIVLWVTYFVVT-WWLEKGRLSQLTGKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLHGLVNNAGVTGVFGGTTEWATLEDYQAVLNVNLLGMIDVTKTFLPLLKKSRGRVVNVASAAG-RMANPLGVPYTVSKYGVEAFSDCLRRAMRCFGVKVHIIEPGLFRTDMTNHDIILRRLDQTWQRQTPETKAEYGEEFLQAAKDDIIFGT-RFLQDPVAVVDAMEHALCATHPRSRYVVGWDARFITVPTSWLPTDLGDLI 311          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_015214471.1 (PREDICTED: retinol dehydrogenase 3-like isoform X2 [Lepisosteus oculatus] >XP_015214472.1 PREDICTED: retinol dehydrogenase 3-like isoform X2 [Lepisosteus oculatus])

HSP 1 Score: 202.2 bits (513), Expect = 3.200e-48
Identity = 110/264 (41.67%), Postives = 165/264 (62.50%), Query Frame = 0
Query:  109 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGIA-KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAV--QGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVV-FDPVNVVRALEHAVTCTRPRVQYRVGLDAKY 367
            DK V+ITGCD+GFG  LA HL Q+GF+V AAC T +G + +       + T+ LDVTK++ +  AA+ + D    +GL+ LVNNAG++  SG  DW ++ D+R  ++VN  GVIAVT + LPL+K+ +GR+V V+SV G     P   PYS SK+ VE F  +LR+ M P+G+KV  I PGF +T +  + +  + ++  W K+P  ++ +YGSSY +     ++K   ++   D + VV  +EHAV+   PR +Y  G DAK+
Sbjct:   29 DKYVYITGCDTGFGNQLAKHLDQQGFRVIAACFTEKGEDALRKGATDRLVTLHLDVTKSESIAKAAELIKDRVGEKGLWGLVNNAGVSVPSGPCDWLTVDDYRQMLDVNLLGVIAVTLSVLPLIKKARGRVVNVASVFGRIS--PFGGPYSVSKYGVEAFNDSLRRNMMPFGVKVLCIEPGFFKTSVTDIDILLKNVQQLWDKMPQEVKDDYGSSYVQKVSVLMKKMMGQLPDSDLMKVVSCMEHAVSAVHPRTRYSPGWDAKF 290          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: AAG44847.1 (microsomal retinol dehydrogenase 1 [Branchiostoma floridae])

HSP 1 Score: 202.2 bits (513), Expect = 3.200e-48
Identity = 119/304 (39.14%), Postives = 180/304 (59.21%), Query Frame = 0
Query:   83 ILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGI--AKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMV--AVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGE 381
            I A L V Y VV+ ++     ++   DK V ITGCD+GFG  LA  L Q G +V+A CLT  G   +   C+  +Q + +DV+ +D VQ A   V ++   +GL+ LVNNAGI     G ++W +M D++  + VN  G+I VTK FLPL+K+  GR+V V+S AG     P + PY+ +K+ VE F+ +LR+ MR +G+KV  I PG+ RTE+N    A++ L+  W ++ P  + EYG  + +  K+ +   ++  + DPV VV A+EHA+  T PR +Y +G DA++  V     P  LG+
Sbjct:    9 ITAVLWVTYLVVT-WWLERGRLSQLTDKTVLITGCDTGFGNLLAKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGILGVAGGTMEWATMEDYQAVLNVNLLGMIDVTKTFLPLLKKSSGRVVNVASAAG-RVAVPDAGPYTVAKYGVEAFSDSLRRAMRYFGVKVHIIEPGYFRTEINNQENALRRLDDIWQRLSPETRTEYGEEFLQAGKDAIIA-SDRFMQDPVAVVDAMEHALCATHPRSRYVIGWDARFIFVPICWLPTDLGD 309          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_006636595.2 (PREDICTED: retinol dehydrogenase 3-like isoform X1 [Lepisosteus oculatus])

HSP 1 Score: 202.2 bits (513), Expect = 3.200e-48
Identity = 110/264 (41.67%), Postives = 165/264 (62.50%), Query Frame = 0
Query:  109 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGIA-KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAV--QGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVV-FDPVNVVRALEHAVTCTRPRVQYRVGLDAKY 367
            DK V+ITGCD+GFG  LA HL Q+GF+V AAC T +G + +       + T+ LDVTK++ +  AA+ + D    +GL+ LVNNAG++  SG  DW ++ D+R  ++VN  GVIAVT + LPL+K+ +GR+V V+SV G     P   PYS SK+ VE F  +LR+ M P+G+KV  I PGF +T +  + +  + ++  W K+P  ++ +YGSSY +     ++K   ++   D + VV  +EHAV+   PR +Y  G DAK+
Sbjct:   32 DKYVYITGCDTGFGNQLAKHLDQQGFRVIAACFTEKGEDALRKGATDRLVTLHLDVTKSESIAKAAELIKDRVGEKGLWGLVNNAGVSVPSGPCDWLTVDDYRQMLDVNLLGVIAVTLSVLPLIKKARGRVVNVASVFGRIS--PFGGPYSVSKYGVEAFNDSLRRNMMPFGVKVLCIEPGFFKTSVTDIDILLKNVQQLWDKMPQEVKDDYGSSYVQKVSVLMKKMMGQLPDSDLMKVVSCMEHAVSAVHPRTRYSPGWDAKF 293          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_022787995.1 (retinol dehydrogenase 7-like isoform X1 [Stylophora pistillata] >PFX27243.1 Retinol dehydrogenase 3 [Stylophora pistillata])

