NO04G03380, NO04G03380 (gene) Nannochloropsis oceanica

Overview
NameNO04G03380
Unique NameNO04G03380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1622
Alignment locationchr4:931413..933034 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:931413..933034 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G03380 vs. NCBI_GenBank
Match: CEM36155.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 303.1 bits (775), Expect = 1.300e-78
Identity = 150/285 (52.63%), Postives = 211/285 (74.04%), Query Frame = 0
Query:  136 SSVKDLDVSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADA--VFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEE 419
            ++ K +DV  ILQK+ ++A+GGGLSG+AAS++Q+ +LMWLRT+M +QY  G     +L  L+ EGG+PRFYRGLP A +Q PLS+FGD AANA +L  LDSF+ST GLPL VK+   S+AAG +R ++ P+D  KT++QV+G+ G  QV  +++E G + LY GA+A + ATFVGH+P+F T+NY+     LPP +     ++L RNA +GLC+S+++D  SNS RVIKTTKQTSE   +YRE +  ++++DGV+GLFGRGL TRL  N +QGM+F+V +R+ EE
Sbjct:   53 ATAKKVDVKTILQKSAKRAVGGGLSGSAASVLQVFSLMWLRTSMNYQYTTGLPLNTTLATLWSEGGVPRFYRGLPFALVQAPLSKFGDTAANAGVLALLDSFESTMGLPLFVKTASASVAAGLWRIVIFPVDTFKTTMQVRGAAGIPQVSDKVKETGPTVLYNGAIAASAATFVGHYPWFFTYNYLQE--HLPPVEPGDTLMKLMRNAFIGLCASSLADSLSNSLRVIKTTKQTSEDSPSYREVVSGIIEKDGVRGLFGRGLATRLLTNGVQGMLFAVAYRFFEE 335          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: XP_014152214.1 (hypothetical protein SARC_09248 [Sphaeroforma arctica JP610] >KNC78312.1 hypothetical protein SARC_09248 [Sphaeroforma arctica JP610])

HSP 1 Score: 301.6 bits (771), Expect = 3.900e-78
Identity = 149/276 (53.99%), Postives = 200/276 (72.46%), Query Frame = 0
Query:  143 VSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEE 419
            + +IL  AG++AIGGG+ GA A  + + +LMWLRTTM +QYRYG S  E+   LYKEGG+ RFYRG   A  Q PLSRFGD AANA +L  LDS+D+T  LP+ VK+IF S AA  +R  LMP+D +KT++QV+G+KG SQ++ +L   G   LY GA+A + ATFVGH+P+F  +N +   +     D    +LGRNA++G C+S VSD CSNS RV+KTTKQT+  Q++Y E ++ V+ QDG+ GLFGRGL+TR+ ANA+QGM+FSV+W+ LEE
Sbjct:   18 LQEILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILANAMQGMLFSVLWKALEE 293          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: CBJ32448.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 298.9 bits (764), Expect = 2.500e-77
Identity = 157/279 (56.27%), Postives = 205/279 (73.48%), Query Frame = 0
Query:  147 LQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEESQILFGG 426
            LQK  R A+GGG SGAAA++VQ+++LMWLRTTM +QY+ G S KE+L  L++EGGL R YRG+  A +Q PLSRFGD AAN  +L  L++F+STR LPLPVKS  GSLAAG +R  L P+DA KT+LQV G++G   +  ++   G + L++GA+A A ATFVGH+P++ T+N + + +   P+    L+LGR A+LGLCSS VSD CSNS RVIKTTKQT+   ++Y EAL+QVLD DGV GLF RGLQTR+  NALQG +F+V W+Y +E     GG
