NO04G04010, NO04G04010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04010 vs. NCBI_GenBank
Match: EWM28675.1 (kinetochore protein spc25 [Nannochloropsis gaditana]) HSP 1 Score: 268.5 bits (685), Expect = 2.000e-68 Identity = 173/231 (74.89%), Postives = 186/231 (80.52%), Query Frame = 0 Query: 1 MAATAEQLARSLTQDITETQARLDTWLESSKADLEGLETRHGKALAEMGAERATLLARQAELKNKTEEGARLSQQDQEALSAVEAEIAALKEKEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTSRQGEYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFKATIGSN 232 MAATAEQLARS+ QDITETQARLD WLE+S+ADLEGLE RH KALAEM AERATLLARQAELK KT+EG RLS+Q XXXXXXXXXXXXXXXXXXXXXXXXX G+YINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLD++NP RE+FFSVHIDE D+YRVEEC P LD MV+GLV E+N+ANDFA FVKKMRRAFKATI SN Sbjct: 16 MAATAEQLARSIAQDITETQARLDKWLENSRADLEGLEMRHEKALAEMVAERATLLARQAELKGKTDEGTRLSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKATIKSN 246
BLAST of NO04G04010 vs. NCBI_GenBank
Match: GBG26012.1 (Kinetochore protein Spc25 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 100.1 bits (248), Expect = 9.300e-18 Identity = 70/214 (32.71%), Postives = 104/214 (48.60%), Query Frame = 0 Query: 31 KADLEGLETRHGKALAEMGAERAT-----------LLARQAELKNKTEEGARLSQQDQEALSAVEAEIAALKEKEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTS-------RQGEYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFKA 227 +A LE E + AEM E A L AR L + EE A + +++ L+A + ++AAL ++ LG+ + Q + LTRG +YK LGL+F+R D+ +LRL FTQ+D +P REFFF + +D++D Y VE+ PA VG + L+ VN NDF++FV+ MR F+A Sbjct: 24 RAKLEAREAQVRGFCAEMAEETAAHAGDAESKLEDLRARIEALAKEREELASMGWANEQRLAAQQKKVAALHDELDGLRTNYADVENAMQNANNRRTELLGTLGAKEADIEAERETQQHRVAQLTRGATLYKKLGLEFQRDDNTRLRLSFTQIDPRDPDREFFFVIFVDKDDCYHVEQVEPA--VGSISDLIRRVNATNDFSSFVRSMRTKFQA 235
BLAST of NO04G04010 vs. NCBI_GenBank
Match: GAX17091.1 (kinetochore protein Spc25, fungi type [Fistulifera solaris]) HSP 1 Score: 90.5 bits (223), Expect = 7.400e-15 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0 Query: 133 INDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAF 225 I+DLTRG++ YK+LGLDFER D+KLR FTQLD SNP R+F+F + + E D + C P + E LV NK D FV MRRAF Sbjct: 144 IDDLTRGIINYKYLGLDFERVPDDKLRFCFTQLDPSNPSRKFWFEMDVTELD-CSIPNCEPPIRSETREQLVQAFNKNEDMQEFVLGMRRAF 234
BLAST of NO04G04010 vs. NCBI_GenBank
Match: GAX25380.1 (kinetochore protein Spc25, fungi type [Fistulifera solaris]) HSP 1 Score: 88.6 bits (218), Expect = 2.800e-14 Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0 Query: 133 INDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAF 225 I+DLTRG++ YK+LGLDFER ++KLR FTQLD SNP R+F+F + + E D + C P + E LV NK D FV MRRAF Sbjct: 144 IDDLTRGIINYKYLGLDFERVPNDKLRFCFTQLDPSNPSRKFWFEMDVTELD-CSIPNCEPPIRSETREQLVQAFNKNEDMQEFVLGMRRAF 234
BLAST of NO04G04010 vs. NCBI_GenBank
