NO04G03330, NO04G03330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03330 vs. NCBI_GenBank
Match: OEU16235.1 (hypothetical protein FRACYDRAFT_238823 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 73.9 bits (180), Expect = 8.400e-10 Identity = 44/156 (28.21%), Postives = 72/156 (46.15%), Query Frame = 0 Query: 148 TPVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATG-------------------------------------ILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALG 267 T + E + R M+++YG + + TY VYV T+ LF ++SG+ LD+ +++ +G LE YSW++P +Q NP NF +AWI+TKFTEP+R+ + + + P IA+ +G Sbjct: 180 TKLTERKPNKQSFRSMLRQYGPIFIGTYGVVYVSTVFGLFMGIQSGI------LDATSIMDYLSGTAXXXXXXXXXXXXXXXXXXXXNTIQSAASTMTYMVEFLEYYSWTKPLAPIVQENPWTANFGIAWIMTKFTEPIRLGLAVAVTPSIAKKIG 329
BLAST of NO04G03330 vs. NCBI_GenBank
Match: CCA16393.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-9 Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 0 Query: 157 IGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSG----------WLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAPAR 272 + + + + ++YG VA+ TY +Y LG ++ ++E+G+ + + S K + E Y ++ +++ + N G+F +AW+ TKFTEP+R+ +T+ I PRIAR LG+AP + Sbjct: 3 LNRFKDLWRKYGLVAIGTYFTMYGIVLGTIYISIENGLISKNRNVRSNKDTTTDFDVVSTTNKMIALAEDYGLAK-YLDVERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKK 126
BLAST of NO04G03330 vs. NCBI_GenBank
Match: CCI49673.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 72.0 bits (175), Expect = 3.200e-9 Identity = 38/130 (29.23%), Postives = 69/130 (53.08%), Query Frame = 0 Query: 152 EEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGV----------NPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAPAR 272 + + + + + + ++YG VA+ TY +Y LG ++ ++E+G+ D K + E Y + +++ + N G+F +AW+ TKFTEP+R+ +T+ I PRIAR LG+AP + Sbjct: 56 QSQTHLNRFKDLWRKYGLVAIGTYFTMYGIVLGSIYISIENGLISKNRNTRLNKDTTTNFDVVSTTNKMIALAEDYGLVK-YLDVERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKK 184
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_002185509.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42996.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.7 bits (169), Expect = 1.600e-8 Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 0 Query: 120 RNKSTSSRTNRSGNEKSTGEGSAVPGQATPVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWL---------VEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAP 270 R +++ RTN G+ E + PGQ+ ++ M ++YG V VVT F V+SGV D G+L V+ ++ +S ++P+ +++NP N AVAWI TKFTEPVR+ V + I P+IAR LG AP Sbjct: 173 RERASKIRTNARGH---YDEFTEHPGQSA-----RAGAKSVKAMFQQYGPVFVVTXXXXXXXXXXXXFMGVQSGV--LDPASVFGFLGQADETKDTVQLVVDFMQHHSITQPYAHVVESNPTYANLAVAWIATKFTEPVRLAVALPITPKIARYLGYAP 321
BLAST of NO04G03330 vs. NCBI_GenBank
Match: OQR90543.1 (hypothetical protein THRCLA_22538 [Thraustotheca clavata]) HSP 1 Score: 68.9 bits (167), Expect = 2.700e-8 Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 0 Query: 135 KSTGEGSAVPGQATPVVEEEGK---IGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGV------NPFDYG----LDSGWLVEKATGILEGYSWS---EPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARAL 266 +ST S V A+ V + E K GKL+ + K YG VAV TYL +Y LG ++A +E+GV P G +S + AT + ++ S +++ + N F VAW+ TKFTEP+R +T+ I PR+AR L Sbjct: 16 RSTLNRSLVRRYASNVAQAEEKPAHFGKLKALWKEYGVVAVGTYLSIYGVVLGSMYAAIETGVLSTKKEEPRKEGEPESTESSLNIVTATNKMMDWTNSIGIGQYLDIPEVNSKTSAFLVAWVATKFTEPLRFGLTLMITPRVARLL 162
BLAST of NO04G03330 vs. NCBI_GenBank