Sbjct:   17 LQKWSR-ALGGGASGAAAAVVQVLSLMWLRTTMNYQYKNGGSTKEALQTLWEEGGLSRLYRGVSFALVQGPLSRFGDTAANVGVLALLEAFESTRSLPLPVKSAAGSLAAGLWRIGLTPIDAYKTTLQVSGAEGTKLLAEKVAANGPTVLFEGALATASATFVGHYPWYFTYNSLGAWLPPAPSGEPLLKLGRQALLGLCSSCVSDCCSNSIRVIKTTKQTAPIPLSYPEALKQVLDDDGVPGLFLRGLQTRILVNALQGALFAVAWKYFQELLASGGG 294          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: XP_005827532.1 (hypothetical protein GUITHDRAFT_158297 [Guillardia theta CCMP2712] >EKX40552.1 hypothetical protein GUITHDRAFT_158297 [Guillardia theta CCMP2712])

HSP 1 Score: 298.5 bits (763), Expect = 3.300e-77
Identity = 162/299 (54.18%), Postives = 216/299 (72.24%), Query Frame = 0
Query:  121 APANAAAVGVAITDMSSVKDLDVSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPAD-AVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEE 419
            A A  AA G A  +     DL   ++L+KA  +AIGGG SGAAA ++Q+++LMWLRTTM +QYRYG S  E + KLYKEGG+ RFYRG+  A LQ PLSRFGD AANA M++ L+SFDSTR LP  VK++  S AA  +R  LMP+D+ KT++QV+  +G+ ++ A+++  GV  L++G+ A   ++FVGH+P+F TFN + S+I  P AD  + ++L RNA +GLC+S VSD CSNS RVIKTTKQTS  +I+Y EA++ V+  DG+KGL GRGL TRL  N LQGM+FSVVWR  +E
Sbjct:    5 AKAAHAAAGTAKGERGPPADL--GEVLKKAATRAIGGGRSGAAAGVLQVLSLMWLRTTMNYQYRYGGSMSEVMAKLYKEGGVGRFYRGVGFALLQQPLSRFGDTAANAGMVVLLESFDSTRELPPFVKTVCASAAAALWRIWLMPIDSFKTNMQVE-EEGFQKLLAKIRARGVGVLFEGSAATLGSSFVGHYPWFATFNTLQSMI--PQADNNLAVKLLRNAWIGLCASAVSDCCSNSLRVIKTTKQTSPQRISYVEAVQNVMQVDGIKGLLGRGLGTRLVTNGLQGMLFSVVWRLFDE 298          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: XP_001697915.1 (predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 290.4 bits (742), Expect = 8.900e-75
Identity = 146/272 (53.68%), Postives = 195/272 (71.69%), Query Frame = 0
Query:  143 VSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWR 415
            +  +L  AG KA+GGGL G AA   Q+++LMWLRTT+ +QYRYG     +L  LYKEGG+ RFYRGL  A +Q PLSRFGD AANA  L  LD++ ST GLP+ VK++  S AAG FR +LMP+D VKT +QV+G    + +  ++   G   LY GA+A A ATFVGH+P+F T+NY+++V+   PAD +  +LGR+AI+G CSS VSD CSNS RVIKTTKQT+   ++Y +  R ++++DGV GL GRGL+T++ AN LQG+ FS+VWR
Sbjct:   25 LGQVLADAGNKALGGGLPGMAAMATQVLSLMWLRTTINYQYRYGTDTTTALRTLYKEGGVRRFYRGLLPAMVQGPLSRFGDTAANAGTLSLLDAYPSTAGLPVGVKTLVASTAAGCFRVLLMPVDTVKTIMQVEGKDAVAALWRKVATGGPGVLYHGALASAAATFVGHYPWFATYNYLNAVLPKAPADDLKAKLGRSAIMGFCSSFVSDCCSNSIRVIKTTKQTTREPMSYPQVARMIIEKDGVLGLMGRGLKTKIIANGLQGICFSIVWR 296          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: PNW71548.1 (hypothetical protein CHLRE_16g658850v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 290.4 bits (742), Expect = 8.900e-75
Identity = 146/272 (53.68%), Postives = 195/272 (71.69%), Query Frame = 0
Query:  143 VSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWR 415
            +  +L  AG KA+GGGL G AA   Q+++LMWLRTT+ +QYRYG     +L  LYKEGG+ RFYRGL  A +Q PLSRFGD AANA  L  LD++ ST GLP+ VK++  S AAG FR +LMP+D VKT +QV+G    + +  ++   G   LY GA+A A ATFVGH+P+F T+NY+++V+   PAD +  +LGR+AI+G CSS VSD CSNS RVIKTTKQT+   ++Y +  R ++++DGV GL GRGL+T++ AN LQG+ FS+VWR