Match: CBJ26988.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.1 bits (209), Expect = 3.100e-13 Identity = 63/234 (26.92%), Postives = 114/234 (48.72%), Query Frame = 0 Query: 1 MAATAEQLARSLTQDITETQARLDTWLESSKADLEGLETRHGKALAEMGAERATLLARQAELKNKTEEGARLSQQDQEALSAVEAEIAALKE-KEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTSR---QGEYINDLTRGVVMYKHLGLDFERADDNK------LRLIFTQLDSSNPGREFFFSVHIDENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAF 225 MA A+++++ L ++ + +L+ W+ + L +++ + + + AE L R A+ K+ T A + ++ ++ E+ L+E +E A G + +R + E ++ L +GV++Y+ LGL+FE D LRL+F Q+ P R F +V ID+N +Y V EC PAL + ++ +VN++NDFA FV ++RR F Sbjct: 12 MAEMADRMSKELRSEMHNAEVQLNNWVAEREQRLADVQSDYAQTMEARAAEVVEL--RNAD-KDTTARRAHCAAVVKKQEEQLQEEVKRLEELRETEREEMPAKLEVLGAEHQRIAKNLEAKQGEMLTRRHVKEEELSVLGKGVLLYRRLGLEFEGGDTGDDGSMKCLRLVFRQISRQEPERPFVIAVFIDDNGRYVVPECFPALPTEDLNRMLEDVNESNDFAKFVSRVRRGF 242
BLAST of NO04G04010 vs. NCBI_GenBank
Match: XP_004364432.1 (hypothetical protein CAOG_01564 [Capsaspora owczarzaki ATCC 30864] >KJE90223.1 hypothetical protein CAOG_001564 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 84.0 bits (206), Expect = 6.900e-13 Identity = 56/224 (25.00%), Postives = 99/224 (44.20%), Query Frame = 0 Query: 6 EQLARSLTQDITETQARLDTWLESSKADLEGLETRHGKALAEMGAERATLLARQAELKNKTEEGARLSQQDQEALSAVEAEIAALKEKEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTSRQGEYINDLTRGVVMY-KHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFKATI 229 E+ L +D+ +D W +S ++ + RH K + + A L A +L +E G L+ Q ++ + ++ L++++ L + +LTRGV + + LGL +R + L+ IF +D N REF FSV IDE + Y V+ C P ++ + G+V ++N N + F+K +R+ FKA + Sbjct: 7 ERSLEQLQEDMLTAARMVDNWADSQLKEMRHAQLRHTKTMEDDKENAAKLQASLKQLGEHSEAGQILASQQAAEIALSRSAVSQLQQQKELAMDTQNDIRQQIAAREQALVRETEMLSERERDAATSMKELTRGVQFFSERLGLKIQRTGKHHLQFIFRYIDPYNVNREFSFSVRIDEKNMYHVDVCEPMVE--DLAGMVAQLNDDNQLSVFIKNIRKKFKAMV 228
BLAST of NO04G04010 vs. NCBI_GenBank
Match: OQS01074.1 (hypothetical protein THRCLA_05777 [Thraustotheca clavata]) HSP 1 Score: 83.6 bits (205), Expect = 9.000e-13 Identity = 41/96 (42.71%), Postives = 64/96 (66.67%), Query Frame = 0 Query: 131 EYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDEN-DQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFK 226 + +++L +G+ +Y+ LGL ++ +N L IFTQLD +NP REF FS+ I++N D + VE CVP +V V L+ ++NK + +TFV+ MR FK Sbjct: 127 QVVDELMKGISLYQKLGLLIDKKRENNLAFIFTQLDPNNPNREFSFSLRIEDNPDVFLVENCVP--EVSDVNELLDQLNKTGNISTFVRAMRLRFK 220
BLAST of NO04G04010 vs. NCBI_GenBank
Match: GAY01031.1 (Hypothetical protein PINS_008867 [Pythium insidiosum]) HSP 1 Score: 83.6 bits (205), Expect = 9.000e-13 Identity = 67/223 (30.04%), Postives = 108/223 (48.43%), Query Frame = 0 Query: 12 LTQDITETQARLDTWLESSKADL-------EGLETRHGKALAEMGAERATLLARQAELKNKTEEGARLSQQDQEALSAVEAEIAALKEKEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTSRQGEYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHID-ENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFKA 