NO04G03160, NO04G03160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_002969355.1 (vesicle transport v-SNARE 11 [Selaginella moellendorffii] >XP_024531552.1 vesicle transport v-SNARE 11 [Selaginella moellendorffii] >EFJ28012.1 hypothetical protein SELMODRAFT_270868 [Selaginella moellendorffii] >EFJ29443.1 hypothetical protein SELMODRAFT_146421 [Selaginella moellendorffii]) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 48/190 (25.26%), Postives = 101/190 (53.16%), Query Frame = 0 Query: 35 CSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSF---GSAKAIAEKRILIQQAPGS--------GKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIV 214 CS T ++ + LAE+ L EA+ ++ +E+E R + K ++ K+ ++++DL +L++ + A+A + L++ G G+L AT+++ RS E++ ++KR + ETED+G I+ + QR++L+ + + + +R+++N+M R ++K + +I F I +V Sbjct: 23 CSATAILSGEEKKQKLAELKSGLDEAQSLIQRMELEARSLGNSQKAVFLAKLREYKSDLTSLKKDVQKCATTDALAAREELLEAGLGDLSTSTDQRGRLLYATDKMNRSGERIKESKRTLLETEDLGVSILQDLHDQRQRLLHTRDTLYGVDDNVGKSRKILNSMARRINQNKWIMGGLISFLIAAILLV 212
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_008620752.1 (hypothetical protein SDRG_16326 [Saprolegnia diclina VS20] >EQC25810.1 hypothetical protein SDRG_16326 [Saprolegnia diclina VS20]) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 52/215 (24.19%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVFNYGVLARYR 224 +EEY L+++I+ I E+ S Y AP + + + +A ++ +++E+R ++A K+ K+ Q++ L +L + E+ L A +++GAT++L ++ ++++ A + V ETE+ GI ++ RE++ KV+ N R+ +++N M R R K L ++ F + I IV + R R Sbjct: 9 DEEYKSLAQSISVKISEI-SSYED---------APDKKRTAITHVGDLITQATQLIQQMDLEVRSLDAATKRELSKKVDQYKKSLKSLSDDLKRIREKEEENGLFGSAEARARMQGATQKLKQTGDRISAAHQTVLETEETAIGIQEELSRNREKIESTHNKVKSVNDMARAGGRILNRMSARDKRQKLILYGVMGFMILAILIVLFSTIFGRRR 213
BLAST of NO04G03160 vs. NCBI_GenBank
Match: ETI52902.1 (hypothetical protein F443_04061 [Phytophthora parasitica P1569] >ETL46178.1 hypothetical protein L916_03886 [Phytophthora parasitica] >ETM52467.1 hypothetical protein L914_03905 [Phytophthora parasitica] >ETO81605.1 hypothetical protein F444_04116 [Phytophthora parasitica P1976] >ETP22711.1 hypothetical protein F441_04040 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 50/158 (31.65%), Postives = 85/158 (53.80%), Query Frame = 0 Query: 57 LAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEK----RILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILI 211 + EA+ +K + VE+R + +K + K++ +R++L L R A+ +A + Q +L +RL +S+++L D R+V ETE+VG +++ + SQRE L+ A EKV+ET T AR+++ M R I + L I F+LI Sbjct: 49 VVEAQRCMKLMTVEVRGRQPMLRKAMQAKVNMYRDELQGLIRDLERAQLMAREGKATSSTANQTSQYERLIKNNDRLTKSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTI---FVLI 203
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_008901268.1 (hypothetical protein PPTG_08103 [Phytophthora parasitica INRA-310] >ETK92762.1 hypothetical protein L915_03943 [Phytophthora parasitica] >ETL99323.1 hypothetical protein L917_03801 [Phytophthora parasitica] >ETN13195.1 hypothetical protein PPTG_08103 [Phytophthora parasitica INRA-310] >ETP50688.1 hypothetical protein F442_04045 [Phytophthora parasitica P10297] >KUF98241.1 Vesicle transport v-SNARE 13 [Phytophthora nicotianae]) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 50/158 (31.65%), Postives = 85/158 (53.80%), Query Frame = 0 Query: 57 LAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEK----RILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILI 211 + EA+ +K + VE+R + +K + K++ +R++L L R A+ +A + Q +L +RL +S+++L D R+V ETE+VG +++ + SQRE L+ A EKV+ET T AR+++ M R I + L I F+LI Sbjct: 49 VVEAQRCMKLMTVEVRGRQPMLRKAMQAKVNMYRDELQGLIRDLERAQLMAREGKATSSTANQTSQYERLIKNNDRLTKSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTI---FVLI 203
BLAST of NO04G03160 vs. NCBI_GenBank
Match: OQR92341.1 (hypothetical protein ACHHYP_03823 [Achlya hypogyna]) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 52/215 (24.19%), Postives = 106/215 (49.30%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVFNYGVLARYR 224 +EEY L+++I+ I E+ SS +P + I D+ + +A ++ +++E+R ++A K+ K+ Q++ L +L + + E+ L A +++GAT++L ++ ++++ A + V ETE+ GI ++ RE++ K++ N R+ +++N M R R K L ++ F + I IV + R R Sbjct: 9 DEEYKSLAQSISTKISEI----SSYEDAPAQKEIDKKRTAITHVGDL-ITQATQLIQQMDLEVRSLDAATKRELSKKVDQYKKSLKSLSDDLKTIREKEEQAGLFGSAEARARMQGATQKLKQTGDRISAAHQTVLETEETAIGIQEELSRNREKIEATHSKIKSVNDMARAGGRILNRMSARDKRQKLILYGVMGFMILAIFIVLLSTIFGRRR 218