Sbjct:   28 LGQVLADAGNKALGGGLPGMAAMATQVLSLMWLRTTINYQYRYGTDTTTALRTLYKEGGVRRFYRGLLPAMVQGPLSRFGDTAANAGTLSLLDAYPSTAGLPVGVKTLVASTAAGCFRVLLMPVDTVKTIMQVEGKDAVAALWRKVATGGPGVLYHGALASAAATFVGHYPWFATYNYLNAVLPKAPADDLKAKLGRSAIMGFCSSFVSDCCSNSIRVIKTTKQTTREPMSYPQVARMIIEKDGVLGLMGRGLKTKIIANGLQGICFSIVWR 299          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: GAX21425.1 (hypothetical protein FisN_10Hu003 [Fistulifera solaris])

HSP 1 Score: 289.7 bits (740), Expect = 1.500e-74
Identity = 146/297 (49.16%), Postives = 214/297 (72.05%), Query Frame = 0
Query:  132 ITDMSSVKDLDVSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVI-LLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTS---------ESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEE 419
            ++ +S+   +D S IL KAG+KA+GGG +GA+AS+VQ+++LMWLRTTM +QYRYG S   +L  L+ EGG+PRFY+GLP A +Q PL+RFGD AAN  ++  L+S   T+ LPLPVK+  GS+ AG +R  LMP+DA KTSLQV+G+ G  ++   ++E G + LY+GA+AQA AT  GH+P+F+TFN+++  +  +  +D + L L R+A +G+ +S VSD  SNS RVIKTTKQT+         + +++Y E ++ ++++DG+  LFGRGLQTRL  NA+QG  FSV+W+Y ++
Sbjct:   36 LSSISTAASVDWSAILAKAGKKALGGGTAGASASVVQVLSLMWLRTTMNYQYRYGGSLPNALSTLWSEGGIPRFYQGLPFALVQGPLTRFGDTAANVGIIALLESLPQTKELPLPVKTACGSITAGLWRIFLMPVDASKTSLQVEGADGLKRLWESVRESGPAPLYRGALAQAAATTAGHFPWFLTFNFLNEQLPAVSSSDDLLLSLARSAFVGMSASCVSDCVSNSLRVIKTTKQTAQLGNDTTIKQKELSYPEVVQIIIEKDGIIALFGRGLQTRLLTNAIQGAAFSVLWKYFQQ 332          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: XP_004987768.1 (MC family transporter [Salpingoeca rosetta] >EGD81234.1 MC family transporter [Salpingoeca rosetta])

HSP 1 Score: 286.6 bits (732), Expect = 1.300e-73
Identity = 146/276 (52.90%), Postives = 199/276 (72.10%), Query Frame = 0
Query:  143 VSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEE 419
            V ++L KAG++A+GGG +GAAA + Q+ TLMWLRTTM +QYRYG S   ++  LYK+GG+ RFYRG+  A LQ PLSRFGD AAN  +L  LDS++STR LP+ VK++  S  A  +R +LMP+D +KT +QV+G  G ++++A+L+  G   LY G++A   ATFVGH+P+F TFNY+++ I  P A+  + +L R A +G CSS +SD  SNS RV K TKQ     ITY +A+R+V+ +DGV GLF RGL TRL AN +QGM+F+VVW+ LEE
Sbjct:   12 VQEVLAKAGKRALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATI--PEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQAHTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMMFTVVWKGLEE 285          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: XP_002185866.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65336.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 286.6 bits (732), Expect = 1.300e-73
Identity = 153/306 (50.00%), Postives = 214/306 (69.93%), Query Frame = 0
Query:  122 PANAAAVGVAITDMSSVKDLDVSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADA-VFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQT--------SESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEE 419