227 +TQ+I+ T+ L+ W++ K+ L E E H + A+ +R+ EL+ ++ R Q + ++AE +KE X X A SLT E +N+LTRG+ MY LGL FE+ + ++ + FTQ+D+ NP REF F + +D + D + +EC P V ++ L+ N+ DF+ F++ MRR FKA Sbjct: 30 VTQNIS-TRQELERWIQEQKSRLLREKREHEFHEQEHTRLTADAEQQRSQXXXXLQELRTDCDDHERQVSVQQVEIEVLQAEKG---KKEPVLRELXEQNRSXDDELKRLTLEAQAQQTSLT----EQLNELTRGLEMYARLGLSFEQHNAEQIIVRFTQIDAQNPQREFSFRIRMDPQTDSFVADECEP--PVATLDALMQXXNETADFSRFIRSMRREFKA 242
BLAST of NO04G04010 vs. NCBI_GenBank
Match: XP_002178778.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49476.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 81.6 bits (200), Expect = 3.400e-12 Identity = 86/230 (37.39%), Postives = 133/230 (57.83%), Query Frame = 0 Query: 12 LTQDITETQARLDTWLESSKADLEGLETRHGKALA----EMGAERATLLARQ-------AELKNKTEEGARLSQQDQEAL---SAVEAEIAALKEKEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTSRQGEYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHIDE-NDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFKA 227 L + + +++R++TW+E KA + + R + A + LLA Q +E ++ T++ L+ + +E L AVE XXXXXXXXXXXXXXXXXXXXXXXXX + + + + DLT+G+V Y++LG+DF++A DN ++ FTQLD + P R+F F + +D+ +DQY V+ C P + ++ L+ ++N +D FV MR AFKA Sbjct: 17 LRESLILSRSRVETWVEHEKAQADAVYERSKQTRASHQHRIDQALTNLLALQLEGGLAVSETESTTKKEKNLAARKEELLREQEAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKQRVQASKQTTLEDLTKGIVNYQYLGIDFQKAQDNHMKFYFTQLDPTQPKRQFSFLLQVDDVDDQYIVDVCDPPIPEHILNELLSDLNADDDMLPFVIGMRHAFKA 246
BLAST of NO04G04010 vs. NCBI_GenBank
Match: GAY01382.1 (Hypothetical protein PINS_009190 [Pythium insidiosum]) HSP 1 Score: 80.5 bits (197), Expect = 7.600e-12 Identity = 63/223 (28.25%), Postives = 105/223 (47.09%), Query Frame = 0 Query: 12 LTQDITETQARLDTWLESSKADL-------EGLETRHGKALAEMGAERATLLARQAELKNKTEEGARLSQQDQEALSAVEAEIAALKEKEXXXXXXXXXXXXXXXXXXXXXXXXXAALGSLTSRQGEYINDLTRGVVMYKHLGLDFERADDNKLRLIFTQLDSSNPGREFFFSVHID-ENDQYRVEECVPALDVGMVEGLVGEVNKANDFATFVKKMRRAFKA 227 +TQ+I+ T+ L+ W++ K+ L E E H + A+ +R L+ ++ R Q + ++AE +KE A SLT E +N+LTRG+ MY LGL FE+ + ++ + FTQ+D+ P REF F + +D + D + +EC P V ++ L+ ++N+ DF+ F++ MRR FKA Sbjct: 30 VTQNIS-TRQELERWIQEQKSRLLREKREHEFHEQEHTRLTADAEQQRXXXXXXXXXLRTDCDDHERQVSVQQVEIEVLQAEKG---KKEPVLRELFEQNRSKDDELKRLTLEAQAQQTSLT----EQLNELTRGLEMYARLGLSFEQHNAEQIIVRFTQIDAQKPQREFSFRIRMDPQTDSFVADECEP--PVATLDALMQQMNETADFSRFIRSMRREFKA 242 The following BLAST results are available for this feature:
BLAST of NO04G04010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04010 ID=NO04G04010|Name=NO04G04010|organism=Nannochloropsis oceanica|type=gene|length=696bpback to top protein sequence of NO04G04010.1 >NO04G04010.1-protein ID=NO04G04010.1-protein|Name=NO04G04010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=232bpback to top Synonyms
Publications
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