Match: CBJ30264.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.6 bits (166), Expect = 3.500e-8 Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 0 Query: 159 KLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSG----------WLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAPAR 272 +L+ + ++YGAV + TY G+Y G++ + + + GV L SG W+ + A +GY S+ A+ + A +F +AW K EPVR+L I I PR+ARALG+APA+ Sbjct: 329 RLQDLWRKYGAVGIGTYFGIYFGSIAVFYGIYDYGVLT---SLPSGGTAVIEHMQEWM-KSAPEWAQGY--SDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAK 445
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_002668190.1 (predicted protein [Naegleria gruberi] >EFC35446.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 66.6 bits (161), Expect = 1.300e-7 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0 Query: 153 EEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGK 268 +E K++ +K+YGA+ +V Y G+Y LG +F ++ GV L WL ++G+ + S+ + + N VAW+LTKFTEP+RM VT+ I P I R L K Sbjct: 340 QETVFAKIKRFVKQYGALGIVIYFGIYFLVLGTIFLLLQQGVFATKDVLQ--WL--HSSGLDKLIDMSD-----LDKSEMYANAGVAWVLTKFTEPLRMAVTLAITPSIYRLLKK 445
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_002681837.1 (DUF1279 domain-containing protein [Naegleria gruberi] >EFC49093.1 DUF1279 domain-containing protein [Naegleria gruberi]) HSP 1 Score: 66.6 bits (161), Expect = 1.300e-7 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0 Query: 153 EEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGK 268 +E K++ +K+YGA+ +V Y G+Y LG +F ++ GV L WL ++G+ + S+ + + N VAW+LTKFTEP+RM VT+ I P I R L K Sbjct: 179 QETVFAKIKRFVKQYGALGIVIYFGIYFLVLGTIFLLLQQGVFATKDVLQ--WL--HSSGLDKLIDMSD-----LDKSEMYANAGVAWVLTKFTEPLRMAVTLAITPSIYRLLKK 284
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_009524095.1 (hypothetical protein PHYSODRAFT_256309 [Phytophthora sojae] >EGZ21378.1 hypothetical protein PHYSODRAFT_256309 [Phytophthora sojae]) HSP 1 Score: 66.2 bits (160), Expect = 1.700e-7 Identity = 61/201 (30.35%), Postives = 90/201 (44.78%), Query Frame = 0 Query: 82 PRALTRNAASNLPSAVLLRTPARRFGTSMRLGSSSSGDRNKSTSSRTNRSGNEKSTGEGSAVPGQATPVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESG---VNPFDYGLDSGWLVEKATGILEGYSWS----------EPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAP 270 PRAL S++L T AR F S + S R + S + + G+ +A A P+ E +L+ + ++YG VA+ TYL +Y LG ++ ++ G N G E + W ++E + + G F +AWI TKFTEPVR+ VT+ I PRIAR LG+AP Sbjct: 18 PRALFHGLPGLPASSLLSATRARVFVQPPPRARSPTTLLTSSAGRRCSSSVPKAAEGDAAA----AEPMTHME----RLKDLWRKYGVVAIGTYLSMYGVVLGSMYLAIDQGWVRTNKRTNSKGEGQPDESFNLVTTTNKWGFVKFAEDLGVAQYLEVERVSSKTGTFLLAWIATKFTEPVRLAVTLAITPRIARLLGRAP 210
BLAST of NO04G03330 vs. NCBI_GenBank
Match: OQR80892.1 (hypothetical protein ACHHYP_17084 [Achlya hypogyna]) HSP 1 Score: 66.2 bits (160), Expect = 1.700e-7 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 150 VVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGV-----NPFDYGLDSGWLVEKATGILEG----YSWSE-----PFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIAR 264 V + +G+LR + YG VAV TYL +Y LG ++A +E+GV + D G E IL W+ +++ + N F +AW+ TKFTEP+R VT+ + PR+AR Sbjct: 54 VTTKASHVGRLRALWNEYGLVAVGTYLSIYGVVLGSMYAAIETGVLSTKKERKEGDADDG---ESPLNILTATNRMMEWTNKIGIGQYLDIPEVNSKTSAFLIAWVATKFTEPLRFAVTLMVTPRVAR 178 The following BLAST results are available for this feature:
BLAST of NO04G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03330 ID=NO04G03330|Name=NO04G03330|organism=Nannochloropsis oceanica|type=gene|length=1481bpback to top protein sequence of NO04G03330.1 >NO04G03330.1-protein ID=NO04G03330.1-protein|Name=NO04G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bpback to top Synonyms
Publications
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