HSP 1 Score: 202.2 bits (513), Expect = 3.200e-48
Identity = 113/284 (39.79%), Postives = 172/284 (60.56%), Query Frame = 0
Query:  110 KVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECAAVQTVL-LDVTKADQVQSAADRVDSENPQ--GLYALVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEM-NMVAVQG-LEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDP--VNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYAL 387
            K V +TGCDSGFG+  A+ L   GF V+A CLT+EG EN+T  C+   T L LDVT + +++     V    P+  GL+ LVNNAGIAK G I+W ++ +F+   +VN +G+I VTK FLPL+K+ +GRI+ ++S+ G +C  P ++ YS SK  VE F+ ALR+E+ P G+KVS + PGF +T++ N   ++G  +  WA +   ++ EYG  ++E   + +     +    P    VV A+ H++T   P+ +Y VG DAK   +W    P  +G+ I+  L
Sbjct:   63 KYVLVTGCDSGFGRETALRLDSLGFNVFATCLTSEGQENLTAACSKRLTALHLDVTDSKEIKETYKFVAQYLPENRGLWGLVNNAGIAKVGPIEWQTIEEFKQIADVNLWGLIDVTKVFLPLIKKERGRIINLASIGGRTC-LPHASAYSISKFGVEAFSDALRRELGPTGVKVSIVEPGFFQTKITNPDNLKGQWQELWANLNHSLKEEYGEKFYETSVKNMLTGMVDTCASPYLYKVVDAIVHSLTSRYPKTRYMVGWDAKLLWIWISRLPAGVGDAILNLL 345          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_022787997.1 (retinol dehydrogenase 7-like isoform X2 [Stylophora pistillata])

HSP 1 Score: 202.2 bits (513), Expect = 3.200e-48
Identity = 113/284 (39.79%), Postives = 172/284 (60.56%), Query Frame = 0
Query:  110 KVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECAAVQTVL-LDVTKADQVQSAADRVDSENPQ--GLYALVNNAGIAKSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEM-NMVAVQG-LEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDP--VNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYAL 387
            K V +TGCDSGFG+  A+ L   GF V+A CLT+EG EN+T  C+   T L LDVT + +++     V    P+  GL+ LVNNAGIAK G I+W ++ +F+   +VN +G+I VTK FLPL+K+ +GRI+ ++S+ G +C  P ++ YS SK  VE F+ ALR+E+ P G+KVS + PGF +T++ N   ++G  +  WA +   ++ EYG  ++E   + +     +    P    VV A+ H++T   P+ +Y VG DAK   +W    P  +G+ I+  L
Sbjct:   38 KYVLVTGCDSGFGRETALRLDSLGFNVFATCLTSEGQENLTAACSKRLTALHLDVTDSKEIKETYKFVAQYLPENRGLWGLVNNAGIAKVGPIEWQTIEEFKQIADVNLWGLIDVTKVFLPLIKKERGRIINLASIGGRTC-LPHASAYSISKFGVEAFSDALRRELGPTGVKVSIVEPGFFQTKITNPDNLKGQWQELWANLNHSLKEEYGEKFYETSVKNMLTGMVDTCASPYLYKVVDAIVHSLTSRYPKTRYMVGWDAKLLWIWISRLPAGVGDAILNLL 320          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: XP_012305936.1 (17-beta-hydroxysteroid dehydrogenase type 6 [Aotus nancymaae] >XP_012305937.1 17-beta-hydroxysteroid dehydrogenase type 6 [Aotus nancymaae])