            PAN  + G   T       +D   I QKA +KA+GGG +GAAA++VQ+ +LMWLRT+M +QYRYG + + SL  L+ EGG+ R Y+GLP A +Q PL+RFGD AAN  +L+ L++  +T+ LPLP+K+  GS+AAG +R +LMP+DA KT +QV+GS G  ++   + E G S LY+GA+AQA AT  GH+P+F+T+NY++  +    ++A + L L R+A+LGL +S VSD  SNS RV+KTTKQT        S+ +ITY E +  +L+QDGV GLFGRGLQTRL  N +QG +FSV+WRY ++
Sbjct:   89 PANLISAGATET-------VDWQGIFQKASKKALGGGKAGAAAAVVQVCSLMWLRTSMNYQYRYGGNLQSSLNTLWAEGGIGRLYQGLPFALVQGPLTRFGDTAANVGILVLLETLPATQDLPLPLKTACGSVAAGLWRIVLMPVDASKTVMQVEGSGGLKRLWDSVLESGPSPLYRGALAQAAATAAGHFPWFLTYNYLNDQLPAVSSEADLLLSLARSALLGLSASCVSDCVSNSLRVVKTTKQTAQVGEGSDSKKEITYPEVVAMILEQDGVVGLFGRGLQTRLLTNMIQGAVFSVLWRYFQQ 387          
BLAST of NO04G03380 vs. NCBI_GenBank
Match: PSC76543.1 (mitochondrial carrier [Micractinium conductrix])

HSP 1 Score: 282.3 bits (721), Expect = 2.400e-72
Identity = 148/291 (50.86%), Postives = 210/291 (72.16%), Query Frame = 0
Query:  136 SSVKDLDVSDILQKAGRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEGGLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSIFGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGAVAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTVSDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLAANALQGMIFSVVWRYLEESQILFGGK 427
            SS +   ++D L++AG++A+GGG+ GAAA  VQ+++LMWLRTT+ +QYRYG S  ++L  LYK+GG+ RFYRGL  A LQ PLSRFGD AANA ML  L+  D    LP+ +K++  S AA AFR +LMP+DA KT +QV+G  G+S++ A+++  G + LY GA+A + ATFVGH+P+F  +N ++    LP  D +  RL R+A +G C+S VSD CSNS RV+KTTKQT+   ++Y EA+++V+ +DGV GLFGRGL+T++ AN LQG++FSV+WR  ++     G K
Sbjct:  480 SSKEKEPLADTLRRAGKRALGGGIPGAAAMGVQVLSLMWLRTTVNYQYRYGTSMSQALKHLYKDGGVVRFYRGLGPALLQGPLSRFGDTAANAGMLALLEGVD----LPVALKTVAASGAAAAFRIVLMPVDAAKTIMQVEGKGGFSKLLAKVRVGGPTVLYHGALAASAATFVGHYPWFFVYNSLNE--SLPQYDDLPKRLLRSAFIGFCASAVSDTCSNSIRVVKTTKQTATVPLSYPEAVKEVVAKDGVVGLFGRGLKTKIVANGLQGLMFSVLWRMGQDYLAASGAK 764          
The following BLAST results are available for this feature:
BLAST of NO04G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEM36155.11.300e-7852.63unnamed protein product [Vitrella brassicaformis C... [more]
XP_014152214.13.900e-7853.99hypothetical protein SARC_09248 [Sphaeroforma arct... [more]
CBJ32448.12.500e-7756.27conserved unknown protein [Ectocarpus siliculosus][more]
XP_005827532.13.300e-7754.18hypothetical protein GUITHDRAFT_158297 [Guillardia... [more]
XP_001697915.18.900e-7553.68predicted protein [Chlamydomonas reinhardtii][more]
PNW71548.18.900e-7553.68hypothetical protein CHLRE_16g658850v5 [Chlamydomo... [more]
GAX21425.11.500e-7449.16hypothetical protein FisN_10Hu003 [Fistulifera sol... [more]
XP_004987768.11.300e-7352.90MC family transporter [Salpingoeca rosetta] >EGD81... [more]
XP_002185866.11.300e-7350.00predicted protein [Phaeodactylum tricornutum CCAP ... [more]