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_008901269.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI52903.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK92763.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL46179.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL99324.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM52468.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN13196.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO81606.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP22712.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP50689.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 65.5 bits (158), Expect = 2.500e-7 Identity = 49/152 (32.24%), Postives = 82/152 (53.95%), Query Frame = 0 Query: 63 QVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEK----RILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILI 211 Q+K + VE+R + +K + K++ +R++L L R A+ +A + Q +L +RL +S+++L D R+V ETE+VG +++ + SQRE L+ A EKV+ET T AR+++ M R I + L I F+LI Sbjct: 26 QMKLMTVEVRGRQPMLRKAMQAKVNMYRDELQGLIRDLERAQLMAREGKATSSTANQTSQYERLIKNNDRLTKSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTI---FVLI 174
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_012206699.1 (hypothetical protein SPRG_12563 [Saprolegnia parasitica CBS 223.65] >KDO22583.1 hypothetical protein SPRG_12563 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 65.5 bits (158), Expect = 2.500e-7 Identity = 52/215 (24.19%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVFNYGVLARYR 224 +EEY L+++I+ I E+ S Y AP + + + +A ++ +++E+R ++A K+ K+ Q++ L +L + E+ L A +++GAT++L ++ ++++ A + V ETE+ GI ++ RE++ KV+ N R+ +++N M R R K L ++ F + I IV + R R Sbjct: 9 DEEYKSLAQSISIKISEI-SSYED---------APDKKRTAITHVGDLITQATQLIQQMDLEVRSLDAATKRELSKKVDQYKKSLKSLSDDLKRIREKEEENGLFGSAEARARMQGATQKLKQTGDRISAAHQTVLETEETAIGIQEELSRNREKIEATHHKVKSVNDMARAGGRILNRMSARDKRQKLILYGVMGFMILAILIVLFSTIFGRRR 213
BLAST of NO04G03160 vs. NCBI_GenBank
Match: KXZ49317.1 (hypothetical protein GPECTOR_22g911 [Gonium pectorale]) HSP 1 Score: 65.5 bits (158), Expect = 2.500e-7 Identity = 55/210 (26.19%), Postives = 112/210 (53.33%), Query Frame = 0 Query: 26 LGSKYSSVTCSPTPAMA-----PSTLS-----RILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAK--------AIAEKRILIQQAPGS----GKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIV 214 L S+Y + C+ + ++ STLS + L+E+D+D+ EA+ +K +++E R + + ++K+ +++ DL +L+ A+ A AE + + A S ++ T +L +S E+L K+++ ETE++G GI+ + +QRE ++ + + + + AR++++NM +++K LILI V F+L I+ Sbjct: 7 LFSQYENEYCNKSTDISRKINTASTLSGDARRKKLSEVDVDIREADNIIKKMDMEARSVAPERSRNLQNKVKEYKADLASLKEQLTKARSTAGDFESARAELGLGMDYASSSQAQRDRMLSGTAKLEQSNERLQTGKKLLAETEELGTGILANLAAQRETIIHSRDTLHGADDNISKARKILSNMSRVMLQNK--LILIGVIAFLLTAII 214
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_024579568.1 (kinesin-like protein [Plasmopara halstedii] >CEG43199.1 kinesin-like protein [Plasmopara halstedii]) HSP 1 Score: 65.1 bits (157), Expect = 3.200e-7 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 57 LAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILI----QQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACL 200 + EA+ +K + VE R ++ + KI+ +R++L L R A +A + I + +L +RL++S++ L D R+V ETE+VG +++ + SQR+ L+ A EKV+ET T AR+++ M R I + L Sbjct: 181 VVEAQRSIKLMTVEARGRQPQLRRSMQTKINMYRDELQGLVRDLERALLMAREGKSISSNTNETSQYERLSKNNDRLIKSSKTLEDTHRIVAETEEVGIAVLDSLASQRQSLLGAQEKVRETGAMTIEARRILQRMTRRIITNTISL 327
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_012211747.1 (hypothetical protein SPRG_17029 [Saprolegnia parasitica CBS 223.65] >KDO17546.1 hypothetical protein SPRG_17029 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 64.3 bits (155), Expect = 5.500e-7 Identity = 52/215 (24.19%), Postives = 102/215 (47.44%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVFNYGVLARYR 224 +EEY L+++I+ I E+ S Y AP + + +A ++ +++E+R ++A K+ K+ Q++ L +L + E+ L A +++GAT++L ++ ++++ A + V ETE+ GI ++ RE++ KV+ N R+ +++N M R R K L ++ F + I IV + R R Sbjct: 9 DEEYKSLAQSISIKISEI-SSYED---------APDKKRTAITHVGDLTTQATQLIQQMDLEVRSLDAATKRELSKKVDQYKKSLKSLSDDLKRIREKEEENGLFGSAEARARMQGATQKLKQTGDRISAAHQTVLETEETAIGIQEELSRNREKIEATHHKVKSVNDMARAGGRILNRMSARDKRQKLILYGVMGFMILAILIVLFSTIFGRRR 213 The following BLAST results are available for this feature:
BLAST of NO04G03160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03160 ID=NO04G03160|Name=NO04G03160|organism=Nannochloropsis oceanica|type=gene|length=1386bpback to top protein sequence of NO04G03160.1 >NO04G03160.1-protein ID=NO04G03160.1-protein|Name=NO04G03160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
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