HSP 1 Score: 201.4 bits (511), Expect = 5.400e-48
Identity = 111/280 (39.64%), Postives = 164/280 (58.57%), Query Frame = 0
Query:  109 DKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGIAKS-GLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMV--AVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKII 384
            DK VFITGCDSGFG  LA  L  +G +V AACLT +GAE +  + +  ++TV LD+TK + + +A   V +    +GL+ LVNNAGI K   L +W S+ D    ++VN  GVI VT + LPLV+R +GRIV VSS+ G    +  +  Y  SK  +E F+  LR+E+R +G+K+S + PG+ RT M  +  +++G++ CW K P HI+  YG  YF+     +++       +   V   +EHA+T   PR +Y  G DAK+  +     P  L + I+
Sbjct:   29 DKYVFITGCDSGFGNLLARQLDARGLRVLAACLTEKGAEQLRRQTSDRLETVTLDITKMESIAAATQWVKEHVGDRGLWGLVNNAGIIKPVSLCEWLSIDDSMDILKVNLIGVIQVTLSMLPLVRRARGRIVNVSSILGRIASF--AGVYCVSKFGIEAFSDILRRELRHFGVKISIVEPGYFRTGMTNLTQSLEGVKQCWEKAPKHIKETYGQQYFDAFYNIIKEGLLSCSTNLNLVTDCMEHALTSVHPRTRYSAGWDAKFFFIPLSYLPTSLADYIL 306          
BLAST of NO04G04200 vs. NCBI_GenBank
Match: AAG44848.1 (microsomal retinol dehydrogenase 2 [Branchiostoma floridae])

HSP 1 Score: 201.4 bits (511), Expect = 5.400e-48
Identity = 119/309 (38.51%), Postives = 177/309 (57.28%), Query Frame = 0
Query:   78 WLLGPILAFLIVCYDVVSGFFFPVWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMTTECA-AVQTVLLDVTKADQVQSAADRV-DSENPQGLYALVNNAGIA--KSGLIDWFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYPLSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMV--AVQGLEGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVTCTRPRVQYRVGLDAKYGLVWTQIFPLRLGE 381
            W L  I++ L   Y VV+ ++     ++   DK V ITGCD+GFG  LA  L Q G +V+A CLT  G   +   C+  +Q + +DV+ +D VQ     V ++   +GL+ LVNNAGIA    G ++W +  D++V + VN  G+I VTK FLPL+K+ +GR+V V+S  G     P + PY+ SK+ VE F+  LR+ MR +G+KV  I PGFHRTE+     A++ ++  W +     + EYG  + +  K+ V    +  + DPV VV A+EHA+  T PR +Y VG +A+   V     P  LG+
Sbjct:    4 WTLLEIISALWAMYSVVT-WWLERGRLSQLTDKTVLITGCDTGFGNLLAKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDGFRVVKEAVGSKGLWGLVNNAGIAGVAGGTMEWATKEDYQVVLNVNLLGMIDVTKTFLPLLKKSRGRVVNVASAVG-RMAVPQAGPYTVSKYGVEAFSDCLRRAMRYFGVKVHIIEPGFHRTEITNEENALRRMDQIWQRQSAETKTEYGEEFLQAAKDAV-VAADRFMQDPVAVVDAMEHALCATHPRSRYVVGWNARIMFVPISWLPTDLGD 309          
The following BLAST results are available for this feature:
BLAST of NO04G04200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002605547.16.400e-4938.96retinol dehydrogenase, retinaldehyde reductase [Br... [more]
EWM26706.11.400e-4840.43retinol dehydrogenase [Nannochloropsis gaditana][more]
XP_002599606.12.400e-4839.22retinol dehydrogenase, retinaldehyde reductase [Br... [more]
XP_015214471.13.200e-4841.67PREDICTED: retinol dehydrogenase 3-like isoform X2... [more]
AAG44847.13.200e-4839.14microsomal retinol dehydrogenase 1 [Branchiostoma ... [more]
XP_006636595.23.200e-4841.67PREDICTED: retinol dehydrogenase 3-like isoform X1... [more]
XP_022787995.13.200e-4839.79retinol dehydrogenase 7-like isoform X1 [Stylophor... [more]
XP_022787997.13.200e-4839.79retinol dehydrogenase 7-like isoform X2 [Stylophor... [more]
XP_012305936.15.400e-4839.6417-beta-hydroxysteroid dehydrogenase type 6 [Aotus... [more]