PSC76543.12.400e-7250.86mitochondrial carrier [Micractinium conductrix][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009483NSK009483Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03380.1NO04G03380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579116gene_2114Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g51gene1878Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03380.1NO04G03380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03380 ID=NO04G03380|Name=NO04G03380|organism=Nannochloropsis oceanica|type=gene|length=1622bp
ATGCAACCTAAGCGGCAAGTGATTGGCCTCTTTTTGTGGTTGGCGGGCTG
TAGCAGTGCGTTCAAGGCCCGTACCAAGCTCCAAAGCAGCTCCCACATCC
AGCGCCTTCCCTCAGTCTGCACACATCATCACGGACCTCAACATATACTT
GGACACCTCCATCAACAAAACTTCCGCGACAAGTACCAAATCGAGGAGAA
ACCCGGCGATGCTCCTTTCCTAGACCTCTCCGGTCCCCCTTCCTCATCGG
TCCCCGACACTTTTCTTTTATGGCTTGATTTGCTGATACCTGGTTCTTGC
TTCGCCTTGACCCTCGTCGCATTATGCCTAGTGGACACGGCCGTCATGGA
CTGTTGGCCGGCACCCGCTAATGCCGCGGCGGTGGGCGTGGCAATTACAG
ATATGTCCTCAGTCAAAGATCTTGACGTTTCCGATATTTTGCAAAAAGCG
GGCAGAAAGGCGATAGGGGGCGGCTTGTCAGGAGCAGCAGCGTCCCTTGT
GCAGCTCGTGACGTTAATGTGGCTGAGGACGACGATGCAATTCCAGTATA
GATATGGCTTCTCCTTCAAGGAATCATTGGTGAAACTTTACAAAGAGGGC
GGACTTCCTCGATTTTATCGAGGCTTGCCGGTGGCGACGTTGCAACTCCC
TCTCTCTCGTTTTGGTGATGTGGCAGCCAATGCCTTTATGCTTCTTGCCC
TGGATTCGTTCGACTCGACCCGCGGTCTGCCCCTACCAGTCAAGAGTATC
TTTGGCAGTCTCGCGGCTGGGGCTTTCCGCTTTATGCTTATGCCATTGGA
TGCCGTCAAGACCTCTTTGCAAgtatgtaacgcagccattccgtttcata
tcataatcttggtagcccctttgttttgctcggttccccttcatctagca
attctaccaacaattgggtcgtcattttcccacaatattttcaaccagGT
ACAAGGTTCAAAAGGTTGGTCTCAGGTCAAGGCACGCCTGCAAGAGGAAG
GGGTCTCCTCCCTATATCAAGGCGCGGTCGCTCAAGCTGTAGCTACTTTT
GTCGGCCATTGGCCCTTTTTTGTGACATTCAACTACATGTCCTCCGTGAT
TTTGCTTCCACCCGCCGACGCTGTCTTTCTGCGATTGGGAAGGAATGCCA
TTCTAGgtaaagatgataaatttagaagtggacttttgcatcttttgtta
gcagcaaatcaaaagcaagagcattcttcttactacgtacttttttcttt
catggacctacagGCTTGTGCTCCTCCACGGTGTCGGACATGTGTTCCAA
TAGCTTTCGGGTCATCAAAACCACCAAACAAACATCCGAATCGCAAATTA
CCTACCGGGAGGCCTTGCGCCAGGTGCTGGACCAAGATGGTGTCAAGGGG
TTGTTTGGCCGAGGCTTGCAGACGAGgtgtggatgcaggaaaggataagt
gggctgatggtcatgtctgtgcaggactctgcaatcacaataattttcat
ctccgcaaatacattcattttaatacatgcacagGCTGGCGGCCAATGCG
CTGCAGGGGATGATATTTTCGGTTGTTTGGAGGTATCTAGAAGAGTCGCA
AATTCTGTTTGGGGGGAAATGA
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protein sequence of NO04G03380.1

>NO04G03380.1-protein ID=NO04G03380.1-protein|Name=NO04G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MQPKRQVIGLFLWLAGCSSAFKARTKLQSSSHIQRLPSVCTHHHGPQHIL
GHLHQQNFRDKYQIEEKPGDAPFLDLSGPPSSSVPDTFLLWLDLLIPGSC
FALTLVALCLVDTAVMDCWPAPANAAAVGVAITDMSSVKDLDVSDILQKA
GRKAIGGGLSGAAASLVQLVTLMWLRTTMQFQYRYGFSFKESLVKLYKEG
GLPRFYRGLPVATLQLPLSRFGDVAANAFMLLALDSFDSTRGLPLPVKSI
FGSLAAGAFRFMLMPLDAVKTSLQVQGSKGWSQVKARLQEEGVSSLYQGA
VAQAVATFVGHWPFFVTFNYMSSVILLPPADAVFLRLGRNAILGLCSSTV
SDMCSNSFRVIKTTKQTSESQITYREALRQVLDQDGVKGLFGRGLQTRLA
ANALQGMIFSVVWRYLEESQILFGGK*
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Synonyms
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