AAG44848.15.400e-4838.51microsomal retinol dehydrogenase 2 [Branchiostoma ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009365NSK009365Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04200.1NO04G04200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|538385gene_2207Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g152gene1788Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04200.1NO04G04200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04200 ID=NO04G04200|Name=NO04G04200|organism=Nannochloropsis oceanica|type=gene|length=1743bp
GGTCCTGGGGGCGAGCGCCTCTCACCTTACATAGATCGAGCTCCCCTCCG
GCGACATGCCGACAAGCACAAGATGTGTCGCCAGCGAGATTCCTCGGCCT
GCTTGCCCTGCCTGCTACAAACTCCTTCTGAACCTATCCCTAATCTTCCG
TCCAGAGTGTGGTGGTCTTTGGGGGGAGAATTTGAGTATGGCCCAGACCA
CGGCTCACCAGTGCCCCTCATCAAACACATGCAAATCCAGATCTCATGCA
TCGAACACATCCTACTACAACGACTCTCACACAGCAGAGCAGCCAAGTCT
CCAACTACCAAGCCCAGCCAACCTTCCCGTCCTCCCATTACAACTTTCGC
CTTGCCTCCGGGTCTCCAGACCTTCGATCTCTATACAGCATGGGCAGCTT
CCTTGACTTCTGGAACAACTTGTGCCACATCGACTTGCTGGAGGAGTGGA
TCTGGTACAGCTACTTCGCCGGTGCCTGGTTGCTGGGCCCCATCTTGGCC
TTCCTGATTGTGTGTTATGACGTTGTCTCTGGGTTCTTCTTTCCTGTTTG
GCACATTGCGCCTAGCCTGGACAAGGTGGTGTTCATCACGGGCTGTGACT
CGGGCTTTGGCAAGGCCTTGGCCATACATCTGGCCCAGAAGGGATTCAAA
GTGTATGCGGCGTGCTTGACGGCCGAGGGCGCGGAGAATATGACAACGGA
GTGTGCGGCGGTGCAGACGGTGCTGTTGGATGTCACCAAGGCAGACCAAG
TTCAGTCGGCGGCGGATCGCGTCGATTCGGAGAACCCCCAAGGGCTATAC
GCGCTGGTAAACAATGCGGGTATTGCCAAGTCGGGATTGATTGACTGGTT
TAGCATGTCCGACTTTCGGGTTTGCATGGAAGTGAACTATTTTGGGGTCA
TCGCAGTGACCAAGGCGTTCTTACCCCTGGTCAAACGGCGCAAGGGTCGG
ATAGTCGTCGTCTCCTCCGTCGCCGGTGTCTCTTGCGGCTACCCTTTAAG
CACACCCTACAGCGCATCGAAGCACGCTGTGGAGCTCTTTGCCTCGGCGT
TGCGTCAAGAGATGCGGCCCTGGGGAATCAAGGTCTCGACTATCAATCCT
GGCTTTCATCGGACTGAGATGAACATGGTGGCCGTGCAGGGGCTGGAGGG
CTGCTGGGCCAAGGTGCCCCCCCATATTCAAGCAGAGTATGGCTCGAGCT
ATTTCGAGGGGTGCAAGGAATTCGTCAGGAAGCATACGGAGGAAGTGGTT
TTTGACCCGGTCAATGTGGTGCGGGCGTTAGAGCATGCCGTGACGTGCAC
ACGGCCTCGGGTCCAATATCGCGTGGGTTTGGATGCAAAGTACGGCTTGG
TATGGACGCAAATTTTCCCGTTGCGTCTGGGAGAGAAAATCATCTACGCT
TTGACCACAAATAAGAAGATGCGCAGCATCGTGGGGCTCAAGCCCGTGGG
GAAGGCCATGGAGGCGGAGGACTCTCGGGGGCAAGCAAGGGAGATAGAAG
GTTTGTAGAGTGCTTGTGTGATGCAAGCAGAGTGACAATAAGAACACCAT
GGTTATGCCGAGAAATGGGATTTTCGGCAGGGGGTCGAGGAATGAAGGCA
AGGGAATCAAATTGTGAAATAGAAGACATACAGTGACAGAGGGGAAGCGG
GAGCATAGCGAAACCAGTAGGCCAGAAATTATCAACTTTCTAAGTTGCTT
TCCATAAAACCCCATAAAATTAAGAAACTACCACACTCACGCC
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protein sequence of NO04G04200.1

>NO04G04200.1-protein ID=NO04G04200.1-protein|Name=NO04G04200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=421bp
MHRTHPTTTTLTQQSSQVSNYQAQPTFPSSHYNFRLASGSPDLRSLYSMG
SFLDFWNNLCHIDLLEEWIWYSYFAGAWLLGPILAFLIVCYDVVSGFFFP
VWHIAPSLDKVVFITGCDSGFGKALAIHLAQKGFKVYAACLTAEGAENMT
TECAAVQTVLLDVTKADQVQSAADRVDSENPQGLYALVNNAGIAKSGLID
WFSMSDFRVCMEVNYFGVIAVTKAFLPLVKRRKGRIVVVSSVAGVSCGYP
LSTPYSASKHAVELFASALRQEMRPWGIKVSTINPGFHRTEMNMVAVQGL
EGCWAKVPPHIQAEYGSSYFEGCKEFVRKHTEEVVFDPVNVVRALEHAVT
CTRPRVQYRVGLDAKYGLVWTQIFPLRLGEKIIYALTTNKKMRSIVGLKP
VGKAMEAEDSRGQAREIEGL*
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Synonyms
Publications